Put transparency back

diff --git a/src/jalview/appletgui/FeatureRenderer.java b/src/jalview/appletgui/FeatureRenderer.java
index d49fdc4..a24525e 100755 (executable)
--- a/src/jalview/appletgui/FeatureRenderer.java
+++ b/src/jalview/appletgui/FeatureRenderer.java
@@ -412,10 +412,10 @@ public class FeatureRenderer
   {\r
     void setTransparency(Graphics g, float value)\r
     {\r
-   /*  Graphics2D g2 = (Graphics2D) g;\r
- g2.setComposite(\r
+     Graphics2D g2 = (Graphics2D) g;\r
+     g2.setComposite(\r
         AlphaComposite.getInstance(\r
-             AlphaComposite.SRC_OVER, value));*/\r
+             AlphaComposite.SRC_OVER, value));\r
     }\r
   }\r
 \r