added tree as an applet to application servlet parameter

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index e17af38..af5a15d 100755 (executable)
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -997,6 +997,14 @@ public class AlignFrame
           "userDefinedColour"))
           );
     }
+    if (viewport.applet.getParameter("tree")!=null)
+    {
+      url.append("&tree="+appendProtocol(viewport.applet.getParameter("tree")));
+    }
+    if (viewport.applet.getParameter("treeFile")!=null)
+    {
+      url.append("&tree="+appendProtocol(viewport.applet.getParameter("treeFile")));
+    }
 
     showURL(url.toString(), "FULL_APP");
   }