Edited wiki page GSDI through web user interface.

diff --git a/wiki/GSDI.wiki b/wiki/GSDI.wiki
index 4956a5b..93395b6 100644 (file)
--- a/wiki/GSDI.wiki
+++ b/wiki/GSDI.wiki
@@ -14,13 +14,10 @@ path/to/forester.jar org.forester.application.gsdi [-options] <gene tree in phyl
 
 === Options ===
 
-  *s : to strip the species tree prior to duplication inference
- *  -b: to use SDI algorithm instead of GSDI algorithm
- * -m: use most parimonious duplication model for GSDI: 
-     assign nodes as speciations which would otherwise be assiged
-     as unknown because of polytomies in the species tree
- * -q: to allow species tree in other formats than
-     phyloXML (Newick, NHX, Nexus)
+  * -s: to strip the species tree prior to duplication inference
+  * -b: to use SDI algorithm instead of GSDI algorithm
+  * -m: use most parimonious duplication model for GSDI: assign nodes as speciations which would otherwise be assiged as unknown because of polytomies in the species tree
+  * -q: to allow species tree in other formats than phyloXML (Newick, NHX, Nexus)