--- /dev/null
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+ <name>Bilateria_Cnidaria</name>
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+ <name>Bilateria</name>
+ <clade>
+ <name>Deuterostomia</name>
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+ <name>Urochordata & Vertebrata</name>
+ <clade>
+ <taxonomy>
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+ <scientific_name>Vertebrata</scientific_name>
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+ <common_name>jawed vertebrates</common_name>
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+ <scientific_name>Eutheria</scientific_name>
+ <common_name>Placental mammals</common_name>
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+ <reference doi="10.1002/bies.200900053">
+ <desc>The new framework for understanding placental mammal evolution</desc>
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+ </reference>
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+ <scientific_name>Euarchontoglires</scientific_name>
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+ <scientific_name>Euarchonta</scientific_name>
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+ <scientific_name>Haplorrhini</scientific_name>
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+ <scientific_name>Simiiformes</scientific_name>
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+ <scientific_name>Catarrhini</scientific_name>
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+ <scientific_name>Hominoidea</scientific_name>
+ <common_name>Apes</common_name>
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+ <id provider="uniprot">9604</id>
+ <scientific_name>Hominidae</scientific_name>
+ <common_name>Great apes</common_name>
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+ <id provider="uniprot">207598</id>
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+ <scientific_name>Hominini</scientific_name>
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+ <taxonomy>
+ <id provider="uniprot">9606</id>
+ <code>HUMAN</code>
+ <scientific_name>Homo sapiens</scientific_name>
+ <common_name>Human</common_name>
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+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/e/e5/Steve_Jobs_WWDC07.jpg/170px-Steve_Jobs_WWDC07.jpg</uri>
+ </taxonomy>
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+ <id provider="uniprot">9598</id>
+ <code>PANTR</code>
+ <scientific_name>Pan troglodytes</scientific_name>
+ <common_name>Chimpanzee</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/8b/Schimpanse_zoo-leipig.jpg/800px-Schimpanse_zoo-leipig.jpg</uri>
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+ </clade>
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+ <taxonomy>
+ <id provider="uniprot">9595</id>
+ <code>GORGO</code>
+ <scientific_name>Gorilla gorilla gorilla</scientific_name>
+ <common_name>Western lowland gorilla</common_name>
+ <rank>subspecies</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/c/c7/Stavenn_Gorilla_gorilla_00.jpg</uri>
+ </taxonomy>
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+ <taxonomy>
+ <id provider="uniprot">9601</id>
+ <code>PONAB</code>
+ <scientific_name>Pongo abelii</scientific_name>
+ <common_name>Sumatran orangutan</common_name>
+ <synonym>Pongo pygmaeus abelii</synonym>
+ <rank>species</rank>
+ <uri>http://www.kidszoo.org/images/animals/orangutan.jpg</uri>
+ </taxonomy>
+ </clade>
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+ <taxonomy>
+ <id provider="uniprot">61853</id>
+ <code>NOMLE</code>
+ <scientific_name>Nomascus leucogenys</scientific_name>
+ <common_name>Northern white-cheeked gibbon</common_name>
+ <synonym>Hylobates leucogenys</synonym>
+ <synonym>Hylobates concolor leucogenys</synonym>
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+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/1/1b/Hylobates_concolor2.jpg/450px-Hylobates_concolor2.jpg</uri>
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+ <taxonomy>
+ <id provider="uniprot">9528</id>
+ <scientific_name>Cercopithecinae</scientific_name>
+ <rank>subfamily</rank>
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+ <id provider="uniprot">9544</id>
+ <code>MACMU</code>
+ <scientific_name>Macaca mulatta</scientific_name>
+ <common_name>Rhesus macaque</common_name>
+ <rank>species</rank>
+ <uri>http://www.biolib.cz/IMG/GAL/39329.jpg</uri>
+ </taxonomy>
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+ <taxonomy>
+ <id provider="uniprot">9557</id>
+ <code>PAPHA</code>
+ <scientific_name>Papio hamadryas</scientific_name>
+ <common_name>Hamadryas baboon</common_name>
+ <rank>species</rank>
+ <uri>http://pin.primate.wisc.edu/fs/sheets/images/227lg.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
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+ <taxonomy>
+ <id provider="uniprot">9483</id>
+ <code>CALJA</code>
+ <scientific_name>Callithrix jacchus</scientific_name>
+ <common_name>White-tufted-ear marmoset</common_name>
+ <synonym>Callithrix jacchus jacchus</synonym>
+ <rank>species</rank>
+ <uri>http://www.arthurgrosset.com/mammals/photos/caljac28086.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
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+ <taxonomy>
+ <id provider="uniprot">9478</id>
+ <code>TARSY</code>
+ <scientific_name>Tarsius syrichta</scientific_name>
+ <common_name>Philippine tarsier</common_name>
+ <rank>species</rank>
+ <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0408/1425.jpeg</uri>
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+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">376911</id>
+ <scientific_name>Strepsirrhini</scientific_name>
+ <rank>suborder</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">30611</id>
+ <code>OTOGA</code>
+ <scientific_name>Otolemur garnettii</scientific_name>
+ <common_name>Garnett's greater bushbaby</common_name>
+ <synonym>Galago garnetti</synonym>
+ <synonym>Small-eared galago</synonym>
+ <synonym>Garnett's greater bushbaby</synonym>
+ <rank>species</rank>
+ <uri>http://www.mbweni.com/images/Mbweni%20Images/naturetrail/small-earedgalago.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">30608</id>
+ <code>MICMU</code>
+ <scientific_name>Microcebus murinus</scientific_name>
+ <common_name>Lesser mouse lemur</common_name>
+ <rank>species</rank>
+ <uri>http://daniel.montagnon.pagesperso-orange.fr/images/MicrocbusMurinus.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">37347</id>
+ <code>TUPBE</code>
+ <scientific_name>Tupaia belangeri</scientific_name>
+ <common_name>Common tree shrew</common_name>
+ <synonym>Tupaia glis belangeri</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/4/44/Tupaia_belangeri.JPG/800px-Tupaia_belangeri.JPG</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">314147</id>
+ <scientific_name>Glires</scientific_name>
+ <common_name>Rodents and rabbits</common_name>
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+ <taxonomy>
+ <id provider="uniprot">9989</id>
+ <scientific_name>Rodentia</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>Ctenohystrica & Mouse-related clade</name>
+ <reference doi="10.1186/1471-2148-9-71">
+ <desc>Rodent phylogeny revised: analysis of six nuclear genes from all major rodent clades.</desc>
+ </reference>
+ <clade>
+ <taxonomy>
+ <common_name>Mouse-related clade</common_name>
+ </taxonomy>
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+ <taxonomy>
+ <id provider="uniprot">337687</id>
+ <scientific_name>Muroidea</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">39107</id>
+ <scientific_name>Murinae</scientific_name>
+ <rank>subfamily</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">10090</id>
+ <code>MOUSE</code>
+ <scientific_name>Mus musculus</scientific_name>
+ <common_name>Mouse</common_name>
+ <rank>species</rank>
+ <uri>http://www.zoologi.no/patlas/images/husmus-RS.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">10116</id>
+ <code>RAT</code>
+ <scientific_name>Rattus norvegicus</scientific_name>
+ <common_name>Rat</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/0/01/Rattus_norvegicus_1.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">10036</id>
+ <code>MESAU</code>
+ <scientific_name>Mesocricetus auratus</scientific_name>
+ <common_name>Golden hamster</common_name>
+ <rank>species</rank>
+ <uri>http://www.zipcodezoo.com/hp350/Mesocricetus_auratus_0.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">10020</id>
+ <code>DIPOR</code>
+ <scientific_name>Dipodomys ordii</scientific_name>
+ <common_name>Ord's kangaroo rat</common_name>
+ <rank>species</rank>
+ <uri>http://www.nsrl.ttu.edu/tmot1/images/dipoordi.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">10141</id>
+ <code>CAVPO</code>
+ <scientific_name>Cavia porcellus</scientific_name>
+ <common_name>Guinea pig</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/7/77/Guinea_1.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">43179</id>
+ <code>SPETR</code>
+ <scientific_name>Spermophilus tridecemlineatus</scientific_name>
+ <common_name>Thirteen-lined ground squirrel</common_name>
+ <synonym>Ictidomys tridecemlineatus</synonym>
+ <rank>species</rank>
+ <uri>http://animaldiversity.ummz.umich.edu/site/resources/phil_myers/ADW_mammals/Rodentia/Spermophilus4345.jpg/medium.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9975</id>
+ <scientific_name>Lagomorpha</scientific_name>
+ <common_name>Rabbits, hares, pikas</common_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9986</id>
+ <code>RABIT</code>
+ <scientific_name>Oryctolagus cuniculus</scientific_name>
+ <common_name>Rabbit</common_name>
+ <rank>species</rank>
+ <uri>http://www.animalpictures.tk/wp-content/uploads/pictures/pictures-of-rabbit-pictures-818.jpg</uri>
+ <uri>http://greennature.com/gallery/farm-animal-pictures/albino_rabbit.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9978</id>
+ <code>OCHPR</code>
+ <scientific_name>Ochotona princeps</scientific_name>
+ <common_name>Southern American pika</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/3/3b/Ochotona_princeps.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">314145</id>
+ <scientific_name>Laurasiatheria</scientific_name>
+ <rank>superorder</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <scientific_name>Scrotifera</scientific_name>
+ </taxonomy>
+ <clade>
+ <name>Perissodactyla & Cetartiodactyla & Chiroptera</name>
+ <clade>
+ <name>Perissodactyla & Cetartiodactyla</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">91561</id>
+ <scientific_name>Cetartiodactyla</scientific_name>
+ <common_name>Even-toed ungulates</common_name>
+ </taxonomy>
+ <clade>
+ <name>Cetruminantia & Suina</name>
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+ <taxonomy>
+ <scientific_name>Cetruminantia</scientific_name>
+ </taxonomy>
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+ <taxonomy>
+ <id provider="uniprot">9895</id>
+ <scientific_name>Bovidae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
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+ <taxonomy>
+ <id provider="uniprot">9913</id>
+ <code>BOVIN</code>
+ <scientific_name>Bos taurus</scientific_name>
+ <common_name>Bovine</common_name>
+ <synonym>Bos bovis</synonym>
+ <rank>species</rank>
+ <uri>http://www.biolib.cz/IMG/GAL/18578.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9940</id>
+ <code>SHEEP</code>
+ <scientific_name>Ovis aries</scientific_name>
+ <common_name>Sheep</common_name>
+ <rank>species</rank>
+ <uri>http://animaldiversity.ummz.umich.edu/site/resources/james_dowlinghealey/blacksheep.jpg/medium.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9721</id>
+ <scientific_name>Cetacea</scientific_name>
+ <common_name>Whales</common_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9739</id>
+ <code>TURTR</code>
+ <scientific_name>Tursiops truncatus</scientific_name>
+ <common_name>Atlantic bottle-nosed dolphin</common_name>
+ <synonym>Delphinus truncatus</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/a/a6/Bottlenose_Dolphin_KSC04pd0178.jpg/800px-Bottlenose_Dolphin_KSC04pd0178.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9771</id>
+ <code>BALMU</code>
+ <scientific_name>Balaenoptera musculus</scientific_name>
+ <common_name>Blue whale</common_name>
+ <rank>species</rank>
