phylotastic hackathon at NESCENT 120608
authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Fri, 8 Jun 2012 18:29:39 +0000 (18:29 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Fri, 8 Jun 2012 18:29:39 +0000 (18:29 +0000)
forester/aptx/aptx_example_files/Tree_of_Life_2461_with_detailed_taxonomy_data.phylo.xml [new file with mode: 0644]

diff --git a/forester/aptx/aptx_example_files/Tree_of_Life_2461_with_detailed_taxonomy_data.phylo.xml b/forester/aptx/aptx_example_files/Tree_of_Life_2461_with_detailed_taxonomy_data.phylo.xml
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+<?xml version="1.0" encoding="UTF-8"?>
+<phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd" xmlns="http://www.phyloxml.org">
+<phylogeny rooted="true">
+  <id provider="Tree of Life">2461</id>
+  <clade>
+    <taxonomy>
+      <id provider="tol">2461</id>
+      <scientific_name>Cnidaria</scientific_name>
+      <synonym>cnidarians</synonym>
+      <synonym>Sea anemones, corals, jellyfish, sea pens, hydra</synonym>
+      <rank>phylum</rank>
+    </taxonomy>
+    <clade>
+      <taxonomy>
+        <id provider="tol">17634</id>
+        <scientific_name>Anthozoa</scientific_name>
+        <common_name>anthozoans</common_name>
+        <synonym>anthozoans</synonym>
+        <synonym>Sea Anemones, Corals, Sea Pens</synonym>
+        <rank>class</rank>
+      </taxonomy>
+      <clade>
+        <taxonomy>
+          <id provider="tol">17642</id>
+          <scientific_name>Alcyonaria</scientific_name>
+        </taxonomy>
+        <clade>
+          <taxonomy>
+            <id provider="tol">120149</id>
+            <scientific_name>Alcyonacea</scientific_name>
+            <common_name>soft corals</common_name>
+            <synonym>Soft corals</synonym>
+            <rank>order</rank>
+          </taxonomy>
+        </clade>
+        <clade>
+          <taxonomy>
+            <id provider="tol">120158</id>
+            <scientific_name>Heliopora</scientific_name>
+            <rank>genus</rank>
+          </taxonomy>
+        </clade>
+        <clade>
+          <taxonomy>
+            <id provider="tol">120153</id>
+            <scientific_name>Pennatulacea</scientific_name>
+            <common_name>sea pens</common_name>
+            <synonym>Sea pens and sea pansies</synonym>
+            <rank>order</rank>
+          </taxonomy>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139124</id>
+              <scientific_name>Anthoptilidae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139125</id>
+              <scientific_name>Funiculinidae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139126</id>
+              <scientific_name>Halipteridae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139127</id>
+              <scientific_name>Kophobelemnidae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139128</id>
+              <scientific_name>Protoptilidae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139129</id>
+              <scientific_name>Renillidae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139130</id>
+              <scientific_name>Umbellulidae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139132</id>
+              <scientific_name>Pennatulidae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139133</id>
+              <scientific_name>Veretillidae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">139134</id>
+              <scientific_name>Virgulariidae</scientific_name>
+              <rank>family</rank>
+            </taxonomy>
+          </clade>
+        </clade>
+        <clade>
+          <taxonomy>
+            <id provider="tol">120165</id>
+            <scientific_name>Taiaroa</scientific_name>
+            <rank>genus</rank>
+          </taxonomy>
+        </clade>
+        <clade>
+          <taxonomy>
+            <id provider="tol">120156</id>
+            <scientific_name>Telestacea</scientific_name>
+            <rank>order</rank>
+          </taxonomy>
+        </clade>
+      </clade>
+      <clade>
+        <taxonomy>
+          <id provider="tol">17643</id>
+          <scientific_name>Zoantharia</scientific_name>
+          <synonym>Sea Anemones and Corals</synonym>
+        </taxonomy>
+        <clade>
+          <taxonomy>
+            <id provider="tol">17646</id>
+          </taxonomy>
+          <clade>
+            <taxonomy>
+              <id provider="tol">17647</id>
+              <scientific_name>Ceriantharia</scientific_name>
+              <common_name>tube-dwelling anemones</common_name>
+              <rank>order</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">17648</id>
+            </taxonomy>
+            <clade>
+              <taxonomy>
+                <id provider="tol">17649</id>
+                <scientific_name>Actiniaria</scientific_name>
+                <common_name>sea anemones</common_name>
+                <synonym>Sea Anemones</synonym>
+                <rank>order</rank>
+              </taxonomy>
+              <clade>
+                <taxonomy>
+                  <id provider="tol">17691</id>
+                  <code>HALCG</code>
+                  <scientific_name>Halcurias Carlgreni</scientific_name>
+                  <common_name>Sea anemone</common_name>
+                  <rank>species</rank>
+                </taxonomy>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="tol">17673</id>
+                  <scientific_name>Nynantheae</scientific_name>
+                  <rank>suborder</rank>
+                </taxonomy>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">17710</id>
+                    <scientific_name>Edwardsiidae</scientific_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17790</id>
+                      <scientific_name>Edwardsia</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17741</id>
+                        <scientific_name>Edwardsia andresi</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17744</id>
+                        <scientific_name>Edwardsia tuberculata</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17756</id>
+                        <scientific_name>Edwardsia timida</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17762</id>
+                        <scientific_name>Edwardsia elegans</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17763</id>
+                        <scientific_name>Edwardsia sp.</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17772</id>
+                        <scientific_name>Edwardsia japonica</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17779</id>
+                        <scientific_name>Edwardsia gilbertensis</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17792</id>
+                      <scientific_name>Halcampogeton</scientific_name>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17794</id>
+                      <scientific_name>Synhalcampella</scientific_name>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17816</id>
+                      <code>NEMVE</code>
+                      <scientific_name>Nematostella vectensis</scientific_name>
