inprogress
authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Thu, 3 Oct 2013 23:58:00 +0000 (23:58 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Thu, 3 Oct 2013 23:58:00 +0000 (23:58 +0000)
forester/test_data/phyloxml_test_t1.xml
forester/test_data/phyloxml_test_t3.xml

index 8e93470..a9b966d 100644 (file)
@@ -49,7 +49,6 @@
             <green>22</green>
             <blue>33</blue>
          </color>
-         <node_id>root id</node_id>
          <taxonomy>
             <id provider="ncbi">1</id>
             <code>ECDYS</code>
                <green>14</green>
                <blue>16</blue>
             </color>
-            <node_id provider="nodeid">a id</node_id>
             <taxonomy>
                <id provider="ncbi">123</id>
                <code>CAEEL</code>
index e2d0212..75b5da4 100644 (file)
@@ -7,12 +7,10 @@
    <phylogeny rooted="true">
       <date>2008-12-12T12:12:12</date>
       <clade>
-         <node_id>a</node_id>
          <clade id_source="ab">
             <branch_length>0.2</branch_length>
             <confidence type="ml">0.99</confidence>
             <confidence type="prob">0.89</confidence>
-            <node_id>c</node_id>
             <sequence id_source="s1">
                <name>bax</name>
                <mol_seq>acgtddd</mol_seq>
@@ -26,7 +24,6 @@
          <clade>
             <name>223</name>
             <branch_length>0.1</branch_length>
-            <node_id>b</node_id>
             <taxonomy>
                <code>QWERT</code>
             </taxonomy>