+ <uri>http://2.bp.blogspot.com/_W90V87w3sr8/TT63uRT_U9I/AAAAAAAAAo8/to9O8zEeo7k/s1600/bluewhale.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9823</id>
+ <code>PIG</code>
+ <scientific_name>Sus scrofa</scientific_name>
+ <common_name>Pig</common_name>
+ <rank>species</rank>
+ <uri>http://www.batraciens-reptiles.com/sus%20scrofa2.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">30538</id>
+ <code>LAMPA</code>
+ <scientific_name>Lama guanicoe pacos</scientific_name>
+ <common_name>Alpaca</common_name>
+ <synonym>Lama pacos</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/8f/A_group_of_Alpacas_on_a_property_including_cria.jpg/800px-A_group_of_Alpacas_on_a_property_including_cria.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9796</id>
+ <code>HORSE</code>
+ <scientific_name>Equus caballus</scientific_name>
+ <common_name>Horse</common_name>
+ <rank>species</rank>
+ <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0801/0088.jpeg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9397</id>
+ <scientific_name>Chiroptera</scientific_name>
+ <common_name>Bats</common_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">59463</id>
+ <code>MYOLU</code>
+ <scientific_name>Myotis lucifugus</scientific_name>
+ <common_name>Little brown bat</common_name>
+ <rank>species</rank>
+ <uri>http://biology.lakeheadu.ca/uploads/Nature_photography/brown_bat.jpg</uri>
+ </taxonomy>
+ </clade>
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+ <id provider="uniprot">132908</id>
+ <code>PTEVA</code>
+ <scientific_name>Pteropus vampyrus</scientific_name>
+ <common_name>Large flying fox</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/5/5e/Pteropus_vampyrus1.jpg/412px-Pteropus_vampyrus1.jpg</uri>
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+ <name>Carnivora</name>
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+ <id provider="uniprot">33554</id>
+ <scientific_name>Carnivora</scientific_name>
+ <rank>order</rank>
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+ <id provider="uniprot">379584</id>
+ <scientific_name>Caniformia</scientific_name>
+ <rank>suborder</rank>
+ </taxonomy>
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+ <name>CANFA</name>
+ <taxonomy>
+ <id provider="uniprot">9615</id>
+ <code>CANFA</code>
+ <scientific_name>Canis familiaris</scientific_name>
+ <common_name>Dog</common_name>
+ <synonym>Canis lupus familiaris</synonym>
+ <rank>subspecies</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/a/ab/Wikilabrador_jardin.JPG</uri>
+ </taxonomy>
+ </clade>
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+ <taxonomy>
+ <id provider="uniprot">9646</id>
+ <code>AILME</code>
+ <scientific_name>Ailuropoda melanoleuca</scientific_name>
+ <common_name>Giant panda</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/3/3c/Giant_Panda_2004-03-2.jpg/800px-Giant_Panda_2004-03-2.jpg</uri>
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+ </clade>
+ </clade>
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+ <name>FELCA</name>
+ <taxonomy>
+ <id provider="uniprot">9685</id>
+ <code>FELCA</code>
+ <scientific_name>Felis catus</scientific_name>
+ <common_name>Cat</common_name>
+ <synonym>Felis silvestris catus</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/9/9b/Domestic_cat_cropped.jpg/755px-Domestic_cat_cropped.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9362</id>
+ <scientific_name>Insectivora</scientific_name>
+ <common_name>hedgehogs, shrews, moles and others</common_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9365</id>
+ <code>ERIEU</code>
+ <scientific_name>Erinaceus europaeus</scientific_name>
+ <common_name>Western European hedgehog</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/d/d4/Igel01.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">42254</id>
+ <code>SORAR</code>
+ <scientific_name>Sorex araneus</scientific_name>
+ <common_name>Eurasian common shrew</common_name>
+ <synonym>European shrew</synonym>
+ <rank>species</rank>
+ <uri>http://www.batraciens-reptiles.com/musaraigne2.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <scientific_name>Atlantogenata</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">311790</id>
+ <scientific_name>Afrotheria</scientific_name>
+ <rank>superorder</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <scientific_name>Paenungulata</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9785</id>
+ <code>LOXAF</code>
+ <scientific_name>Loxodonta africana</scientific_name>
+ <common_name>African savanna elephant</common_name>
+ <rank>species</rank>
+ <uri>http://animaldiversity.ummz.umich.edu/site/resources/susan_hoffman/elephants.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9813</id>
+ <code>PROCA</code>
+ <scientific_name>Procavia capensis</scientific_name>
+ <common_name>Cape hyrax</common_name>
+ <synonym>Rock dassie</synonym>
+ <rank>species</rank>
+ <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/1206/0460.jpeg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9371</id>
+ <code>ECHTE</code>
+ <scientific_name>Echinops telfairi</scientific_name>
+ <common_name>Lesser hedgehog tenrec</common_name>
+ <rank>species</rank>
+ <uri>http://animaldiversity.ummz.umich.edu/site/resources/david_kupitz/etelfairi.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9348</id>
+ <scientific_name>Xenarthra</scientific_name>
+ <synonym>Edentata</synonym>
+ <rank>superorder</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9358</id>
+ <code>CHOHO</code>
+ <scientific_name>Choloepus hoffmanni</scientific_name>
+ <common_name>Hoffmann's two-fingered sloth</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/89/Sloth8.jpg/800px-Sloth8.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9361</id>
+ <code>DASNO</code>
+ <scientific_name>Dasypus novemcinctus</scientific_name>
+ <common_name>Nine-banded armadillo</common_name>
+ <rank>species</rank>
+ <uri>http://images.enature.com/mammals/mammals_l/ma0154_1l.jpg</uri>
+ <uri>http://anthropometaphors.files.wordpress.com/2008/11/nine-banded-armadillo41.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9263</id>
+ <scientific_name>Metatheria</scientific_name>
+ <common_name>Marsupials</common_name>
+ </taxonomy>
+ <distribution>
+ <point geodetic_datum="?" alt_unit="?">
+ <lat>0</lat>
+ <long>0</long>
+ <alt>0</alt>
+ </point>
+ </distribution>
+ <reference doi="10.1016/j.ympev.2004.05.004">
+ <desc>First combined cladistic analysis of marsupial mammal interrelationships</desc>
+ </reference>
+ <reference>
+ </reference>
+ <clade>
+ <name>MONDO</name>
+ <taxonomy>
+ <id provider="uniprot">13616</id>
+ <code>MONDO</code>
+ <scientific_name>Monodelphis domestica</scientific_name>
+ <common_name>Short-tailed gray opossum</common_name>
+ <rank>species</rank>
+ <uri>http://animaldiversity.ummz.umich.edu/site/resources/phil_myers/classic/monodelphis.jpg/medium.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <scientific_name>Eometatheria</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9315</id>
+ <code>MACEU</code>
+ <scientific_name>Macropus eugenii</scientific_name>
+ <common_name>Tammar wallaby</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/d/de/Macropus_eugenii.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9305</id>
+ <code>SARHA</code>
+ <scientific_name>Sarcophilus harrisii</scientific_name>
+ <common_name>Tasmanian devil</common_name>
+ <synonym>Sarcophilus laniarius</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/3/3b/Sarcophilus_harrisii_-Healesville_Sanctuary-8a.jpg/727px-Sarcophilus_harrisii_-Healesville_Sanctuary-8a.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>ORNAN</name>
+ <taxonomy>
+ <id provider="uniprot">9258</id>
+ <code>ORNAN</code>
+ <scientific_name>Ornithorhynchus anatinus</scientific_name>
+ <common_name>Duckbill platypus</common_name>
+ <rank>species</rank>
+ <uri>http://www.biolib.cz/IMG/GAL/39610.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Diapsida</name>
+ <clade>
+ <name>Neognathae</name>
+ <taxonomy>
+ <id provider="uniprot">8825</id>
+ <scientific_name>Neognathae</scientific_name>
+ <rank>superorder</rank>
+ </taxonomy>
+ <clade>
+ <name>Phasianidae & Anatidae (waterfowl)</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9005</id>
+ <scientific_name>Phasianidae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>CHICK</name>
+ <taxonomy>
+ <id provider="uniprot">9031</id>
+ <code>CHICK</code>
+ <scientific_name>Gallus gallus</scientific_name>
+ <common_name>Chicken</common_name>
+ <synonym>Gallus domesticus</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/f/f8/Rooster04_adjusted.jpg/800px-Rooster04_adjusted.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">9103</id>
+ <code>MELGA</code>
+ <scientific_name>Meleagris gallopavo</scientific_name>
+ <common_name>Common turkey</common_name>
+ <rank>species</rank>
+ <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0205/0858.jpeg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">8839</id>
+ <code>ANAPL</code>
+ <scientific_name>Anas platyrhynchos</scientific_name>
+ <common_name>Domestic duck</common_name>
+ <synonym>Anas boschas</synonym>
+ <rank>species</rank>
+ <uri>http://content.ornith.cornell.edu/UEWebApp/images/MPR_070302_100009_L.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>TAEGU</name>
+ <taxonomy>
+ <id provider="uniprot">59729</id>
+ <code>TAEGU</code>
+ <scientific_name>Taeniopygia guttata</scientific_name>
+ <common_name>Zebra finch</common_name>
+ <synonym>Poephila guttata</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/84/Taeniopygia_guttata_-_front_view_-_dundee_wildlife_park.jpg/355px-Taeniopygia_guttata_-_front_view_-_dundee_wildlife_park.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>ANOCA</name>
+ <taxonomy>
+ <id provider="eol">795869</id>
+ <code>ANOCA</code>
+ <scientific_name>Anolis carolinensis</scientific_name>
+ <authority>Voigt, 1832</authority>
+ <common_name>Green anole</common_name>
+ <synonym>American chameleon</synonym>
+ <rank>species</rank>
+ <uri>http://content61.eol.org/content/2009/09/20/01/05528_580_360.jpg</uri>
+ <uri>http://content61.eol.org/content/2008/10/08/13/66818_580_360.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>XENTR</name>
+ <taxonomy>
+ <id provider="uniprot">8364</id>
+ <code>XENTR</code>
+ <scientific_name>Xenopus tropicalis</scientific_name>
+ <common_name>Western clawed frog</common_name>
+ <synonym>Silurana tropicalis</synonym>
+ <rank>species</rank>
+ <uri>http://genoweb.univ-rennes1.fr/OGP/xenopus%20tropicalis.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Teleostei</name>
+ <taxonomy>
+ <id provider="uniprot">32443</id>
+ <scientific_name>Teleostei</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">123368</id>
+ <scientific_name>Acanthomorpha</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">32485</id>
+ <scientific_name>Percomorpha</scientific_name>
+ </taxonomy>
+ <clade>
+ <name>Smegmamorpha</name>
+ <clade>
+ <name>GASAC</name>
+ <taxonomy>
+ <id provider="uniprot">69293</id>
+ <code>GASAC</code>
+ <scientific_name>Gasterosteus aculeatus</scientific_name>
+ <common_name>Three-spined stickleback</common_name>
+ <rank>species</rank>
+ <uri>http://www.fiskbasen.se/images/gasterosteus_aculeatus.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>ORYLA</name>
+ <taxonomy>
+ <id provider="uniprot">8090</id>
+ <code>ORYLA</code>
+ <scientific_name>Oryzias latipes</scientific_name>
+ <common_name>Medaka fish</common_name>
+ <synonym>Japanese ricefish</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/4/49/Nihonmedaka.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">31031</id>
+ <scientific_name>Tetraodontidae</scientific_name>
+ <common_name>puffers</common_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>FUGRU</name>
+ <taxonomy>
+ <id provider="uniprot">31033</id>
+ <code>FUGRU</code>
+ <scientific_name>Takifugu rubripes</scientific_name>
+ <common_name>Japanese pufferfish</common_name>
+ <synonym>Fugu rubripes</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/2/25/Fugu_in_Tank.jpg/800px-Fugu_in_Tank.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>TETNG</name>
+ <taxonomy>
+ <id provider="uniprot">99883</id>
+ <code>TETNG</code>
+ <scientific_name>Tetraodon nigroviridis</scientific_name>
+ <common_name>Green puffer</common_name>
