Edited wiki page RIO through web user interface.

diff --git a/wiki/RIO.wiki b/wiki/RIO.wiki
index a10b4eb..eb368e6 100644 (file)
--- a/wiki/RIO.wiki
+++ b/wiki/RIO.wiki
@@ -15,9 +15,9 @@ java -Xmx2048m -cp forester.jar org.forester.application.rio [options] <gene tre
 === Options ===
   * `-f=<first>` : first gene tree to analyze (0-based index)
   * `-l=<last>` : last gene tree to analyze (0-based index)
-  * -r=<re-rooting> : re-rooting method for gene trees, possible values or 'none', 'midpoint', or 'outgroup' (default: by minizming duplications)
-  * -o=<outgroup>  : for rooting by outgroup, name of outgroup (external gene tree node)
-  * -b : to use SDIR instead of GSDIR (faster, but non-binary species trees are disallowed) 
+  * `-r=<re-rooting>` : re-rooting method for gene trees, possible values or 'none', 'midpoint', or 'outgroup' (default: by minizming duplications)
+  * `-o=<outgroup>` : for rooting by outgroup, name of outgroup (external gene tree node)
+  * `-b` : to use SDIR instead of GSDIR (faster, but non-binary species trees are disallowed) 
 
   
 ==== Gene trees ====