Revert "needed for linkedapplets_ng.html (JAL-859,JAL-469)"

This reverts commit 9740e237ec7a9accfd02aa6d21fd9be34847e214.

diff --git a/examples/plantfdx.annotations b/examples/plantfdx.annotations
deleted file mode 100644 (file)
index b4ed4a4..0000000
--- a/examples/plantfdx.annotations
+++ /dev/null
@@ -1,7 +0,0 @@
-JALVIEW_ANNOTATION
-# Created: Mon Dec 11 10:43:00 GMT 2006
-
-NO_GRAPH       Secondary Structure     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||1,E|E|E|||||2,E|E|E|E|E|E|E|E|||||3,H|H|H|H|H|||||||||||Fe|||||Fe|||Fe||4,E|E||||||5,E|E|||||||||||6,H|H|H|H||7,E||||Fe|||E|E||||9,E|E|E|E|E||||||||||
-NO_GRAPH       Iron Sulphur Contacts   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||Fe|||||Fe|||Fe||||||||||||||||||||||||||||||Fe||||||||||||||||||||||
-COLOUR Conservation    5d1500
-COLOUR Quality 560c00

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 80b01d0..8387089 100644 (file)
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -144,8 +144,7 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
     alignPanel.annotationSpaceFillerHolder.addKeyListener(this);\r
     alignPanel.alabels.addKeyListener(this);\r
     createAlignFrameWindow(embedded, title);\r
-\r
-    validate();\r
+    alignPanel.validate();\r
     alignPanel.adjustAnnotationHeight();\r
     alignPanel.paintAlignment(true);\r
   }\r