+ <synonym>Chelonodon nigroviridis</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/b/b6/Tetraodon_nigroviridis_1.jpg/800px-Tetraodon_nigroviridis_1.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">8049</id>
+ <code>GADMO</code>
+ <scientific_name>Gadus morhua</scientific_name>
+ <common_name>Atlantic cod</common_name>
+ <rank>species</rank>
+ <uri>http://www.marinbi.com/g-morhua.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>DANRE</name>
+ <taxonomy>
+ <id provider="uniprot">7955</id>
+ <code>DANRE</code>
+ <scientific_name>Danio rerio</scientific_name>
+ <common_name>Zebrafish</common_name>
+ <synonym>Brachydanio rerio</synonym>
+ <rank>species</rank>
+ <uri>http://fishbase.org.cn/images/species/Darer_m0.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">7868</id>
+ <code>CALMI</code>
+ <scientific_name>Callorhynchus milii</scientific_name>
+ <common_name>Australian ghost shark</common_name>
+ <synonym>Australian ghost shark</synonym>
+ <rank>species</rank>
+ <uri>http://www.tudiscovery.com/tiburones/que_es/popup_que/asset/07914907646434433_elephant_shark_380x290.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">7757</id>
+ <code>PETMA</code>
+ <scientific_name>Petromyzon marinus</scientific_name>
+ <common_name>Sea lamprey</common_name>
+ <rank>species</rank>
+ <uri>http://www.uk-fish.info/pics/sealampray01.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Urochordata</name>
+ <taxonomy>
+ <id provider="uniprot">7712</id>
+ <scientific_name>Urochordata</scientific_name>
+ <rank>subphylum</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">7718</id>
+ <scientific_name>Ciona</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>CIOIN</name>
+ <taxonomy>
+ <id provider="uniprot">7719</id>
+ <code>CIOIN</code>
+ <scientific_name>Ciona intestinalis</scientific_name>
+ <common_name>Transparent sea squirt</common_name>
+ <synonym>Ascidia intestinalis</synonym>
+ <rank>species</rank>
+ <uri>http://adl.brs.gov.au/marinepests/images/Ciona_intestinalis2.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CIOSA</name>
+ <taxonomy>
+ <id provider="uniprot">51511</id>
+ <code>CIOSA</code>
+ <scientific_name>Ciona savignyi</scientific_name>
+ <common_name>Pacific transparent sea squirt</common_name>
+ <rank>species</rank>
+ <uri>http://www.pnwscuba.com/invasives/photos/ciona4.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>OIKDI</name>
+ <taxonomy>
+ <id provider="ncbi">34765</id>
+ <code>OIKDI</code>
+ <scientific_name>Oikopleura dioica</scientific_name>
+ <common_name>Tunicate</common_name>
+ <rank>species</rank>
+ <uri>http://jellieszone.com/images/oikopleura.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>BRAFL</name>
+ <taxonomy>
+ <id provider="uniprot">7739</id>
+ <code>BRAFL</code>
+ <scientific_name>Branchiostoma floridae</scientific_name>
+ <common_name>Florida lancelet</common_name>
+ <synonym>Amphioxus</synonym>
+ <rank>species</rank>
+ <uri>http://genome.jgi-psf.org/Brafl1/Amphioxus-1.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Hemichordata & Echinodermata</name>
+ <clade>
+ <name>STRPU</name>
+ <taxonomy>
+ <id provider="uniprot">7668</id>
+ <code>STRPU</code>
+ <scientific_name>Strongylocentrotus purpuratus</scientific_name>
+ <common_name>Purple sea urchin</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/f/f4/Strongylocentrotus_purpuratus_1.jpg/724px-Strongylocentrotus_purpuratus_1.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>SACKO</name>
+ <taxonomy>
+ <id provider="uniprot">10224</id>
+ <code>SACKO</code>
+ <scientific_name>Saccoglossus kowalevskii</scientific_name>
+ <authority>Agassiz, 1873</authority>
+ <common_name>Acorn worm</common_name>
+ <rank>species</rank>
+ <uri>http://www.amnh.org/exhibitions/hall_tour/spectrum/specimens/a158.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Protostomia</name>
+ <clade>
+ <name>Ecdysozoa</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">6656</id>
+ <scientific_name>Arthropoda</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">197563</id>
+ <scientific_name>Mandibulata</scientific_name>
+ </taxonomy>
+ <clade>
+ <name>Pancrustacea</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">33340</id>
+ <scientific_name>Neoptera</scientific_name>
+ <rank>subclass</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">33392</id>
+ <scientific_name>Endopterygota</scientific_name>
+ <rank>infraclass</rank>
+ </taxonomy>
+ <clade>
+ <name>Hymenoptera & Lepidoptera & Diptera</name>
+ <clade>
+ <name>Lepidoptera & Diptera</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">7147</id>
+ <scientific_name>Diptera</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">7157</id>
+ <scientific_name>Culicidae</scientific_name>
+ <common_name>mosquitos</common_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>AEDAE</name>
+ <taxonomy>
+ <id provider="uniprot">7159</id>
+ <code>AEDAE</code>
+ <scientific_name>Aedes aegypti</scientific_name>
+ <common_name>Yellowfever mosquito</common_name>
+ <synonym>Culex aegypti</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/4/48/Aedes_aegypti_biting_human.jpg/757px-Aedes_aegypti_biting_human.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>ANOGA</name>
+ <taxonomy>
+ <id provider="uniprot">7165</id>
+ <code>ANOGA</code>
+ <scientific_name>Anopheles gambiae</scientific_name>
+ <common_name>African malaria mosquito</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/e/e9/Anopheles_gambiae_Mosquito.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CULPI</name>
+ <taxonomy>
+ <id provider="uniprot">7175</id>
+ <code>CULPI</code>
+ <scientific_name>Culex pipiens</scientific_name>
+ <common_name>House mosquito</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/3/35/Culex_pipiens_2007-1.jpg/628px-Culex_pipiens_2007-1.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">32341</id>
+ <scientific_name>Sophophora</scientific_name>
+ <rank>subgenus</rank>
+ </taxonomy>
+ <clade>
+ <name>DROME</name>
+ <taxonomy>
+ <id provider="uniprot">7227</id>
+ <code>DROME</code>
+ <scientific_name>Drosophila melanogaster</scientific_name>
+ <common_name>Fruit fly</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>DROPS</name>
+ <taxonomy>
+ <id provider="uniprot">46245</id>
+ <code>DROPS</code>
+ <scientific_name>Drosophila pseudoobscura pseudoobscura</scientific_name>
+ <common_name>Fruit fly</common_name>
+ <rank>subspecies</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>BOMMO</name>
+ <taxonomy>
+ <id provider="uniprot">7091</id>
+ <code>BOMMO</code>
+ <scientific_name>Bombyx mori</scientific_name>
+ <common_name>Silk moth</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">7400</id>
+ <scientific_name>Apocrita</scientific_name>
+ <common_name>wasps, ants and bees</common_name>
+ </taxonomy>
+ <clade>
+ <name>APIME</name>
+ <taxonomy>
+ <id provider="uniprot">7460</id>
+ <code>APIME</code>
+ <scientific_name>Apis mellifera</scientific_name>
+ <common_name>Honeybee</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>NASVI</name>
+ <taxonomy>
+ <id provider="uniprot">7425</id>
+ <code>NASVI</code>
+ <scientific_name>Nasonia vitripennis</scientific_name>
+ <common_name>Parasitic wasp</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>TRICA</name>
+ <taxonomy>
+ <id provider="uniprot">7070</id>
+ <code>TRICA</code>
+ <scientific_name>Tribolium castaneum</scientific_name>
+ <common_name>Red flour beetle</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">7524</id>
+ <scientific_name>Hemiptera</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>ACYPI</name>
+ <taxonomy>
+ <id provider="uniprot">7029</id>
+ <code>ACYPI</code>
+ <scientific_name>Acyrthosiphon pisum</scientific_name>
+ <common_name>Pea aphid</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>RHOPR</name>
+ <taxonomy>
+ <id provider="uniprot">13249</id>
+ <code>RHOPR</code>
+ <scientific_name>Rhodnius prolixus</scientific_name>
+ <common_name>Triatomid bug</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/b/b9/Rhodnius_prolixus.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">6658</id>
+ <scientific_name>Branchiopoda</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <name>DAPPU</name>
+ <taxonomy>
+ <id provider="uniprot">6669</id>
+ <code>DAPPU</code>
+ <scientific_name>Daphnia pulex</scientific_name>
+ <common_name>Water flea</common_name>
+ <rank>species</rank>
+ <uri>http://www.microscopy-uk.org.uk/mag/imgjun99/daphni.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">6661</id>
+ <code>ARTSF</code>
+ <scientific_name>Artemia franciscana</scientific_name>
+ <common_name>Brine shrimp</common_name>
+ <synonym>Artemia sanfranciscana</synonym>
+ <rank>species</rank>
+ <uri>http://www.alireza-asem.ir/images/Artemia.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">61985</id>
+ <scientific_name>Myriapoda</scientific_name>
+ <rank>subphylum</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">7540</id>
+ <scientific_name>Chilopoda</scientific_name>
+ <common_name>centipedes</common_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">126957</id>
+ <scientific_name>Strigamia maritima</scientific_name>
+ <rank>species</rank>
+ <uri>http://images.marinespecies.org/resized/22703_strigamia-maritima-male-loch-linnhe-scotland.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">29022</id>
+ <code>SCUCO</code>
+ <scientific_name>Scutigera coleoptrata</scientific_name>
+ <common_name>House centipede</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/1/14/Scutigera_coleoptrata.JPG</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">7553</id>
+ <scientific_name>Diplopoda</scientific_name>
+ <common_name>millipedes</common_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">118561</id>
+ <scientific_name>Helminthomorpha</scientific_name>
+ <rank>subclass</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">174156</id>
+ <code>NARAN</code>
+ <scientific_name>Narceus annularis</scientific_name>
+ <common_name>Millipede</common_name>
+ <rank>species</rank>
+ <uri>http://i.pbase.com/g4/59/68959/2/59864073.narceus0705062large.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">364406</id>
+ <scientific_name>Antrokoreana gracilipes</scientific_name>
+ <rank>species</rank>
+ <uri>http://www.gwbaekdu.com/data/2d/%EA%B3%A1%EC%84%9D%EA%B5%B4_4(%EB%93%B1%EC%A4%84%EA%B5%B4%EB%85%B8%EB%9E%98%EA%B8%B0).jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">52428</id>
+ <scientific_name>Polyxenus lagurus</scientific_name>
+ <common_name>bristly millipede</common_name>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/5/54/Polyxenus.lagurus.1.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>IXOSC</name>
+ <taxonomy>
+ <id provider="uniprot">6945</id>
+ <code>IXOSC</code>
+ <scientific_name>Ixodes scapularis</scientific_name>
+ <common_name>Black-legged tick</common_name>
+ <synonym>Deer tick</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/8/8c/Deertick.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">119089</id>
+ <scientific_name>Chromadorea</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <reference doi="10.1038/32160">
+ </reference>
+ <clade>
+ <name>nematode Clade V</name>
+ <clade>
+ <name>Caenorhabditis</name>
+ <taxonomy>
+ <id provider="uniprot">6237</id>
+ <scientific_name>Caenorhabditis</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>CAEEL</name>
+ <taxonomy>
+ <id provider="uniprot">6239</id>
+ <code>CAEEL</code>
+ <scientific_name>Caenorhabditis elegans</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CAEBR</name>
+ <taxonomy>
+ <id provider="uniprot">6238</id>
+ <code>CAEBR</code>
+ <scientific_name>Caenorhabditis briggsae</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>PRIPA</name>
+ <taxonomy>
+ <id provider="uniprot">54126</id>
+ <code>PRIPA</code>
+ <scientific_name>Pristionchus pacificus</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>BRUMA</name>
+ <taxonomy>
+ <id provider="uniprot">6279</id>
+ <code>BRUMA</code>
+ <scientific_name>Brugia malayi</scientific_name>
+ <common_name>Filarial nematode worm</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Lophotrochozoa</name>
+ <clade>
+ <name>Annelida & Mollusca</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">6340</id>
+ <scientific_name>Annelida</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <name>CAP</name>
+ <taxonomy>
+ <id provider="uniprot">283909</id>
