JAL-629 fixes to help docs
authorBen Soares <b.soares@dundee.ac.uk>
Thu, 18 May 2023 15:27:30 +0000 (16:27 +0100)
committerBen Soares <b.soares@dundee.ac.uk>
Thu, 18 May 2023 15:27:30 +0000 (16:27 +0100)
help/help/help.jhm
help/help/helpTOC.xml
help/help/html/features/clarguments-old.html

index 8e609a6..0c39a52 100755 (executable)
@@ -69,6 +69,7 @@
    <mapID target="clarguments-basic" url="html/features/clarguments-basic.html"/>
    <mapID target="clarguments-advanced" url="html/features/clarguments-advanced.html"/>
    <mapID target="clarguments-argfiles" url="html/features/clarguments-argfiles.html"/>
+   <mapID target="clarguments-old" url="html/features/clarguments-old.html"/>
    <mapID target="jvlfiles" url="html/features/jvlfiles.html"/>
    <mapID target="io" url="html/io/index.html"/>
    <mapID target="io.modellerpir" url="html/io/modellerpir.html"/>
index 433139d..f6bb7c7 100755 (executable)
                        <tocitem text="Command Line: basic usage" target="clarguments-basic" />
                        <tocitem text="Command Line: advanced usage" target="clarguments-advanced" />
                        <tocitem text="Command Line: argument files" target="clarguments-argfiles" />
+                       <tocitem text="Command Line: old command line arguments" target="clarguments-old" />
                </tocitem>
                <tocitem text="Memory Settings" target="memory" expand="false"/>
                <tocitem text="Jalview Launch Files" target="jvlfiles" expand="false"/>
index c0f4c42..3d90a9e 100644 (file)
  * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  -->
-<title>Jalview Command Line Arguments</title>
+<title>Jalview Command Line Arguments (pre 2.11.3.0)</title>
 <body>
   <p>
-    <strong>The Jalview Executable's Command Line Arguments</strong>
+    <strong>The Jalview Executable's Command Line Arguments (pre 2.11.3.0)</strong>
   </p>
+
+  <table border="1">
+  <tr><td>
+  <em>
+  This page describes the command line arguments used pre 2.11.3.0 (released mid 2023).
+  <br/>
+  Whilst these arguments will be supported for some versions after 2.11.3.0, they are now deprecated
+  and will be removed at some time in the future.
+  </em>
+  </td></tr>
+  </table>
+
+
   See
   <a href="commandline.html">running Jalview from the command line</a>
   for more information.