+                      <common_name>Starlet sea anemone</common_name>
+                      <rank>species</rank>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17797</id>
+                      <scientific_name>Drillactis</scientific_name>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17798</id>
+                      <scientific_name>Metedwardsia</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">17707</id>
+                    <scientific_name>Boloceroidaria</scientific_name>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17954</id>
+                      <scientific_name>Boloceractis</scientific_name>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17948</id>
+                      <scientific_name>Nevadneidae</scientific_name>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">17708</id>
+                    <scientific_name>Thenaria</scientific_name>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17966</id>
+                      <scientific_name>Endomyaria</scientific_name>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">18322</id>
+                        <scientific_name>Aliciidae</scientific_name>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18667</id>
+                          <code>PHYSE</code>
+                          <scientific_name>Phyllodiscus semoni</scientific_name>
+                          <authority>Kwietniewski 1897</authority>
+                          <common_name>Night anemone</common_name>
+                          <synonym>Phyllodiscus</synonym>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18676</id>
+                          <scientific_name>Triactis producta</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">18324</id>
+                        <scientific_name>Actiniidae</scientific_name>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18342</id>
+                          <scientific_name>Actinia</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18333</id>
+                            <code>ACTEQ</code>
+                            <scientific_name>Actinia equina</scientific_name>
+                            <common_name>Beadlet anemone</common_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18340</id>
+                            <code>ACTTE</code>
+                            <scientific_name>Actinia tenebrosa</scientific_name>
+                            <common_name>Australian red waratah sea anemone</common_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18393</id>
+                          <scientific_name>Actinia sulcata</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18349</id>
+                          <scientific_name>Anthopleura</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18402</id>
+                            <scientific_name>Anthopleura Krebsi</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18429</id>
+                            <scientific_name>Anthopleura dowii</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18509</id>
+                          <scientific_name>Epiactis prolifera</scientific_name>
+                          <common_name>brooding anemone</common_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18634</id>
+                          <scientific_name>Urticina columbiana</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">18650</id>
+                        <scientific_name>Actinostephanus haeckeli</scientific_name>
+                        <authority>Kwietniewski 1897</authority>
+                        <synonym>Actinostephanus</synonym>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">18326</id>
+                        <scientific_name>Thalassianthidae</scientific_name>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18779</id>
+                          <code>THAAS</code>
+                          <scientific_name>Thalassianthus aster</scientific_name>
+                          <common_name>Fuzzy-tipped anemone</common_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18777</id>
+                          <code>CRYAD</code>
+                          <scientific_name>Cryptodendrum adhaesivum</scientific_name>
+                          <authority>Klunzinger 1877</authority>
+                          <common_name>Adhesive sea anemone</common_name>
+                          <synonym>Cryptodendrum</synonym>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17967</id>
+                      <scientific_name>Mesomyaria</scientific_name>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">18786</id>
+                        <scientific_name>Isanthus capensis</scientific_name>
+                        <authority>Carlgren 1938</authority>
+                        <synonym>Isanthus</synonym>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">18824</id>
+                        <scientific_name>Hormosoma scotti</scientific_name>
+                        <authority>Stephenson 1918</authority>
+                        <synonym>Hormosoma</synonym>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">17968</id>
+                      <scientific_name>Acontiaria</scientific_name>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17973</id>
+                        <scientific_name>Hormathiidae</scientific_name>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18124</id>
+                          <scientific_name>Allantactis parasitica</scientific_name>
+                          <authority>Danielssen 1890</authority>
+                          <synonym>Allantactis</synonym>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18089</id>
+                          <scientific_name>Calliactis japonica</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17974</id>
+                        <scientific_name>Sagartiomorphidae</scientific_name>
+                        <authority>Kwietniewski 1897</authority>
+                        <synonym>Sagartiomorphidae</synonym>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">18286</id>
+                        <scientific_name>Phellia gausapata</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">17997</id>
+                        <scientific_name>Aiptasia</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">17992</id>
+                          <scientific_name>Aiptasia insignis</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">17994</id>
+                          <code>AIPPU</code>
+                          <scientific_name>Aiptasia pulchella</scientific_name>
+                          <common_name>Tropical sea anemone</common_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">18031</id>
+                        <scientific_name>Diadumene cincta</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                </clade>
+              </clade>
+            </clade>
+            <clade>
+              <taxonomy>
+                <id provider="tol">17650</id>
+                <scientific_name>Corallimorpharia</scientific_name>
+                <rank>order</rank>
+              </taxonomy>
+            </clade>
+            <clade>