+ <scientific_name>Capitella teleta</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>HELRO</name>
+ <taxonomy>
+ <id provider="uniprot">6412</id>
+ <code>HELRO</code>
+ <scientific_name>Helobdella robusta</scientific_name>
+ <common_name>Californian leech</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>LOTGI</name>
+ <taxonomy>
+ <id provider="uniprot">225164</id>
+ <code>LOTGI</code>
+ <scientific_name>Lottia gigantea</scientific_name>
+ <common_name>Owl limpet</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">6157</id>
+ <scientific_name>Platyhelminthes</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <name>SCHMA</name>
+ <taxonomy>
+ <id provider="uniprot">6183</id>
+ <code>SCHMA</code>
+ <scientific_name>Schistosoma mansoni</scientific_name>
+ <common_name>Blood fluke</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>SCHMD</name>
+ <taxonomy>
+ <id provider="uniprot">79327</id>
+ <code>SCHMD</code>
+ <scientific_name>Schmidtea mediterranea</scientific_name>
+ <common_name>Freshwater planarian flatworm</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Cnidaria</name>
+ <taxonomy>
+ <id provider="uniprot">6073</id>
+ <scientific_name>Cnidaria</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <name>NEMVE</name>
+ <taxonomy>
+ <id provider="uniprot">45351</id>
+ <code>NEMVE</code>
+ <scientific_name>Nematostella vectensis</scientific_name>
+ <common_name>Starlet sea anemone</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>HYDMA</name>
+ <taxonomy>
+ <id provider="eol">9119928</id>
+ <code>HYDMA</code>
+ <scientific_name>Hydra magnipapillata</scientific_name>
+ <authority>Ito, 1947</authority>
+ <rank>species</rank>
+ <uri>http://www.nig.ac.jp/labs/OntoGen/magni.html</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>TRIAD</name>
+ <taxonomy>
+ <id provider="uniprot">10228</id>
+ <code>TRIAD</code>
+ <scientific_name>Trichoplax adhaerens</scientific_name>
+ <synonym>Trichoplax reptans</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ <reference doi="10.1073/pnas.0602076103">
+ </reference>
+ </clade>
+ </clade>
+ <clade>
+ <name>AMPQU</name>
+ <taxonomy>
+ <id provider="uniprot">400682</id>
+ <code>AMPQU</code>
+ <scientific_name>Amphimedon queenslandica</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">81524</id>
+ <scientific_name>Codonosigidae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>MONBE</name>
+ <taxonomy>
+ <id provider="uniprot">81824</id>
+ <code>MONBE</code>
+ <scientific_name>Monosiga brevicollis</scientific_name>
+ <common_name>Choanoflagellate</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">946362</id>
+ <code>SALS5</code>
+ <scientific_name>Salpingoeca rosetta</scientific_name>
+ <synonym>Proterospongia sp. ATCC 50818</synonym>
+ <synonym>Salpingoeca sp. ATCC 50818</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Ichthyophonida & Filasterea</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">198625</id>
+ <scientific_name>Ichthyophonida</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4881</id>
+ <code>AMOPA</code>
+ <scientific_name>Amoebidium parasiticum</scientific_name>
+ <rank>species</rank>
+ <uri>http://www.diark.org/img/species_pict/Amoebidium_parasiticum</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>SPHARC</name>
+ <taxonomy>
+ <id provider="uniprot">72019</id>
+ <scientific_name>Sphaeroforma arctica</scientific_name>
+ <rank>species</rank>
+ <uri>http://www.sciencedirect.com/cache/MiamiImageURL/1-s2.0-S0168952507000236-gr2.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <scientific_name>Filasterea</scientific_name>
+ </taxonomy>
+ <reference doi="10.1371/journal.pone.0002098">
+ </reference>
+ <reference>
+ </reference>
+ <clade>
+ <name>MINVIB</name>
+ <taxonomy>
+ <id provider="uniprot">134558</id>
+ <scientific_name>Ministeria vibrans</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CAPOWC</name>
+ <taxonomy>
+ <id provider="uniprot">192875</id>
+ <scientific_name>Capsaspora owczarzaki</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <scientific_name>Holomycota</scientific_name>
+ <synonym>Nucletmycea</synonym>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4751</id>
+ <scientific_name>Fungi</scientific_name>
+ <rank>kingdom</rank>
+ </taxonomy>
+ <clade>
+ <name>Dikarya & Mucoromycotina & Kickxellomycotina & Blastocladiomycota & Chytridiomycota</name>
+ <clade>
+ <name>Dikarya & Mucoromycotina & Kickxellomycotina & Blastocladiomycota</name>
+ <clade>
+ <name>Dikarya & Mucoromycotina & Kickxellomycotina</name>
+ <clade>
+ <name>Dikarya & Mucoromycotina</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">451864</id>
+ <scientific_name>Dikarya</scientific_name>
+ <rank>subkingdom</rank>
+ </taxonomy>
+ <reference doi="10.1038/nature05110">
+ </reference>
+ <reference>
+ </reference>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4890</id>
+ <scientific_name>Ascomycota</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <name>Pezizomycotina_Saccharomycetales</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">147538</id>
+ <scientific_name>Pezizomycotina</scientific_name>
+ <rank>subphylum</rank>
+ </taxonomy>
+ <clade>
+ <name>Sordariomycetes & Leotiomycetes & Dothideomycetes & Eurotiales</name>
+ <clade>
+ <name>Sordariomycetes & Leotiomycetes & Dothideomycetes</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">147541</id>
+ <scientific_name>Dothideomycetes</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <reference doi="10.3114/sim.2009.64.01">
+ <desc>A class-wide phylogenetic assessment of Dothideomycetes</desc>
+ </reference>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">134362</id>
+ <scientific_name>Capnodiales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">41254</id>
+ <scientific_name>Mycosphaerella</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>MYCFI</name>
+ <taxonomy>
+ <id provider="uniprot">83344</id>
+ <scientific_name>Mycosphaerella fijiensis</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MYCGR</name>
+ <taxonomy>
+ <id provider="uniprot">54734</id>
+ <code>MYCGR</code>
+ <scientific_name>Mycosphaerella graminicola</scientific_name>
+ <common_name>Speckled leaf blotch fungus</common_name>
+ <synonym>Septoria tritici</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MYCPOP</name>
+ <taxonomy>
+ <id provider="uniprot">85929</id>
+ <scientific_name>Mycosphaerella populorum</scientific_name>
+ <synonym>Septoria musiva</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MYCPJ</name>
+ <taxonomy>
+ <id provider="uniprot">64363</id>
+ <code>MYCPJ</code>
+ <scientific_name>Mycosphaerella pini</scientific_name>
+ <common_name>Red band needle blight disease fungus</common_name>
+ <synonym>Dothistroma septosporum</synonym>
+ <synonym>Dothistroma pini</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">430998</id>
+ <code>BAUCOM</code>
+ <scientific_name>Baudoinia compniacensis</scientific_name>
+ <rank>species</rank>
+ <uri>http://www.diark.org/img/species_pict/Baudoinia_compniacensis</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">715340</id>
+ <scientific_name>Pleosporineae</scientific_name>
+ <rank>suborder</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">28556</id>
+ <scientific_name>Pleosporaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>Cochliobolus & Setosphaeria</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5015</id>
+ <scientific_name>Cochliobolus</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>COCHE</name>
+ <taxonomy>
+ <id provider="uniprot">5016</id>
+ <code>COCHE</code>
+ <scientific_name>Cochliobolus heterostrophus</scientific_name>
+ <synonym>Drechslera maydis</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">45130</id>
+ <code>COCSA</code>
+ <scientific_name>Cochliobolus sativus</scientific_name>
+ <synonym>Bipolaris sorokiniana</synonym>
+ <rank>species</rank>
+ <uri>http://www.plantmanagementnetwork.org/pub/php/diagnosticguide/2003/rootrot/image/mathre6sm.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">93612</id>
+ <code>SETTU</code>
+ <scientific_name>Setosphaeria turcica</scientific_name>
+ <authority>(Luttr.) K.J. Leonard & Suggs, (1974)</authority>
+ <common_name>Northern corn leaf blight disease fungus</common_name>
+ <synonym>Exserohilum turcicum</synonym>
+ <synonym>Helminthosporium turcicum</synonym>
+ <rank>species</rank>
+ <uri>http://www.pflanzenkrankheiten.ch/diseases/STU/figures_STU/HTU_Mais_Mik_7_k.jpg</uri>
+ <uri>http://www.pflanzenkrankheiten.ch/diseases/STU/figures_STU/Exserohilum_turcicum_001_k.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>PYRTR</name>
+ <taxonomy>
+ <id provider="uniprot">426418</id>
+ <code>PYRTR</code>
+ <scientific_name>Pyrenophora tritici-repentis (strain Pt-1C-BFP)</scientific_name>
+ <common_name>Wheat tan spot fungus</common_name>
+ <synonym>Drechslera tritici-repentis</synonym>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>PHANO</name>
+ <taxonomy>
+ <id provider="uniprot">13684</id>
+ <code>PHANO</code>
+ <scientific_name>Phaeosphaeria nodorum</scientific_name>
+ <common_name>Glume blotch fungus</common_name>
+ <synonym>Septoria nodorum</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Sordariomycetes & Leotiomycetes</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">147550</id>
+ <scientific_name>Sordariomycetes</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <name>Magnaporthales & Hypocreales</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5125</id>
+ <scientific_name>Hypocreales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>TRIVE</name>
+ <taxonomy>
+ <id provider="uniprot">29875</id>
+ <code>TRIVE</code>
+ <scientific_name>Trichoderma virens</scientific_name>
+ <common_name>Gliocladium virens</common_name>
+ <synonym>Trichoderma virens</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>GIBZE</name>
+ <taxonomy>
+ <id provider="uniprot">5518</id>
+ <code>GIBZE</code>
+ <scientific_name>Gibberella zeae</scientific_name>
+ <common_name>Wheat head blight fungus</common_name>
+ <synonym>Fusarium graminearum</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>ACRALC</name>
+ <taxonomy>
+ <id provider="uniprot">398408</id>
+ <scientific_name>Acremonium alcalophilum</scientific_name>
+ <rank>species</rank>
+ <uri>http://genome.jgi-psf.org/public/Acral1_c3a/Acral1.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>MAGGR</name>
+ <taxonomy>
+ <id provider="uniprot">148305</id>
+ <code>MAGGR</code>
+ <scientific_name>Magnaporthe grisea</scientific_name>
+ <common_name>Rice blast fungus</common_name>
+ <synonym>Pyricularia grisea</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5139</id>
+ <scientific_name>Sordariales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">35718</id>
+ <scientific_name>Chaetomiaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">35719</id>
+ <scientific_name>Thielavia</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>THITER</name>
+ <taxonomy>
+ <id provider="eol">193532</id>
+ <scientific_name>Thielavia terrestris</scientific_name>
+ <authority>Malloch & Cain 1972</authority>
+ <synonym>Acremonium alabamense</synonym>
+ <rank>species</rank>
+ <uri>http://genome.jgi-psf.org/public/Thite2/Thite1.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MYCTHE</name>
+ <taxonomy>
+ <id provider="uniprot">573728</id>
+ <scientific_name>Myceliophthora thermophila</scientific_name>
+ <authority>(Apinis) Oorschot 1977</authority>
+ <synonym>Sporotrichum thermophilum</synonym>
+ <synonym>anamorph of Thielavia heterothallica</synonym>
+ <rank>species</rank>
+ <uri>http://genome.jgi-psf.org/public/Spoth2/Spoth0.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>CHAGB</name>
+ <taxonomy>
+ <id provider="eol">1029505</id>
+ <code>CHAGB</code>
+ <scientific_name>Chaetomium globosum</scientific_name>
+ <authority>Kunze 1817</authority>
+ <common_name>Soil fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>NEUCR</name>
+ <taxonomy>
+ <id provider="uniprot">5141</id>
+ <code>NEUCR</code>
+ <scientific_name>Neurospora crassa</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">147548</id>
+ <scientific_name>Leotiomycetes</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">28983</id>
+ <scientific_name>Sclerotiniaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">40559</id>
+ <code>BOTFU</code>
+ <scientific_name>Botryotinia fuckeliana</scientific_name>
