new appletlib path for jars specific to the applet

diff --git a/build.xml b/build.xml
index eb1a0a5..ae3dcec 100755 (executable)
--- a/build.xml
+++ b/build.xml
@@ -467,7 +467,7 @@
     srcdir="${sourceDir}" 
     destdir="${outputDir}"
        debug="${javac.debug}"
-    classpath="lib/${jmolJar}"
+    classpath="appletlib/${jmolJar}"
        includes="jalview/appletgui/**"
        excludes="ext/**,MCview/**,org/**,vamsas/**"
        />
@@ -500,7 +500,7 @@
 
                                <path id="obfuscateDeps.path">
                                        <pathelement location="${applet.jre.tools}"/>
-                                       <pathelement location="lib/${jmolJar}"/>
+                                       <pathelement location="appletlib/${jmolJar}"/>
                                </path>
                                <taskdef resource="proguard/ant/task.properties" classpath="utils/proguard.jar" />
 
@@ -607,7 +607,7 @@
                                                <include name="${libDir}/**/*"/>
                                                <include name="${resourceDir}/**/*"/>
                                                <include name="${helpDir}/**/*"/>
-                                               <include name="${jmolJar}"/>
+                                               <include name="appletlib/${jmolJar}"/>
                                                <exclude name="**/*locales"/>
                                                <exclude name="*locales/**"/>
                                                <exclude name="utils/InstallAnywhere/**Build.iap_xml"/>