}
doFirst {
- if (false && pandoc != null && file(pandoc).exists()) {
+ if (pandoc != null && file(pandoc).exists()) {
commandLine pandoc, '-s', '-o', buildingHTML, '--metadata', 'pagetitle="Building Jalview from Source"', '--toc', '-H', css, buildingMD
} else {
println("Cannot find pandoc. Skipping convert building.md to HTML")
*
*/
public Application (EnvConfig envc) {
- _envc = envc;
- _config = getLocalPath(envc.appDir, CONFIG_FILE);
- _backupConfig = getLocalPath(new File(envc.appDir.getAbsolutePath()+File.separator+BACKUP_CONFIG_DIR), CONFIG_FILE);
+ _envc = envc;
+ _config = getLocalPath(envc.appDir, CONFIG_FILE);
+ _backupConfig = getLocalPath(envc.appDir, BACKUP_CONFIG_DIR+File.separator+CONFIG_FILE);
+ log.warning("Backup config file now", "_backupConfig", _backupConfig, "exists", _backupConfig.exists(), "isReadable", _backupConfig.canRead());
}
/**
* Returns the configured application directory.
*/
public File getAppDir () {
- return _envc.appDir;
+ return _envc.appDir;
}
/**
*/
public boolean useCodeCache ()
{
- return _useCodeCache;
+ return _useCodeCache;
}
/**
*/
public int getCodeCacheRetentionDays ()
{
- return _codeCacheRetentionDays;
+ return _codeCacheRetentionDays;
}
/**
* app files from its hosting server.
*/
public int maxConcurrentDownloads () {
- return _maxConcDownloads;
+ return _maxConcDownloads;
}
/**
public Resource getConfigResource ()
{
Resource res = null;
- try {
- res = createResource(CONFIG_FILE, Resource.NORMAL);
- } catch (Exception e) {
- log.warning("Invalid appbase '" + _vappbase + "'.", e);
- }
- if (res == null) {
- try {
- String backupConfig = BACKUP_CONFIG_DIR + File.separator + CONFIG_FILE;
- log.warning("Could not read config '"+CONFIG_FILE+"'. Attempting to use backup '"+backupConfig+"'");
- res = createResource(backupConfig, Resource.NORMAL);
- } catch (Exception ex) {
- throw new RuntimeException("Invalid appbase in backup config'" + _vappbase + "'.", ex);
- }
- }
- return res;
+ try {
+ return createResource(CONFIG_FILE, Resource.NORMAL);
+ } catch (Exception e) {
+ log.warning("Invalid appbase '" + _vappbase + "'.", e);
+ }
}
/**
*/
public List<Resource> getCodeResources ()
{
- return _codes;
+ return _codes;
}
/**
}
if (config == null || config.getString("appbase") == null || config.getString("appbase").isEmpty()) {
try {
- config = Config.parseConfig(_backupConfig, opts);
+ Config backupConfig = Config.parseConfig(_backupConfig, opts);
+ config = backupConfig;
log.warning("Using backup config file", "appdir", getAppDir(), "backupConfig", _backupConfig.getAbsoluteFile());
} catch (Exception e) {
log.warning("Failure reading backup config file", "file", _backupConfig, e);