+ <common_name>Noble rot fungus</common_name>
+ <synonym>Botrytis cinerea</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5180</id>
+ <code>SCLSC</code>
+ <scientific_name>Sclerotinia sclerotiorum</scientific_name>
+ <common_name>White mold</common_name>
+ <synonym>Whetzelinia sclerotiorum</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>OIDMAI</name>
+ <taxonomy>
+ <id provider="uniprot">78148</id>
+ <scientific_name>Oidiodendron maius</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">28568</id>
+ <scientific_name>Trichocomaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>Neosartorya_Emericella</name>
+ <clade>
+ <name>NEOFI</name>
+ <taxonomy>
+ <id provider="uniprot">331117</id>
+ <code>NEOFI</code>
+ <scientific_name>Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)</scientific_name>
+ <synonym>Aspergillus fischerianus</synonym>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>EMENI</name>
+ <taxonomy>
+ <id provider="eol">195546</id>
+ <code>EMENI</code>
+ <scientific_name>Emericella nidulans</scientific_name>
+ <authority>Vuill. 1927</authority>
+ <synonym>Aspergillus nidulans</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5052</id>
+ <scientific_name>Aspergillus</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>ASPFL</name>
+ <taxonomy>
+ <id provider="uniprot">5059</id>
+ <code>ASPFL</code>
+ <scientific_name>Aspergillus flavus</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>ASPNG</name>
+ <taxonomy>
+ <id provider="uniprot">5061</id>
+ <code>ASPNG</code>
+ <scientific_name>Aspergillus niger</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">33183</id>
+ <scientific_name>Onygenales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>COCIM</name>
+ <taxonomy>
+ <id provider="uniprot">5501</id>
+ <code>COCIM</code>
+ <scientific_name>Coccidioides immitis</scientific_name>
+ <common_name>Valley fever fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>UNCRE</name>
+ <taxonomy>
+ <id provider="uniprot">336963</id>
+ <code>UNCRE</code>
+ <scientific_name>Uncinocarpus reesii (strain UAMH 1704)</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4892</id>
+ <scientific_name>Saccharomycetales</scientific_name>
+ <common_name>budding yeasts</common_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>Candida & Debaryomyces & Saccharomycetacea</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4893</id>
+ <scientific_name>Saccharomycetaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>Saccharomyces_Pichia</name>
+ <clade>
+ <name>Saccharomyces</name>
+ <clade>
+ <name>YEAST</name>
+ <taxonomy>
+ <id provider="uniprot">4932</id>
+ <code>YEAST</code>
+ <scientific_name>Saccharomyces cerevisiae</scientific_name>
+ <common_name>Baker's yeast</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>SACCA</name>
+ <taxonomy>
+ <id provider="uniprot">27288</id>
+ <code>SACCA</code>
+ <scientific_name>Saccharomyces castellii</scientific_name>
+ <common_name>Yeast</common_name>
+ <synonym>Saccharomyces castellii</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>PICAN</name>
+ <taxonomy>
+ <id provider="uniprot">4905</id>
+ <code>PICAN</code>
+ <scientific_name>Pichia angusta</scientific_name>
+ <common_name>Yeast</common_name>
+ <synonym>Hansenula polymorpha</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Kluyveromyces & Ashbya</name>
+ <clade>
+ <name>ASHGO</name>
+ <taxonomy>
+ <id provider="uniprot">33169</id>
+ <code>ASHGO</code>
+ <scientific_name>Ashbya gossypii</scientific_name>
+ <common_name>Yeast</common_name>
+ <synonym>Eremothecium gossypii</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>Kluyveromyces</name>
+ <clade>
+ <name>KLULA</name>
+ <taxonomy>
+ <id provider="uniprot">28985</id>
+ <code>KLULA</code>
+ <scientific_name>Kluyveromyces lactis</scientific_name>
+ <common_name>Yeast</common_name>
+ <synonym>Candida sphaerica</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>KLUWA</name>
+ <taxonomy>
+ <id provider="uniprot">4914</id>
+ <code>KLUWA</code>
+ <scientific_name>Kluyveromyces waltii</scientific_name>
+ <common_name>Yeast</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Candida & Debaryomyces</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5475</id>
+ <scientific_name>Candida</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>CANAL</name>
+ <taxonomy>
+ <id provider="uniprot">5476</id>
+ <code>CANAL</code>
+ <scientific_name>Candida albicans</scientific_name>
+ <common_name>Yeast</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CANTR</name>
+ <taxonomy>
+ <id provider="uniprot">5482</id>
+ <code>CANTR</code>
+ <scientific_name>Candida tropicalis</scientific_name>
+ <common_name>Yeast</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>DEBHA</name>
+ <taxonomy>
+ <id provider="uniprot">4959</id>
+ <code>DEBHA</code>
+ <scientific_name>Debaryomyces hansenii</scientific_name>
+ <common_name>Yeast</common_name>
+ <synonym>Torulaspora hansenii</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>YARLI</name>
+ <taxonomy>
+ <id provider="uniprot">4952</id>
+ <code>YARLI</code>
+ <scientific_name>Yarrowia lipolytica</scientific_name>
+ <synonym>Candida lipolytica</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">451866</id>
+ <scientific_name>Taphrinomycotina</scientific_name>
+ <rank>subphylum</rank>
+ </taxonomy>
+ <clade>
+ <name>Pneumocystidomycetes & Schizosaccharomycetes</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4895</id>
+ <scientific_name>Schizosaccharomyces</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>SCHPO</name>
+ <taxonomy>
+ <id provider="uniprot">4896</id>
+ <code>SCHPO</code>
+ <scientific_name>Schizosaccharomyces pombe</scientific_name>
+ <common_name>Fission yeast</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>SCHJP</name>
+ <taxonomy>
+ <id provider="uniprot">4897</id>
+ <code>SCHJP</code>
+ <scientific_name>Schizosaccharomyces japonicus</scientific_name>
+ <common_name>Fission yeast</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4899</id>
+ <code>SCHOT</code>
+ <scientific_name>Schizosaccharomyces octosporus</scientific_name>
+ <common_name>Fission yeast</common_name>
+ <rank>species</rank>
+ <uri>http://www.dipbot.unict.it/sistematica/Immagini/12002.JPG</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>PNECA</name>
+ <taxonomy>
+ <id provider="uniprot">4754</id>
+ <code>PNECA</code>
+ <scientific_name>Pneumocystis carinii</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>SAICOM</name>
+ <taxonomy>
+ <id provider="uniprot">5606</id>
+ <scientific_name>Saitoella complicata</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5204</id>
+ <scientific_name>Basidiomycota</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <name>Agaricomycotina & Ustilaginomycotina & Pucciniomycotina</name>
+ <clade>
+ <name>Agaricomycotina & Ustilaginomycotina</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5302</id>
+ <scientific_name>Agaricomycotina</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">155619</id>
+ <scientific_name>Homobasidiomycetes</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <reference doi="10.1098/rspb.2002.2123">
+ <desc>Evolution of complex fruiting–body morphologies in homobasidiomycetes</desc>
+ </reference>
+ <clade>
+ <name>Agaricomycetidae & Gloeophyllum & Aphyllophorales</name>
+ <clade>
+ <name>Agaricomycetidae & Gloeophyllum</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">452333</id>
+ <scientific_name>Agaricomycetidae</scientific_name>
+ <rank>subclass</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5338</id>
+ <scientific_name>Agaricales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>Agaricus & Coprinopsis & Laccaria</name>
+ <clade>
+ <name>Agaricus & Coprinopsis</name>
+ <clade>
+ <name>AGABB</name>
+ <taxonomy>
+ <id provider="uniprot">192524</id>
+ <scientific_name>Agaricus bisporus var. burnettii</scientific_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>COPCI</name>
+ <taxonomy>
+ <id provider="uniprot">5346</id>
+ <code>COPCI</code>
+ <scientific_name>Coprinopsis cinerea</scientific_name>
+ <common_name>Inky cap fungus</common_name>
+ <synonym>Hormographiella aspergillata</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>LACBI</name>
+ <taxonomy>
+ <id provider="uniprot">29883</id>
+ <code>LACBI</code>
+ <scientific_name>Laccaria bicolor</scientific_name>
+ <common_name>Bicoloured deceiver</common_name>
+ <synonym>Laccaria laccata var. bicolor</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>PLEOS</name>
+ <taxonomy>
+ <id provider="uniprot">5322</id>
+ <code>PLEOS</code>
+ <scientific_name>Pleurotus ostreatus</scientific_name>
+ <common_name>Oyster mushroom</common_name>
+ <synonym>White-rot fungus</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">227334</id>
+ <scientific_name>Coniophorineae</scientific_name>
+ <rank>suborder</rank>
+ </taxonomy>
+ <clade>
+ <name>SERLA</name>
+ <taxonomy>
+ <id provider="uniprot">85982</id>
+ <scientific_name>Serpula lacrymans</scientific_name>
+ <common_name>dry rot fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CONPUT</name>
+ <taxonomy>
+ <id provider="uniprot">80637</id>
+ <scientific_name>Coniophora puteana</scientific_name>
+ <authority>Schum. ex Fries</authority>
+ <common_name>cellar fungus</common_name>
+ <rank>species</rank>
+ <uri>http://genome.jgi-psf.org/public/Conpu1/P1240066_dp.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>GLOTR</name>
+ <taxonomy>
+ <id provider="uniprot">104355</id>
+ <code>GLOTR</code>
+ <scientific_name>Gloeophyllum trabeum</scientific_name>
+ <common_name>Brown rot fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5303</id>
+ <scientific_name>Aphyllophorales</scientific_name>
+ <authority>Gäum. (1926)</authority>
+ <common_name>Shelf Fungi</common_name>
+ <synonym>Polyporales</synonym>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">83233</id>
+ <scientific_name>Coriolaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <reference doi="10.1017/S1477200005001623">
+ <desc>The phylogenetic distribution of resupinate forms across the major clades of mushroom-forming fungi (Homobasidiomycetes)</desc>
+ </reference>
+ <reference>
+ </reference>
+ <reference>
+ </reference>
+ <clade>
+ <name>Postia & Fomitopsis & Wolfiporia & Trametes</name>
+ <clade>
+ <name>Antrodia clade</name>
+ <taxonomy>
+ <common_name>Antrodia clade</common_name>
+ </taxonomy>
+ <clade>
+ <name>POSPL</name>
+ <taxonomy>
+ <id provider="uniprot">104341</id>
+ <scientific_name>Postia placenta</scientific_name>
+ <rank>species</rank>
+ <uri>http://www.commanster.eu/commanster/Mushrooms/Polypore/SuPolypore/Postia.placenta.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>FOMPIN</name>
+ <taxonomy>
+ <id provider="uniprot">40483</id>
+ <scientific_name>Fomitopsis pinicola</scientific_name>
+ <authority>P. Karst. 1881</authority>
+ <common_name>Red banded polypore</common_name>
+ <synonym>Fomes pinicola</synonym>
+ <rank>species</rank>
+ <uri>http://content6.eol.org/content/2009/06/07/01/48471_large.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>core polyporoid clade</name>
+ <taxonomy>
+ <common_name>core polyporoid clade</common_name>
+ </taxonomy>
+ <clade>
+ <name>WOLCOC</name>
+ <taxonomy>
+ <id provider="uniprot">81056</id>
+ <scientific_name>Wolfiporia cocos</scientific_name>
+ <rank>species</rank>
+ <uri>http://toolate.s7.coreserver.jp/kinoko/fungi/wolfiporia_cocos/w_cocos_002.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>TRAVE</name>
+ <taxonomy>
+ <id provider="uniprot">5325</id>
+ <code>TRAVE</code>
+ <scientific_name>Trametes versicolor</scientific_name>
+ <authority>(L.) Lloyd 1921</authority>
+ <common_name>White-rot fungus</common_name>
+ <synonym>Coriolus versicolor</synonym>
+ <synonym>Bjerkandera versicolor</synonym>
+ <rank>species</rank>
+ <uri>http://www.mykoweb.com/CAF/photos/Trametes_versicolor(bab-1).jpg</uri>
+ <uri>http://www.mykoweb.com/CAF/photos/Trametes_versicolor(bab-2).jpg</uri>
+ <uri>http://www.mykoweb.com/CAF/photos/Trametes_versicolor(mgw-01).jpg</uri>
+ <uri>http://genome.jgi-psf.org/public/Trave1/Trametes_versicolor.JPG</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>CERSU</name>
+ <taxonomy>
+ <id provider="uniprot">42742</id>
+ <code>CERSU</code>
+ <scientific_name>Ceriporiopsis subvermispora</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>DICSQU</name>
