<li><!-- JAL-2385 -->Conservation shading or PID threshold lost when base colourscheme changed if slider not visible</li>
<li><!-- JAL-2547 -->Sequence features shown in tooltip for gaps before start of features</li>
<li><!-- JAL-2576 -->Very large alignments take a long time to load</li>
- <li><!-- JAL-2590 -->Cannot load Newick trees from eggnog ortholog database</li>
<li><!-- JAL-2623 -->Graduated feature colour threshold not restored to UI when feature colour is edited</li>
<li><!-- JAL-2624 -->Feature colour thresholds not respected when rendered on overview and structures when opacity at 100%</li>
<li><!-- JAL-2630 -->Structure and alignment overview update as graduate feature colour settings are modified via the dialog box</li>
<li><!-- JAL-147 -->Vertical scrollbar jumps one page-width at a time when scrolling vertically in wrapped mode.</li>
<li><!-- JAL-2034 -->Overview window doesn't always update when a group defined on the alignment is resized</li>
<li><!-- JAL-2605 -->Mouseovers on left/right scale region in wrapped view result in positional status updates</li>
+ <li><!-- JAL-2563 -->Status bar shows position for ambiguous amino acid and nucleotide symbols</li>
</ul>
<em>Application</em>
<ul>
<ul>
<li><!-- JAL-2566 -->Protein/CDS view scrolling not always in phase after a sequence motif find operation</li>
<li><!-- JAL-2550 -->Importing annotation file with rows containing just upper and lower case letters are interpreted as WUSS rna secondary structure symbols</li>
+ <li><!-- JAL-2590 -->Cannot load Newick trees from eggnog ortholog database</li>
</ul>
</div>