JAL-3474 removed all .cvsignore files stored in the repo

diff --git a/.cvsignore b/.cvsignore
deleted file mode 100644 (file)
index 51ece2d..0000000
--- a/.cvsignore
+++ /dev/null
@@ -1,58 +0,0 @@
-NOBACK
-Old_bak
-bak
-classes
-das-obert-src
-old_lib_signed
-temp
-tmpextvamsas
-.#JalviewX.jpx.1.2
-.#JalviewX.jpx.1.4
-.#JalviewX.jpx.1.7
-.#build.xml.1.23
-.#build.xml.1.24
-.#build.xml.1.25
-.#build.xml.1.27
-1
-FeatureRequests.txt
-JalviewApplet.jpx.local
-JalviewApplet_jims.jpx
-JalviewApplet_jims.jpx.local
-JalviewX.jpx.jimpCVS
-JalviewX_cvs.jpx
-JalviewX_jimsApplet.jpx
-JalviewX_jimsApplet.jpx.local
-JalviewX_jimsOwn.jpx
-JalviewX_jimsOwn.jpx.local
-Old.activation.jar
-TODO
-axis.library
-axiskeys
-jalview-jim-jalopy.xml
-jalview.html
-jalview.jpx
-jalview.jpx.local
-jalviewApplet.jar
-jalviewres.library
-javah.library
-log4j-1.2.8.jar
-minimum.library
-new.activation.jar
-prj.el
-regex.library
-test.tree
-jsrc
-keys
-Run Jalview Release.launch
-Run Jalview Release HugeMem.launch
-Run Jalview Groovy Vamsas Release (1).launch
-Run Jalview Lite From Jar (1).launch
-Run Jalview Groovy Vamsas Release.launch
-Run Jalview Lite.launch
-Run Jalview Lite From Jar.launch
-Run Jalview Questionnaire.launch
-Run Jalview Groovy Release.launch
-lib-old
-statcvs
-statcvs_out
-jp_gEHhZay.results_files

diff --git a/dist/.cvsignore b/dist/.cvsignore
deleted file mode 100644 (file)
index 00a0187..0000000
--- a/dist/.cvsignore
+++ /dev/null
@@ -1,3 +0,0 @@
-?*.*
-*.jar
-*.jnlp

diff --git a/help/help/html/.cvsignore b/help/help/html/.cvsignore
deleted file mode 100644 (file)
index 085e8ba..0000000
--- a/help/help/html/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-Thumbs.db

diff --git a/help/help/html/colourSchemes/.cvsignore b/help/help/html/colourSchemes/.cvsignore
deleted file mode 100644 (file)
index 085e8ba..0000000
--- a/help/help/html/colourSchemes/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-Thumbs.db

diff --git a/help/help/html/editing/.cvsignore b/help/help/html/editing/.cvsignore
deleted file mode 100644 (file)
index 085e8ba..0000000
--- a/help/help/html/editing/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-Thumbs.db

diff --git a/help/help/html/features/.cvsignore b/help/help/html/features/.cvsignore
deleted file mode 100644 (file)
index 085e8ba..0000000
--- a/help/help/html/features/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-Thumbs.db

diff --git a/help/help/html/io/.cvsignore b/help/help/html/io/.cvsignore
deleted file mode 100644 (file)
index 085e8ba..0000000
--- a/help/help/html/io/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-Thumbs.db

diff --git a/help/help/html/misc/.cvsignore b/help/help/html/misc/.cvsignore
deleted file mode 100644 (file)
index 085e8ba..0000000
--- a/help/help/html/misc/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-Thumbs.db

diff --git a/help/help/html/webServices/.cvsignore b/help/help/html/webServices/.cvsignore
deleted file mode 100644 (file)
index 085e8ba..0000000
--- a/help/help/html/webServices/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-Thumbs.db

diff --git a/resources/.cvsignore b/resources/.cvsignore
deleted file mode 100644 (file)
index 43d40c0..0000000
--- a/resources/.cvsignore
+++ /dev/null
@@ -1,2 +0,0 @@
-axisCommons
-jalview_mapping.xml

diff --git a/resources/images/.cvsignore b/resources/images/.cvsignore
deleted file mode 100644 (file)
index 1d13d05..0000000
--- a/resources/images/.cvsignore
+++ /dev/null
@@ -1,10 +0,0 @@
-dna.gif
-dna1.gif
-dna2.gif
-dna3.gif
-dna4.gif
-dna5.gif
-dna6.gif
-dna7.gif
-dna8.gif
-dna9.gif