+ <taxonomy>
+ <id provider="uniprot">114155</id>
+ <scientific_name>Dichomitus squalens</scientific_name>
+ <authority>(P. Karst.) D. A. Reid 1965</authority>
+ <common_name>Red rot</common_name>
+ <synonym>Polyporus anceps</synonym>
+ <rank>species</rank>
+ <uri>http://www.fs.fed.us/r3/resources/health/field-guide/images/large/sds-f199-large.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>HETAN</name>
+ <taxonomy>
+ <id provider="uniprot">13563</id>
+ <code>HETAN</code>
+ <scientific_name>Heterobasidion annosum</scientific_name>
+ <common_name>Root rot fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5215</id>
+ <scientific_name>Tremellaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>CRYNE</name>
+ <taxonomy>
+ <id provider="uniprot">5207</id>
+ <code>CRYNE</code>
+ <scientific_name>Cryptococcus neoformans</scientific_name>
+ <synonym>Filobasidiella neoformans</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>TREME</name>
+ <taxonomy>
+ <id provider="eol">1029985</id>
+ <code>TREME</code>
+ <scientific_name>Tremella mesenterica</scientific_name>
+ <authority>Pers. 1800</authority>
+ <common_name>Jelly fungus</common_name>
+ <synonym>Yellow Brain</synonym>
+ <synonym>Tremella lutescens</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">452284</id>
+ <scientific_name>Ustilaginomycotina</scientific_name>
+ <rank>subphylum</rank>
+ </taxonomy>
+ <clade>
+ <name>USTMA</name>
+ <taxonomy>
+ <id provider="uniprot">5270</id>
+ <code>USTMA</code>
+ <scientific_name>Ustilago maydis</scientific_name>
+ <common_name>Smut fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">425265</id>
+ <code>MALGO</code>
+ <scientific_name>Malassezia globosa (strain ATCC MYA-4612 / CBS 7966)</scientific_name>
+ <common_name>Dandruff-associated fungus</common_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">29000</id>
+ <scientific_name>Pucciniomycotina</scientific_name>
+ <rank>subphylum</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5258</id>
+ <scientific_name>Pucciniales</scientific_name>
+ <common_name>rusts</common_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>PUCGR</name>
+ <taxonomy>
+ <id provider="eol">1029947</id>
+ <code>PUCGR</code>
+ <scientific_name>Puccinia graminis</scientific_name>
+ <authority>Pers. 1794</authority>
+ <common_name>Black stem rust fungus</common_name>
+ <synonym>Wheat rust</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MELLP</name>
+ <taxonomy>
+ <id provider="eol">156696</id>
+ <code>MELLP</code>
+ <scientific_name>Melampsora laricis-populina</scientific_name>
+ <authority>Kleb. 1902</authority>
+ <synonym>Melampsora larici-populina</synonym>
+ <synonym>Melampsora laricipopulina</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">89013</id>
+ <scientific_name>mitosporic Sporidiobolales</scientific_name>
+ </taxonomy>
+ <clade>
+ <name>SPORO</name>
+ <taxonomy>
+ <id provider="eol">1013696</id>
+ <scientific_name>Sporobolomyces roseus</scientific_name>
+ <authority>Kluyver & C. B. Niel 1924</authority>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>RHOGR</name>
+ <taxonomy>
+ <id provider="uniprot">29898</id>
+ <code>RHOGR</code>
+ <scientific_name>Rhodotorula graminis</scientific_name>
+ <common_name>Yeast</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>WALSE</name>
+ <taxonomy>
+ <id provider="uniprot">148960</id>
+ <code>WALSE</code>
+ <scientific_name>Wallemia sebi</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">451507</id>
+ <scientific_name>Mucoromycotina</scientific_name>
+ <rank>subphylum</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">34489</id>
+ <scientific_name>Mucoraceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>MUCCI</name>
+ <taxonomy>
+ <id provider="uniprot">36080</id>
+ <code>MUCCI</code>
+ <scientific_name>Mucor circinelloides</scientific_name>
+ <synonym>Mucor griseo-roseus</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>PHYBL</name>
+ <taxonomy>
+ <id provider="uniprot">4837</id>
+ <code>PHYBL</code>
+ <scientific_name>Phycomyces blakesleeanus</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>RHIOR</name>
+ <taxonomy>
+ <id provider="uniprot">64495</id>
+ <code>RHIOR</code>
+ <scientific_name>Rhizopus oryzae</scientific_name>
+ <synonym>Rhizopus delemar</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>MORVER</name>
+ <taxonomy>
+ <id provider="uniprot">78898</id>
+ <scientific_name>Mortierella verticillata</scientific_name>
+ <rank>species</rank>
+ <uri>http://www.diark.org/img/species_pict/Mortierella_verticillata</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>COEREV</name>
+ <taxonomy>
+ <id provider="uniprot">61392</id>
+ <scientific_name>Coemansia reversa</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">28583</id>
+ <code>ALLMA</code>
+ <scientific_name>Allomyces macrogynus</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">451435</id>
+ <scientific_name>Chytridiomycetes</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <name>BATDE</name>
+ <taxonomy>
+ <id provider="uniprot">109871</id>
+ <code>BATDE</code>
+ <scientific_name>Batrachochytrium dendrobatidis</scientific_name>
+ <common_name>Frog chytrid fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>SPIPN</name>
+ <taxonomy>
+ <id provider="uniprot">109760</id>
+ <code>SPIPN</code>
+ <scientific_name>Spizellomyces punctatus</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>ENCCU</name>
+ <taxonomy>
+ <id provider="uniprot">6035</id>
+ <code>ENCCU</code>
+ <scientific_name>Encephalitozoon cuniculi</scientific_name>
+ <common_name>Microsporidian parasite</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Fonticula & Nucleariidae</name>
+ <reference doi="10.1093/molbev/msp185">
+ </reference>
+ <clade>
+ <name>FONALB</name>
+ <taxonomy>
+ <id provider="uniprot">691883</id>
+ <scientific_name>Fonticula alba</scientific_name>
+ <synonym>Fonticula alba Worley, Raper & Hohl. 1979</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>NUCSIM</name>
+ <taxonomy>
+ <id provider="uniprot">154970</id>
+ <scientific_name>Nuclearia simplex</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>THETRA</name>
+ <taxonomy>
+ <id provider="uniprot">529818</id>
+ <scientific_name>Thecamonas trahens</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Amoebozoa</name>
+ <taxonomy>
+ <id provider="uniprot">554915</id>
+ <scientific_name>Amoebozoa</scientific_name>
+ </taxonomy>
+ <clade>
+ <name>Dictyostelium</name>
+ <taxonomy>
+ <id provider="uniprot">5782</id>
+ <scientific_name>Dictyostelium</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>DICDI</name>
+ <taxonomy>
+ <id provider="uniprot">44689</id>
+ <code>DICDI</code>
+ <scientific_name>Dictyostelium discoideum</scientific_name>
+ <common_name>Slime mold</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>DICPU</name>
+ <taxonomy>
+ <id provider="uniprot">5786</id>
+ <code>DICPU</code>
+ <scientific_name>Dictyostelium purpureum</scientific_name>
+ <common_name>Slime mold</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>ENTHI</name>
+ <taxonomy>
+ <id provider="uniprot">5759</id>
+ <code>ENTHI</code>
+ <scientific_name>Entamoeba histolytica</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Bikonta</name>
+ <reference doi="10.1099/ijs.0.63216-0">
+ </reference>
+ <clade>
+ <name>Corticata</name>
+ <clade>
+ <name>Archaeplastida</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">33090</id>
+ <scientific_name>Viridiplantae</scientific_name>
+ <common_name>green plants</common_name>
+ <rank>kingdom</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3193</id>
+ <scientific_name>Embryophyta</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">58023</id>
+ <scientific_name>Tracheophyta</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3398</id>
+ <scientific_name>Magnoliophyta</scientific_name>
+ <common_name>flowering plants</common_name>
+ <synonym>Angiospermae</synonym>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">71240</id>
+ <scientific_name>eudicotyledons</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">91827</id>
+ <scientific_name>core eudicotyledons</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">71275</id>
+ <scientific_name>rosids</scientific_name>
+ <synonym>Rosidae</synonym>
+ <rank>subclass</rank>
+ </taxonomy>
+ <clade>
+ <name>fabids & malvids</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">91835</id>
+ <scientific_name>fabids</scientific_name>
+ <synonym>eurosids I</synonym>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3646</id>
+ <scientific_name>Malpighiales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3977</id>
+ <scientific_name>Euphorbiaceae</scientific_name>
+ <common_name>spurge family</common_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>MANES</name>
+ <taxonomy>
+ <id provider="uniprot">3983</id>
+ <code>MANES</code>
+ <scientific_name>Manihot esculenta</scientific_name>
+ <common_name>Tapioca</common_name>
+ <synonym>Jatropha manihot</synonym>
+ <rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/9/99/Iwata_kenichi_cassava.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>RICCO</name>
+ <taxonomy>
+ <id provider="uniprot">3988</id>
+ <code>RICCO</code>
+ <scientific_name>Ricinus communis</scientific_name>
+ <common_name>Castor bean</common_name>
+ <synonym>Ricinus sanguineus</synonym>
+ <rank>species</rank>
+ <uri>http://nmorganics.net/wp-content/uploads/2011/09/castor.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>POPTR</name>
+ <taxonomy>
+ <id provider="uniprot">3694</id>
+ <code>POPTR</code>
+ <scientific_name>Populus trichocarpa</scientific_name>
+ <common_name>Western balsam poplar</common_name>
+ <synonym>Populus balsamifera subsp. trichocarpa</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Rosales & Cucurbitales & Fabales</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3814</id>
+ <scientific_name>Papilionoideae</scientific_name>
+ <synonym>Faboideae</synonym>
+ <rank>subfamily</rank>
+ </taxonomy>
+ <clade>
+ <name>SOYBN</name>
+ <taxonomy>
+ <id provider="uniprot">3847</id>
+ <code>SOYBN</code>
+ <scientific_name>Glycine max</scientific_name>
+ <authority>cv. Wye</authority>
+ <common_name>Soybean</common_name>
+ <synonym>Glycine hispida</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MEDTR</name>
+ <taxonomy>
+ <id provider="uniprot">3880</id>
+ <code>MEDTR</code>
+ <scientific_name>Medicago truncatula</scientific_name>
+ <common_name>Barrel medic</common_name>
+ <synonym>Medicago tribuloides</synonym>
+ <rank>species</rank>
+ <uri>http://crdp.ac-besancon.fr/flore/FABACEAE/photos/medicago_truncatula_30.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Rosales & Cucurbitales</name>
+ <clade>
+ <name>CUCSA</name>
+ <taxonomy>
+ <id provider="uniprot">3659</id>
+ <code>CUCSA</code>
+ <scientific_name>Cucumis sativus</scientific_name>
+ <common_name>Cucumber</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3745</id>
+ <scientific_name>Rosaceae</scientific_name>
+ <common_name>rose family</common_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>PRUPE</name>
+ <taxonomy>
+ <id provider="uniprot">3760</id>
+ <code>PRUPE</code>
+ <scientific_name>Prunus persica</scientific_name>
+ <common_name>Peach</common_name>
+ <synonym>Persica vulgaris</synonym>
+ <synonym>Amygdalus persica</synonym>
+ <rank>species</rank>
+ <uri>http://www.mezhenskyjv.narod.ru/foto_sortov/dokaz.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>FRAVE</name>
+ <taxonomy>
+ <id provider="uniprot">57918</id>
+ <code>FRAVE</code>
+ <scientific_name>Fragaria vesca</scientific_name>
+ <common_name>Woodland strawberry</common_name>
+ <synonym>Fragaria vesca L.</synonym>
+ <synonym>European strawberry</synonym>
+ <synonym>alpine strawberry</synonym>
+ <rank>species</rank>
+ <uri>http://www.boga.ruhr-uni-bochum.de/html/Fragaria.vesca.ja6.jpg</uri>
+ <uri>http://caliban.mpiz-koeln.mpg.de/thome/band3/tafel_092_small.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">91836</id>
+ <scientific_name>malvids</scientific_name>
+ <synonym>eurosids II</synonym>
+ </taxonomy>
+ <clade>
+ <name>Brassicales & Sapindales</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3699</id>
+ <scientific_name>Brassicales</scientific_name>
+ <synonym>Capparales</synonym>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3700</id>