+              <taxonomy>
+                <id provider="tol">17653</id>
+                <scientific_name>Scleractinia</scientific_name>
+                <common_name>stony corals</common_name>
+                <synonym>Stony star corals</synonym>
+                <rank>order</rank>
+              </taxonomy>
+              <clade>
+                <taxonomy>
+                  <id provider="tol">19109</id>
+                  <scientific_name>Fungioidea</scientific_name>
+                </taxonomy>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19112</id>
+                    <scientific_name>Fungiidae</scientific_name>
+                    <common_name>mushroom corals</common_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19116</id>
+                    <scientific_name>Micrabaciidae</scientific_name>
+                    <authority>Vaughan 1905</authority>
+                    <rank>family</rank>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19123</id>
+                      <scientific_name>Letepsammia</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19124</id>
+                      <scientific_name>Stephanophyllia</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19125</id>
+                      <scientific_name>Rhombopsammia</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="tol">19078</id>
+                  <scientific_name>Favioidea</scientific_name>
+                </taxonomy>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19081</id>
+                    <scientific_name>Faviidae</scientific_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19144</id>
+                    <scientific_name>Astrangia</scientific_name>
+                    <rank>genus</rank>
+                  </taxonomy>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19127</id>
+                    <scientific_name>Oculininae</scientific_name>
+                    <authority>Gray 1847</authority>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19130</id>
+                      <scientific_name>Oculina</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19135</id>
+                      <scientific_name>Cyathelia</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19136</id>
+                      <scientific_name>Madrepora</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19085</id>
+                    <scientific_name>Merulinidae</scientific_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19086</id>
+                    <scientific_name>Mussidae</scientific_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19087</id>
+                    <scientific_name>Pectinidae</scientific_name>
+                    <common_name>scallops</common_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19088</id>
+                    <scientific_name>Anthemiphyllia</scientific_name>
+                    <authority>Pourtal&amp;egrave;s 1878</authority>
+                    <synonym>Anthemiphylliidae</synonym>
+                    <rank>genus</rank>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">18915</id>
+                      <scientific_name>Anthemiphyllia spinifera</scientific_name>
+                      <rank>species</rank>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">18918</id>
+                      <scientific_name>Anthemiphyllia patera</scientific_name>
+                      <rank>species</rank>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">18919</id>
+                      <scientific_name>Anthemiphyllia dentata</scientific_name>
+                      <rank>species</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="tol">19161</id>
+                  <scientific_name>Caryophylliina</scientific_name>
+                  <rank>suborder</rank>
+                </taxonomy>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19019</id>
+                    <scientific_name>Caryophyllioidea</scientific_name>
+                    <authority>Dana 1846</authority>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19023</id>
+                      <scientific_name>Caryophylliidae</scientific_name>
+                      <authority>Dana 1846</authority>
+                      <rank>family</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">18925</id>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18926</id>
+                          <scientific_name>Caryophylliidae Genus group 1</scientific_name>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18927</id>
+                            <scientific_name>Caryophyllia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18932</id>
+                            <scientific_name>Crispatotrochus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18942</id>
+                            <scientific_name>Trochocyathus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18944</id>
+                            <scientific_name>Tethocyathus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18947</id>
+                            <scientific_name>Deltocyathus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18949</id>
+                            <scientific_name>Paracyathus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18950</id>
+                            <scientific_name>Polycyathus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18951</id>
+                            <scientific_name>Phyllangia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18956</id>
+                            <scientific_name>Ceratotrochus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18962</id>
+                            <scientific_name>Stephanocyathus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18963</id>
+                            <scientific_name>Vaughanella</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18969</id>
+                          <scientific_name>Caryophylliidae Genus group 2</scientific_name>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18970</id>
+                            <scientific_name>Desmophyllum</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18971</id>
+                            <scientific_name>Thalamophyllia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18972</id>
+                            <scientific_name>Dactylotrochus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18973</id>
+                            <scientific_name>Hoplangia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18974</id>
+                            <scientific_name>Lophelia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">18982</id>
+                          <scientific_name>Caryophylliidae Genus group 4</scientific_name>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18992</id>
+                            <scientific_name>Rhizosmilia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18995</id>
+                            <scientific_name>Solenosmilia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">18998</id>
+                            <scientific_name>Dasmosmilia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19006</id>
