JAL-2110 warning message when routine finds non-ds sequences in the dataset (seems...
authorJim Procter <jprocter@issues.jalview.org>
Thu, 23 Jun 2016 13:12:09 +0000 (14:12 +0100)
committerJim Procter <jprocter@issues.jalview.org>
Thu, 23 Jun 2016 13:12:09 +0000 (14:12 +0100)
src/jalview/analysis/CrossRef.java

index 2c5393d..1cd6a3d 100644 (file)
@@ -801,7 +801,11 @@ public class CrossRef
           if (nxt.getDatasetSequence() != null)
           {
             System.err
-                    .println("Implementation warning: getProducts passed a dataset alignment without dataset sequences in it!");
+                    .println("Implementation warning: CrossRef initialised with a dataset alignment with non-dataset sequences in it! ("
+                            + nxt.getDisplayId(true)
+                            + " has ds reference "
+                            + nxt.getDatasetSequence().getDisplayId(true)
+                            + ")");
           }
           if (nxt == sequenceI || nxt == sequenceI.getDatasetSequence())
           {