diff --git a/schemas/.cvsignore b/schemas/.cvsignore
deleted file mode 100644 (file)
index 83ef99a..0000000
--- a/schemas/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-.#jalview.xsd.1.5
\ No newline at end of file

diff --git a/src/MCview/.cvsignore b/src/MCview/.cvsignore
deleted file mode 100644 (file)
index 5ee52a6..0000000
--- a/src/MCview/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-.#PDBViewer.java.1.3
\ No newline at end of file

diff --git a/src/jalview/.cvsignore b/src/jalview/.cvsignore
deleted file mode 100644 (file)
index f436451..0000000
--- a/src/jalview/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-vamsas
\ No newline at end of file

diff --git a/src/jalview/analysis/.cvsignore b/src/jalview/analysis/.cvsignore
deleted file mode 100644 (file)
index 33989c8..0000000
--- a/src/jalview/analysis/.cvsignore
+++ /dev/null
@@ -1,3 +0,0 @@
-.#NJTree.java.1.22
-.#NJTree.java.1.23
-.#SeqsetUtils.java.1.8

diff --git a/src/jalview/datamodel/.cvsignore b/src/jalview/datamodel/.cvsignore
deleted file mode 100644 (file)
index a4d99ef..0000000
--- a/src/jalview/datamodel/.cvsignore
+++ /dev/null
@@ -1,5 +0,0 @@
-.#Alignment.java.1.41
-.#Alignment.java.1.42
-.#Alignment.java.1.43
-.#Alignment.java.1.44
-.#AlignmentI.java.1.21

diff --git a/src/jalview/gui/.cvsignore b/src/jalview/gui/.cvsignore
deleted file mode 100644 (file)
index a1659ce..0000000
--- a/src/jalview/gui/.cvsignore
+++ /dev/null
@@ -1,11 +0,0 @@
-.#AlignViewport.java.1.62
-.#AlignViewport.java.1.63
-.#AnnotationPanel.java.1.57
-.#FeatureRenderer.java.1.22
-.#OverviewPanel.java.1.26
-.#Preferences.java.1.26
-.#Preferences.java.1.28
-.#Preferences.java.1.29
-.#SequenceFetcher.java.1.23
-.#SequenceFetcher.java.1.24
-.#TreePanel.java.1.33

diff --git a/src/jalview/io/.cvsignore b/src/jalview/io/.cvsignore
deleted file mode 100644 (file)
index 485d807..0000000
--- a/src/jalview/io/.cvsignore
+++ /dev/null
@@ -1,2 +0,0 @@
-.#DasSequenceFeatureFetcher.java.1.17
-cli

diff --git a/src/jalview/jbgui/.cvsignore b/src/jalview/jbgui/.cvsignore
deleted file mode 100644 (file)
index 1cb80c3..0000000
--- a/src/jalview/jbgui/.cvsignore
+++ /dev/null
@@ -1,3 +0,0 @@
-#GPreferences.java#
-.#GPreferences.java.1.20
-.#GPreferences.java.1.22

diff --git a/src/jalview/util/.cvsignore b/src/jalview/util/.cvsignore
deleted file mode 100644 (file)
index c5b8965..0000000
--- a/src/jalview/util/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-InstanceDiscoverer.java
\ No newline at end of file

diff --git a/src/jalview/ws/.cvsignore b/src/jalview/ws/.cvsignore
deleted file mode 100644 (file)
index be25ffb..0000000
--- a/src/jalview/ws/.cvsignore
+++ /dev/null
@@ -1,3 +0,0 @@
-.#JPredClient.java.1.25
-.#JPredClient.java.1.31
-.#MsaWSClient.java.1.26

diff --git a/utils/.cvsignore b/utils/.cvsignore
deleted file mode 100644 (file)
index 823caeb..0000000
--- a/utils/.cvsignore
+++ /dev/null
@@ -1,2 +0,0 @@
-help2Website.class
-getJavaVersion.class

diff --git a/utils/InstallAnywhere/.cvsignore b/utils/InstallAnywhere/.cvsignore
deleted file mode 100644 (file)
index a44ca6b..0000000
--- a/utils/InstallAnywhere/.cvsignore
+++ /dev/null
@@ -1 +0,0 @@
-Jalview_modified.iap_xml