+                        <scientific_name>Caryophylliidae Genus group 5</scientific_name>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19007</id>
+                          <scientific_name>Eusmilia</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19008</id>
+                          <scientific_name>Euphyllia</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19009</id>
+                          <scientific_name>Cladocora</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19010</id>
+                          <scientific_name>Plerogyra</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19011</id>
+                          <scientific_name>Physogyra</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19015</id>
+                          <scientific_name>Catalaphyllia</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19024</id>
+                      <scientific_name>Turbinoliidae</scientific_name>
+                      <authority>Milne Edwards and Haime 1848</authority>
+                      <rank>family</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19172</id>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19173</id>
+                          <scientific_name>Tropidocyathus</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19174</id>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">19176</id>
+                            <scientific_name>Cyathotrochus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">19179</id>
+                            <scientific_name>Notocyathus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19202</id>
+                        <scientific_name>Conotrochus</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19020</id>
+                    <scientific_name>Flabelloidea</scientific_name>
+                    <authority>Bourne 1905</authority>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19103</id>
+                      <scientific_name>Flabellidae</scientific_name>
+                      <authority>Bourne 1905</authority>
+                      <rank>family</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19090</id>
+                        <scientific_name>Flabellum</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19091</id>
+                        <scientific_name>Truncatoflabellum</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19093</id>
+                        <scientific_name>Placotrochus</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19094</id>
+                        <scientific_name>Javania</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19095</id>
+                        <scientific_name>Placotrochides</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19097</id>
+                        <scientific_name>Monomyces</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19098</id>
+                        <scientific_name>Rhizotrochus</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19104</id>
+                      <scientific_name>Guynia annulata</scientific_name>
+                      <synonym>Guyniidae</synonym>
+                      <rank>species</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="tol">19163</id>
+                  <scientific_name>Meandriina</scientific_name>
+                  <rank>suborder</rank>
+                </taxonomy>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="tol">19029</id>
+                </taxonomy>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19031</id>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19032</id>
+                      <scientific_name>Balanophyllia</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19036</id>
+                      <scientific_name>Heteropsammia</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="tol">19045</id>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19046</id>
+                      <scientific_name>Leptopsammia</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="tol">19047</id>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19051</id>
+                        <scientific_name>Endopachys</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="tol">19053</id>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19055</id>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">19056</id>
+                            <scientific_name>Rhizopsammia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">19057</id>
+                            <scientific_name>Cladopsammia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">19060</id>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="tol">19061</id>
+                              <scientific_name>Astroides</scientific_name>
+                              <rank>genus</rank>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="tol">19063</id>
+                              <scientific_name>Tubastraea</scientific_name>
+                              <rank>genus</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="tol">19065</id>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">19066</id>
+                            <scientific_name>Dendrophyllia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="tol">19068</id>
+                            <scientific_name>Enallopsammia</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                  </clade>
+                </clade>
+              </clade>
+            </clade>
+          </clade>
+        </clade>
+        <clade>
+          <taxonomy>
+            <id provider="tol">17659</id>
+          </taxonomy>
+          <clade>
+            <taxonomy>
+              <id provider="tol">17660</id>
+              <scientific_name>Antipatharia</scientific_name>
+              <common_name>black corals</common_name>
+              <rank>order</rank>
+            </taxonomy>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="tol">17661</id>
+              <scientific_name>Zoanthidea</scientific_name>
+              <common_name>zoanthids</common_name>
+              <rank>order</rank>
+            </taxonomy>
+          </clade>
+        </clade>
+      </clade>
+    </clade>
+    <clade>
+      <taxonomy>
+        <id provider="tol">17637</id>
+      </taxonomy>
+      <clade>
+        <taxonomy>
+          <id provider="tol">17638</id>
+          <scientific_name>Cubozoa</scientific_name>
+          <common_name>sea wasps</common_name>
+          <rank>class</rank>
+        </taxonomy>
+      </clade>
+      <clade>
+        <taxonomy>
+          <id provider="tol">17639</id>
+          <scientific_name>Scyphozoa</scientific_name>
+          <common_name>jellyfishes</common_name>
+          <rank>class</rank>
+        </taxonomy>
+      </clade>
+      <clade>
+        <taxonomy>
+          <id provider="tol">17640</id>
+          <scientific_name>Hydrozoa</scientific_name>
+          <common_name>hydrozoans</common_name>
+          <rank>class</rank>
+        </taxonomy>
+      </clade>
+    </clade>
+  </clade>
+</phylogeny>
+</phyloxml>
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