JAL-1988 Don't put Quit in the File menu if there's a handler for it

diff --git a/src/jalview/jbgui/GDesktop.java b/src/jalview/jbgui/GDesktop.java
index 996cb1f..e046783 100755 (executable)
--- a/src/jalview/jbgui/GDesktop.java
+++ b/src/jalview/jbgui/GDesktop.java
@@ -404,7 +404,10 @@ public class GDesktop extends JFrame
     FileMenu.add(saveAsState);
     FileMenu.add(loadState);
     FileMenu.addSeparator();
-    FileMenu.add(quit);
+    if (!APQHandlers.setQuit)
+    {
+      FileMenu.add(quit);
+    }
     if (!APQHandlers.setAbout)
     {
       HelpMenu.add(aboutMenuItem);