Merge branch 'develop' into features/JAL-4366_foldseek_3di_viewing
authorJim Procter <jprocter@dundee.ac.uk>
Tue, 3 Sep 2024 14:11:30 +0000 (15:11 +0100)
committerJim Procter <jprocter@dundee.ac.uk>
Tue, 3 Sep 2024 14:11:30 +0000 (15:11 +0100)
1  2 
src/jalview/analysis/scoremodels/ScoreModels.java

@@@ -83,10 -80,9 +83,10 @@@ public class ScoreModel
       * using LinkedHashMap keeps models ordered as added
       */
      models = new LinkedHashMap<>();
-     BLOSUM62 = loadScoreMatrix("scoreModel/blosum62.scm");
-     PAM250 = loadScoreMatrix("scoreModel/pam250.scm");
-     DNA = loadScoreMatrix("scoreModel/dna.scm");
-     FOLDSEEK3DI = loadScoreMatrix("scoreModel/foldseek_mat3di.scm");
+     BLOSUM62 = loadScoreMatrix("scoreModel/blosum62.scm",true);
+     PAM250 = loadScoreMatrix("scoreModel/pam250.scm",true);
+     DNA = loadScoreMatrix("scoreModel/dna.scm",true);
++    FOLDSEEK3DI = loadScoreMatrix("scoreModel/foldseek_mat3di.scm",true);
      registerScoreModel(new PIDModel());
      registerScoreModel(new FeatureDistanceModel());
      SECONDARYSTRUCTURE = loadScoreMatrix(