Edited wiki page forester through web user interface.
authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Thu, 3 Nov 2011 05:29:16 +0000 (05:29 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Thu, 3 Nov 2011 05:29:16 +0000 (05:29 +0000)
wiki/forester.wiki

index b91fa7a..f74ebcf 100644 (file)
@@ -291,17 +291,16 @@ public class phylo2graphics {
 
     public static void main(final String[] args) {
        try {
-       Configuration config = new Configuration();
-       // Could also read a configuration file with:
-       // Configuration config = new Configuration("my_configuration_file.txt", false, false, false);
-       config.putDisplayColors(TreeColorSet.BACKGROUND, new Color(255, 255, 255));
-       config.putDisplayColors(TreeColorSet.BRANCH, new Color(0, 0, 0));
-       config.putDisplayColors(TreeColorSet.TAXONOMY, new Color(0, 0, 0));
-                       
-     
-     config.setPhylogenyGraphicsType(Options.PHYLOGENY_GRAPHICS_TYPE.RECTANGULAR);
-
-       AptxUtil.writePhylogenyToGraphicsFileNonInteractive(new File(
+           Configuration config = new Configuration();
+           // Could also read a configuration file with:
+           // Configuration config = new Configuration("my_configuration_file.txt", false, false, false);
+           config.putDisplayColors(TreeColorSet.BACKGROUND, new Color(255, 255, 255));
+           config.putDisplayColors(TreeColorSet.BRANCH, new Color(0, 0, 0));
+           config.putDisplayColors(TreeColorSet.TAXONOMY, new Color(0, 0, 0));
+          config.setPhylogenyGraphicsType(
+                Options.PHYLOGENY_GRAPHICS_TYPE.RECTANGULAR);
+
+           AptxUtil.writePhylogenyToGraphicsFileNonInteractive(new File(
                                        "/home/czmasek/tol_117_TEST.xml"), new File(
                                        "/home/czmasek/tol_117_TEST_.png"), 1000, 1000,
                                        GraphicsExportType.PNG, config);