JAL-4243 Updated bio.tools record for 2.11.3.0

diff --git a/utils/biotools/Jalview.json b/utils/biotools/Jalview.json
index 69aa95c..760eaa7 100644 (file)
--- a/utils/biotools/Jalview.json
+++ b/utils/biotools/Jalview.json
@@ -5,7 +5,7 @@
   "biotoolsID": "Jalview",
   "biotoolsCURIE": "biotools:Jalview",
   "version": [
-    "2.11.2.7"
+    "2.11.3.0"
   ],
   "relation": [
     {
@@ -233,11 +233,12 @@
           ]
         }
       ],
-      "note": "Other Input formats:\nAMSA (.amsa);\nJnetFile (.concise, .jnet);\nPFAM (.pfam);\nSubstitution matrix (.matrix);\nJalview Project File (.jvp);\nJalview Feature File (.features, .jvfeatures);\nJalview Annotations File (.annotations, .jvannotations);\n\n...\nOther Output formats:\nPFAM (.pfam);\nBioJS (.biojs) (interactive HTML/Javascript);\nJalview Project File (.jvp);"
+      "note": "Other Input formats:\nAMSA (.amsa);\nJnetFile (.concise, .jnet);\nPFAM (.pfam);\nSubstitution matrix (.matrix);\nJalview Project File (.jvp);\nJalview Feature File (.features, .jvfeatures);\nJalview Annotations File (.annotations, .jvannotations);\nPredicted Aligned Error (PAE) Matrix File (.json)\n...\nOther Output formats:\nPFAM (.pfam);\nBioJS (.biojs) (interactive HTML/Javascript);\nJalview Project File (.jvp);"
     }
   ],
   "toolType": [
-    "Desktop application"
+    "Desktop application",
+    "Command-line tool"
   ],
   "topic": [
     {
@@ -255,6 +256,9 @@
     "Mac"
   ],
   "license": "GPL-3.0",
+  "collectionID": [
+    "ELIXIR-UK"
+  ],
   "maturity": "Mature",
   "cost": "Free of charge",
   "accessibility": "Open access",
@@ -363,7 +367,7 @@
         "title": "Jalview Version 2-A multiple sequence alignment editor and analysis workbench",
         "abstract": "Summary: Jalview Version 2 is a system for interactive WYSIWYG editing, analysis and annotation of multiple sequence alignments. Core features include keyboard and mouse-based editing, multiple views and alignment overviews, and linked structure display with Jmol. Jalview 2 is available in two forms: a lightweight Java applet for use in web applications, and a powerful desktop application that employs web services for sequence alignment, secondary structure prediction and the retrieval of alignments, sequences, annotation and structures from public databases and any DAS 1.53 compliant sequence or annotation server. © 2009 The Author(s).",
         "date": "2009-05-07T00:00:00Z",
-        "citationCount": 5999,
+        "citationCount": 6209,
         "authors": [
           {
             "name": "Waterhouse A.M."
@@ -403,7 +407,7 @@
   ],
   "owner": "ben_s",
   "additionDate": "2019-02-13T17:01:40Z",
-  "lastUpdate": "2023-07-22T09:24:44.755337Z",
+  "lastUpdate": "2023-11-16T19:51:39.349417Z",
   "editPermission": {
     "type": "group",
     "authors": [