+ <scientific_name>Brassicaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3701</id>
+ <scientific_name>Arabidopsis</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>ARATH</name>
+ <taxonomy>
+ <id provider="uniprot">3702</id>
+ <code>ARATH</code>
+ <scientific_name>Arabidopsis thaliana</scientific_name>
+ <common_name>Mouse-ear cress</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>ARALY</name>
+ <taxonomy>
+ <id provider="uniprot">59689</id>
+ <code>ARALY</code>
+ <scientific_name>Arabidopsis lyrata</scientific_name>
+ <common_name>Lyre-leaved rock-cress</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">98038</id>
+ <code>THEHA</code>
+ <scientific_name>Thellungiella halophila</scientific_name>
+ <common_name>Salt cress</common_name>
+ <rank>species</rank>
+ <uri>http://thellungiella.org/images/thellun1.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>CARPA</name>
+ <taxonomy>
+ <id provider="uniprot">3649</id>
+ <code>CARPA</code>
+ <scientific_name>Carica papaya</scientific_name>
+ <common_name>Papaya</common_name>
+ <rank>species</rank>
+ <uri>http://www.biopix.com/photos/jko-carica-papaya-00412.jpg</uri>
+ <uri>http://www.texasriviera.com/greenthumbs/papaya10.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">2706</id>
+ <scientific_name>Citrus</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>CITSI</name>
+ <taxonomy>
+ <id provider="uniprot">2711</id>
+ <code>CITSI</code>
+ <scientific_name>Citrus sinensis</scientific_name>
+ <common_name>Sweet orange</common_name>
+ <synonym>Citrus x sinensis</synonym>
+ <rank>species</rank>
+ <uri>http://www.west-crete.com/flowers/photos/citrus_sinensis-1.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CITCLE</name>
+ <taxonomy>
+ <id provider="uniprot">85681</id>
+ <scientific_name>Citrus clementina</scientific_name>
+ <synonym>Citrus clementina hort. ex Tanaka</synonym>
+ <rank>species</rank>
+ <uri>http://palmen-bolschetz.de/images/citrus%20clementine.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>EUCGR</name>
+ <taxonomy>
+ <id provider="uniprot">71139</id>
+ <code>EUCGR</code>
+ <scientific_name>Eucalyptus grandis</scientific_name>
+ <common_name>Flooded gum</common_name>
+ <rank>species</rank>
+ <uri>http://www.calflora.net/losangelesarboretum/images/eucalyptus_grandis.jpg</uri>
+ <uri>http://www.anbg.gov.au/projects/eucalypts/images/eucalyptus-grandis-bark.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>VITVI</name>
+ <taxonomy>
+ <id provider="eol">582304</id>
+ <code>VITVI</code>
+ <scientific_name>Vitis vinifera</scientific_name>
+ <common_name>Grape</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>MIMGU</name>
+ <taxonomy>
+ <id provider="uniprot">4155</id>
+ <code>MIMGU</code>
+ <scientific_name>Mimulus guttatus</scientific_name>
+ <common_name>Yellow monkey flower</common_name>
+ <synonym>Yellow monkey flower</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>AQUCA</name>
+ <taxonomy>
+ <id provider="uniprot">218851</id>
+ <code>AQUCA</code>
+ <scientific_name>Aquilegia caerulea</scientific_name>
+ <authority>E.James</authority>
+ <common_name>Rocky mountain columbine</common_name>
+ <synonym>Aquilegia coerulea</synonym>
+ <rank>species</rank>
+ <uri>http://content9.eol.org/content/2010/01/01/03/15137_large.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4479</id>
+ <scientific_name>Poaceae</scientific_name>
+ <common_name>grass family</common_name>
+ <synonym>Gramineae</synonym>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">359160</id>
+ <scientific_name>BEP clade</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4527</id>
+ <scientific_name>Oryza</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>ORYSJ</name>
+ <taxonomy>
+ <id provider="uniprot">39947</id>
+ <code>ORYSJ</code>
+ <scientific_name>Oryza sativa subsp. japonica</scientific_name>
+ <common_name>Rice</common_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>ORYSA</name>
+ <taxonomy>
+ <id provider="uniprot">4530</id>
+ <code>ORYSA</code>
+ <scientific_name>Oryza sativa</scientific_name>
+ <common_name>Rice</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>BRADI</name>
+ <taxonomy>
+ <id provider="uniprot">15368</id>
+ <code>BRADI</code>
+ <scientific_name>Brachypodium distachyon</scientific_name>
+ <common_name>Purple false brome</common_name>
+ <synonym>Trachynia distachya</synonym>
+ <rank>species</rank>
+ <uri>http://content5.eol.org/content/2011/01/15/20/16311_large.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">147369</id>
+ <scientific_name>Panicoideae</scientific_name>
+ <authority>Link, 1827</authority>
+ <synonym>Centothecoideae</synonym>
+ <rank>subfamily</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">147429</id>
+ <scientific_name>Andropogoneae</scientific_name>
+ <authority>Dumort., 1824</authority>
+ <rank>tribe</rank>
+ </taxonomy>
+ <clade>
+ <name>SORBI</name>
+ <taxonomy>
+ <id provider="uniprot">4558</id>
+ <code>SORBI</code>
+ <scientific_name>Sorghum bicolor</scientific_name>
+ <common_name>Sorghum</common_name>
+ <synonym>Sorghum vulgare</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MAIZE</name>
+ <taxonomy>
+ <id provider="uniprot">4577</id>
+ <code>MAIZE</code>
+ <scientific_name>Zea mays</scientific_name>
+ <common_name>Maize</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>SETIT</name>
+ <taxonomy>
+ <id provider="uniprot">4555</id>
+ <code>SETIT</code>
+ <scientific_name>Setaria italica</scientific_name>
+ <common_name>Foxtail millet</common_name>
+ <synonym>Panicum italicum</synonym>
+ <rank>species</rank>
+ <uri>http://en.academic.ru/pictures/enwiki/83/Setaria_italica0.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>SELMO</name>
+ <taxonomy>
+ <id provider="uniprot">34167</id>
+ <code>SELMO</code>
+ <scientific_name>Selaginella mollis</scientific_name>
+ <common_name>Moss</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>PHYPA</name>
+ <taxonomy>
+ <id provider="uniprot">145481</id>
+ <code>PHYPA</code>
+ <scientific_name>Physcomitrella patens subsp. patens</scientific_name>
+ <common_name>Moss</common_name>
+ <rank>subspecies</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3041</id>
+ <scientific_name>Chlorophyta</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">13792</id>
+ <scientific_name>Mamiellales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">70447</id>
+ <scientific_name>Ostreococcus</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>OSTLU</name>
+ <taxonomy>
+ <id provider="uniprot">436017</id>
+ <code>OSTLU</code>
+ <scientific_name>Ostreococcus lucimarinus (strain CCE9901)</scientific_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>OSTTA</name>
+ <taxonomy>
+ <id provider="uniprot">70448</id>
+ <code>OSTTA</code>
+ <scientific_name>Ostreococcus tauri</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>OSTRC</name>
+ <taxonomy>
+ <id provider="uniprot">385169</id>
+ <scientific_name>Ostreococcus sp. RCC809</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">38832</id>
+ <scientific_name>Micromonas</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>MICPC</name>
+ <taxonomy>
+ <id provider="uniprot">564608</id>
+ <code>MICPC</code>
+ <scientific_name>Micromonas pusilla (strain CCMP1545)</scientific_name>
+ <common_name>Picoplanktonic green alga</common_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MICSR</name>
+ <taxonomy>
+ <id provider="uniprot">296587</id>
+ <code>MICSR</code>
+ <scientific_name>Micromonas sp. (strain RCC299 / NOUM17)</scientific_name>
+ <common_name>Picoplanktonic green alga</common_name>
+ <synonym>Micromonas sp. RCC299</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Trebouxiophyceae_Chlorophyceae</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">3042</id>
+ <scientific_name>Chlamydomonadales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>CHLRE</name>
+ <taxonomy>
+ <id provider="uniprot">3055</id>
+ <code>CHLRE</code>
+ <scientific_name>Chlamydomonas reinhardtii</scientific_name>
+ <synonym>Chlamydomonas smithii</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>VOLCA</name>
+ <taxonomy>
+ <id provider="uniprot">3067</id>
+ <code>VOLCA</code>
+ <scientific_name>Volvox carteri</scientific_name>
+ <common_name>Green alga</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">75966</id>
+ <scientific_name>Trebouxiophyceae</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <name>CHLSP</name>
+ <taxonomy>
+ <id provider="uniprot">554065</id>
+ <scientific_name>Chlorella variabilis</scientific_name>
+ <synonym>Chlorella sp. NC64A</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CHLVUL</name>
+ <taxonomy>
+ <id provider="uniprot">574566</id>
+ <scientific_name>Coccomyxa sp. C-169</scientific_name>
+ <synonym>Chlorella vulgaris C-169</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>CYAME</name>
+ <taxonomy>
+ <id provider="uniprot">45157</id>
+ <code>CYAME</code>
+ <scientific_name>Cyanidioschyzon merolae</scientific_name>
+ <common_name>Red alga</common_name>
+ <rank>species</rank>
+ <uri>http://merolae.biol.s.u-tokyo.ac.jp/</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Chromalveolate</name>
+ <reference doi="10.1073/pnas.0712248105">
+ </reference>
+ <clade>
+ <name>Heterokonta_Alveolata</name>
+ <clade>
+ <name>Alveolata</name>
+ <taxonomy>
+ <id provider="uniprot">33630</id>
+ <scientific_name>Alveolata</scientific_name>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5794</id>
+ <scientific_name>Apicomplexa</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">422676</id>
+ <scientific_name>Aconoidasida</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5820</id>
+ <scientific_name>Plasmodium</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>PLAFA</name>
+ <taxonomy>
+ <id provider="uniprot">5833</id>
+ <code>PLAFA</code>
+ <scientific_name>Plasmodium falciparum</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>PLAYO</name>
+ <taxonomy>
+ <id provider="uniprot">73239</id>
+ <code>PLAYO</code>
+ <scientific_name>Plasmodium yoelii yoelii</scientific_name>
+ <rank>subspecies</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>PLACH</name>
+ <taxonomy>
+ <id provider="uniprot">5825</id>
+ <code>PLACH</code>
+ <scientific_name>Plasmodium chabaudi</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Theileria</name>
+ <taxonomy>
+ <id provider="uniprot">5873</id>
+ <scientific_name>Theileria</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>THEPA</name>
+ <taxonomy>
+ <id provider="uniprot">5875</id>
+ <code>THEPA</code>
+ <scientific_name>Theileria parva</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>THEAN</name>
+ <taxonomy>
+ <id provider="uniprot">5874</id>
+ <code>THEAN</code>
+ <scientific_name>Theileria annulata</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">423054</id>
+ <scientific_name>Eimeriorina</scientific_name>
+ <rank>suborder</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5806</id>
+ <scientific_name>Cryptosporidium</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>CRYHO</name>
+ <taxonomy>
+ <id provider="uniprot">237895</id>
+ <code>CRYHO</code>
+ <scientific_name>Cryptosporidium hominis</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CRYPV</name>
+ <taxonomy>
+ <id provider="uniprot">5807</id>
+ <code>CRYPV</code>
+ <scientific_name>Cryptosporidium parvum</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Eimeria & Toxoplasma</name>
+ <distribution>
+ <point geodetic_datum="?" alt_unit="?">
+ <lat>0</lat>
+ <long>0</long>
+ <alt>0</alt>
+ </point>
+ </distribution>
+ <reference doi="10.1093/molbev/msn213">
+ <desc>The Apicomplexan Whole-Genome Phylogeny: An Analysis of Incongruence among Gene Trees</desc>
+ </reference>
+ <reference>
+ </reference>
+ <clade>
+ <name>TOXGO</name>
+ <taxonomy>
+ <id provider="uniprot">5811</id>
+ <code>TOXGO</code>
+ <scientific_name>Toxoplasma gondii</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5802</id>
+ <code>EIMTE</code>
+ <scientific_name>Eimeria tenella</scientific_name>
+ <common_name>Coccidian parasite</common_name>
+ <rank>species</rank>
+ <uri>http://www.k-state.edu/parasitology/625tutorials/FIGtenella.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">6020</id>
+ <scientific_name>Oligohymenophorea</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <name>TETTH</name>
+ <taxonomy>
+ <id provider="uniprot">5911</id>
+ <code>TETTH</code>
