-/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
+/*\r
+* Jalview - A Sequence Alignment Editor and Viewer\r
+* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+*\r
+* This program is free software; you can redistribute it and/or\r
+* modify it under the terms of the GNU General Public License\r
+* as published by the Free Software Foundation; either version 2\r
+* of the License, or (at your option) any later version.\r
+*\r
+* This program is distributed in the hope that it will be useful,\r
+* but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\r
+* GNU General Public License for more details.\r
+*\r
+* You should have received a copy of the GNU General Public License\r
+* along with this program; if not, write to the Free Software\r
+* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA\r
*/\r
package jalview.ws;\r
\r
\r
\r
public class MsaWSClient extends WSClient {\r
- /**
- * server is a WSDL2Java generated stub for an archetypal MsaWSI service.
+ /**\r
+ * server is a WSDL2Java generated stub for an archetypal MsaWSI service.\r
*/\r
ext.vamsas.MuscleWS server;\r
\r
// TODO: JBPNote catch timeout or other fault types explicitly\r
// For unexpected errors\r
System.err.println(WebServiceName +\r
- " Client: Failed to submit the sequences for alignment.\n" +\r
- WsURL + " : " + e.toString() + "\n");\r
+ "Client: Failed to submit the sequences for alignment (probably a server side problem)\n"\r
+ + "When contacting Server:"+WsURL + "\n" + e.toString() + "\n");\r
this.allowedServerExceptions = 0;\r
wsInfo.setStatus(wsInfo.STATE_STOPPED_SERVERERROR);\r
- wsInfo.appendProgressText("Server problems! " + e.toString() +\r
- "\nFailed to submit sequences for alignment. Just close the window\n");\r
+ wsInfo.appendProgressText("Failed to submit sequences for alignment.\n"\r
+ + "It is most likely that there is a problem with the server.\n"\r
+ + "Just close the window\n");\r
\r
// e.printStackTrace(); // TODO: JBPNote DEBUG\r
}\r