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authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Sat, 29 Sep 2012 05:13:26 +0000 (05:13 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Sat, 29 Sep 2012 05:13:26 +0000 (05:13 +0000)
forester/ruby/evoruby/lib/evo/io/parser/hmmscan_domain_extractor.rb patch | blob | history

diff --git a/forester/ruby/evoruby/lib/evo/io/parser/hmmscan_domain_extractor.rb b/forester/ruby/evoruby/lib/evo/io/parser/hmmscan_domain_extractor.rb
index 6abdc23..a2a1ee0 100644 (file)
--- a/forester/ruby/evoruby/lib/evo/io/parser/hmmscan_domain_extractor.rb
+++ b/forester/ruby/evoruby/lib/evo/io/parser/hmmscan_domain_extractor.rb
@@ -135,9 +135,9 @@ module Evoruby
                 if ( ( e_value_threshold < 0.0 ) || ( prev_i_e_value <= e_value_threshold  ) ) &&
                    ( ( length_threshold <= 0 )   || (  ( prev_env_to - prev_env_from + 1 ) >= length_threshold.to_f    ) )
 
-                  if prev_sequence && sequence != prev_sequence
-                    prev_is_pair = false
-                  end
+               #   if prev_sequence && sequence != prev_sequence
+               #     prev_is_pair = false
+               #   end
 
                   if out_of == 1