+ <scientific_name>Tetrahymena thermophila</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>PARTE</name>
+ <taxonomy>
+ <id provider="uniprot">5888</id>
+ <code>PARTE</code>
+ <scientific_name>Paramecium tetraurelia</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Heterokonta</name>
+ <taxonomy>
+ <id provider="uniprot">33634</id>
+ <scientific_name>stramenopiles</scientific_name>
+ <synonym>Chromophyta</synonym>
+ </taxonomy>
+ <clade>
+ <name>Pelagophyceae_Bacillariophyta</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">2836</id>
+ <scientific_name>Bacillariophyta</scientific_name>
+ <common_name>diatoms</common_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">33850</id>
+ <scientific_name>Bacillariophycidae</scientific_name>
+ </taxonomy>
+ <clade>
+ <name>PHATR</name>
+ <taxonomy>
+ <id provider="eol">912693</id>
+ <code>PHATR</code>
+ <scientific_name>Phaeodactylum tricornutum</scientific_name>
+ <authority>Bohlin</authority>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>FRACY</name>
+ <taxonomy>
+ <id provider="eol">911694</id>
+ <code>FRACY</code>
+ <scientific_name>Fragilariopsis cylindrus</scientific_name>
+ <authority>Krieger</authority>
+ <synonym>Nitzschia cylindrus</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>THAPS</name>
+ <taxonomy>
+ <id provider="eol">916868</id>
+ <code>THAPS</code>
+ <scientific_name>Thalassiosira pseudonana</scientific_name>
+ <authority>Hasle & Heimdal</authority>
+ <common_name>Marine diatom</common_name>
+ <synonym>Cyclotella nana</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>AURAN</name>
+ <taxonomy>
+ <id provider="eol">912461</id>
+ <code>AURAN</code>
+ <scientific_name>Aureococcus anophagefferens</scientific_name>
+ <authority>Hargraves & Sieburth</authority>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">4783</id>
+ <scientific_name>Phytophthora</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>PHYIN</name>
+ <taxonomy>
+ <id provider="uniprot">4787</id>
+ <code>PHYIN</code>
+ <scientific_name>Phytophthora infestans</scientific_name>
+ <common_name>Potato late blight fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>PHYRM</name>
+ <taxonomy>
+ <id provider="uniprot">164328</id>
+ <code>PHYRM</code>
+ <scientific_name>Phytophthora ramorum</scientific_name>
+ <common_name>Sudden oak death agent</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>PHYSO</name>
+ <taxonomy>
+ <id provider="uniprot">67593</id>
+ <scientific_name>Phytophthora sojae</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>EMIHU</name>
+ <taxonomy>
+ <id provider="uniprot">2903</id>
+ <code>EMIHU</code>
+ <scientific_name>Emiliania huxleyi</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>Excavata</name>
+ <reference doi="10.1038/nature04546">
+ </reference>
+ <clade>
+ <name>Kinetoplastida_Heterolobosea</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5654</id>
+ <scientific_name>Trypanosomatidae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>LEIMA</name>
+ <taxonomy>
+ <id provider="uniprot">5664</id>
+ <code>LEIMA</code>
+ <scientific_name>Leishmania major</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>TRYBB</name>
+ <taxonomy>
+ <id provider="uniprot">5702</id>
+ <code>TRYBB</code>
+ <scientific_name>Trypanosoma brucei brucei</scientific_name>
+ <rank>subspecies</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>NAEGR</name>
+ <taxonomy>
+ <id provider="uniprot">5762</id>
+ <code>NAEGR</code>
+ <scientific_name>Naegleria gruberi</scientific_name>
+ <common_name>Amoeba</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>Metamonada</name>
+ <clade>
+ <name>GIALA</name>
+ <taxonomy>
+ <id provider="uniprot">5741</id>
+ <code>GIALA</code>
+ <scientific_name>Giardia lamblia</scientific_name>
+ <synonym>Giardia intestinalis</synonym>
+ <synonym>Giardia lamblia</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>TRIVA</name>
+ <taxonomy>
+ <id provider="uniprot">5722</id>
+ <code>TRIVA</code>
+ <scientific_name>Trichomonas vaginalis</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">2157</id>
+ <scientific_name>Archaea</scientific_name>
+ <rank>superkingdom</rank>
+ </taxonomy>
+ <clade>
+ <name>a5</name>
+ <clade>
+ <name>a1</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">183924</id>
+ <scientific_name>Thermoprotei</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <name>AERPE</name>
+ <taxonomy>
+ <id provider="uniprot">272557</id>
+ <code>AERPE</code>
+ <scientific_name>Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)</scientific_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>SULSO</name>
+ <taxonomy>
+ <id provider="uniprot">273057</id>
+ <code>SULSO</code>
+ <scientific_name>Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">2302</id>
+ <scientific_name>Thermoplasma</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>THEVO</name>
+ <taxonomy>
+ <id provider="uniprot">273116</id>
+ <code>THEVO</code>
+ <scientific_name>Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)</scientific_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>THEAC</name>
+ <taxonomy>
+ <id provider="uniprot">273075</id>
+ <code>THEAC</code>
+ <scientific_name>Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">28890</id>
+ <scientific_name>Euryarchaeota</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <name>a4</name>
+ <clade>
+ <name>a3</name>
+ <clade>
+ <name>a2</name>
+ <clade>
+ <name>METKA</name>
+ <taxonomy>
+ <id provider="uniprot">190192</id>
+ <code>METKA</code>
+ <scientific_name>Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)</scientific_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>METJA</name>
+ <taxonomy>
+ <id provider="uniprot">243232</id>
+ <code>METJA</code>
+ <scientific_name>Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)</scientific_name>
+ <synonym>Methanococcus jannaschii</synonym>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>METTH</name>
+ <taxonomy>
+ <id provider="uniprot">187420</id>
+ <code>METTH</code>
+ <scientific_name>Methanobacterium thermoautotrophicum (strain Delta H)</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>ARCFU</name>
+ <taxonomy>
+ <id provider="uniprot">224325</id>
+ <code>ARCFU</code>
+ <scientific_name>Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">2260</id>
+ <scientific_name>Pyrococcus</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>PYRAB</name>
+ <taxonomy>
+ <id provider="uniprot">272844</id>
+ <code>PYRAB</code>
+ <scientific_name>Pyrococcus abyssi (strain GE5 / Orsay)</scientific_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>PYRHO</name>
+ <taxonomy>
+ <id provider="uniprot">70601</id>
+ <code>PYRHO</code>
+ <scientific_name>Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>HALSP</name>
+ <taxonomy>
+ <id provider="uniprot">2243</id>
+ <code>HALSP</code>
+ <scientific_name>Halobacterium sp.</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">2</id>
+ <scientific_name>Bacteria</scientific_name>
+ <rank>superkingdom</rank>
+ </taxonomy>
+ <clade>
+ <name>b9</name>
+ <clade>
+ <name>b2</name>
+ <clade>
+ <name>b1</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">213849</id>
+ <scientific_name>Campylobacterales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>HELPH</name>
+ <taxonomy>
+ <id provider="uniprot">357544</id>
+ <code>HELPH</code>
+ <scientific_name>Helicobacter pylori (strain HPAG1)</scientific_name>
+ <synonym>Campylobacter pylori</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>CAMJE</name>
+ <taxonomy>
+ <id provider="uniprot">197</id>
+ <code>CAMJE</code>
+ <scientific_name>Campylobacter jejuni</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>AQUAE</name>
+ <taxonomy>
+ <id provider="uniprot">63363</id>
+ <code>AQUAE</code>
+ <scientific_name>Aquifex aeolicus</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>b3</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">2092</id>
+ <scientific_name>Mycoplasmataceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <scientific_name>Mycoplasma</scientific_name>
+ </taxonomy>
+ <clade>
+ <name>MYCGE</name>
+ <taxonomy>
+ <id provider="uniprot">243273</id>
+ <code>MYCGE</code>
+ <scientific_name>Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195)</scientific_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MYCPN</name>
+ <taxonomy>
+ <id provider="uniprot">272634</id>
+ <code>MYCPN</code>
+ <scientific_name>Mycoplasma pneumoniae (strain ATCC 29342 / M129)</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>UREPA</name>
+ <taxonomy>
+ <id provider="uniprot">134821</id>
+ <code>UREPA</code>
+ <scientific_name>Ureaplasma parvum</scientific_name>
+ <synonym>Ureaplasma urealyticum biotype 1</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>BORBU</name>
+ <taxonomy>
+ <id provider="uniprot">139</id>
+ <code>BORBU</code>
+ <scientific_name>Borrelia burgdorferi</scientific_name>
+ <common_name>Lyme disease spirochete</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>b8</name>
+ <clade>
+ <name>b6</name>
+ <clade>
+ <name>b5</name>
+ <clade>
+ <name>b4</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">1117</id>
+ <scientific_name>Cyanobacteria</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <name>NOSS7</name>
+ <taxonomy>
+ <id provider="uniprot">28072</id>
+ <code>NOSS7</code>
+ <scientific_name>Nostoc sp. (strain PCC 7524)</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>SYNY3</name>
+ <taxonomy>
+ <id provider="uniprot">1148</id>
+ <code>SYNY3</code>
+ <scientific_name>Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1)</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>DEIRA</name>
+ <taxonomy>
+ <id provider="uniprot">1299</id>
+ <code>DEIRA</code>
+ <scientific_name>Deinococcus radiodurans</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>MYCTU</name>
+ <taxonomy>
+ <id provider="uniprot">1773</id>
+ <code>MYCTU</code>
+ <scientific_name>Mycobacterium tuberculosis</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">1236</id>
+ <scientific_name>Gammaproteobacteria</scientific_name>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <name>b7</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">543</id>
+ <scientific_name>Enterobacteriaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>ECOLI</name>
+ <taxonomy>
+ <id provider="uniprot">83333</id>
+ <code>ECOLI</code>
+ <scientific_name>Escherichia coli (strain K12)</scientific_name>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>SALTY</name>
+ <taxonomy>
+ <id provider="uniprot">90371</id>
+ <code>SALTY</code>
+ <scientific_name>Salmonella typhimurium</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>VIBCH</name>
+ <taxonomy>
+ <id provider="uniprot">666</id>
+ <code>VIBCH</code>
+ <scientific_name>Vibrio cholerae</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>HAEIN</name>
+ <taxonomy>
+ <id provider="uniprot">71421</id>
+ <code>HAEIN</code>
+ <scientific_name>Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">1239</id>
+ <scientific_name>Firmicutes</scientific_name>
+ <rank>phylum</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">91061</id>
+ <scientific_name>Bacilli</scientific_name>
+ <synonym>Bacillus/Lactobacillus/Streptococcus group</synonym>
+ <rank>class</rank>
+ </taxonomy>
+ <clade>
+ <name>STRPN</name>
+ <taxonomy>
+ <id provider="uniprot">1313</id>
+ <code>STRPN</code>
+ <scientific_name>Streptococcus pneumoniae</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>BACSU</name>
+ <taxonomy>
+ <id provider="uniprot">1423</id>
+ <code>BACSU</code>
+ <scientific_name>Bacillus subtilis</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>EUBR3</name>
+ <taxonomy>
+ <id provider="uniprot">515619</id>
+ <code>EUBR3</code>
+ <scientific_name>Eubacterium rectale (strain ATCC 33656 / VPI 0990)</scientific_name>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+ <clade>
+ <name>BACTN</name>
+ <taxonomy>
+ <id provider="uniprot">818</id>
+ <code>BACTN</code>
+ <scientific_name>Bacteroides thetaiotaomicron</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>THEMA</name>
+ <taxonomy>
+ <id provider="uniprot">2336</id>
+ <code>THEMA</code>
+ <scientific_name>Thermotoga maritima</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ </clade>
+</phylogeny>
+</phyloxml>
\ No newline at end of file
git://source.jalview.org / jalview.git / commitdiff