JAL-3878 Create web service menu manager.
authorMateusz Warowny <mmzwarowny@dundee.ac.uk>
Fri, 11 Mar 2022 14:46:17 +0000 (15:46 +0100)
committerMateusz Warowny <mmzwarowny@dundee.ac.uk>
Fri, 11 Mar 2022 14:46:17 +0000 (15:46 +0100)
src/jalview/ws2/api/Credentials.java
src/jalview/ws2/gui/WebServicesMenuManager.java [new file with mode: 0644]

index 462c048..cc7c714 100644 (file)
@@ -7,10 +7,16 @@ public final class Credentials
   String username = null;
   String email = null;
   String password = null;
-  
+  private static final Credentials EMPTY = new Credentials();
+
   private Credentials() {
   }
   
+  public static final Credentials empty()
+  {
+    return EMPTY;
+  }
+
   public static final Credentials usingEmail(String email) {
     Objects.requireNonNull(email);
     if (email.isEmpty())
diff --git a/src/jalview/ws2/gui/WebServicesMenuManager.java b/src/jalview/ws2/gui/WebServicesMenuManager.java
new file mode 100644 (file)
index 0000000..188f587
--- /dev/null
@@ -0,0 +1,279 @@
+package jalview.ws2.gui;
+
+import java.awt.Color;
+import java.awt.event.MouseAdapter;
+import java.awt.event.MouseEvent;
+import java.net.URL;
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.Collections;
+import java.util.Comparator;
+import java.util.HashMap;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Map;
+import java.util.Objects;
+import java.util.TreeMap;
+import java.util.concurrent.CompletionStage;
+
+import javax.swing.JMenu;
+import javax.swing.JMenuItem;
+import javax.swing.ToolTipManager;
+
+import jalview.gui.AlignFrame;
+import jalview.gui.Desktop;
+import jalview.gui.JvSwingUtils;
+import jalview.gui.WsJobParameters;
+import jalview.util.MessageManager;
+import jalview.viewmodel.AlignmentViewport;
+import jalview.ws.params.ArgumentI;
+import jalview.ws.params.ParamDatastoreI;
+import jalview.ws.params.WsParamSetI;
+import jalview.ws2.actions.alignment.AlignmentAction;
+import jalview.ws2.actions.api.ActionI;
+import jalview.ws2.actions.api.TaskI;
+import jalview.ws2.api.Credentials;
+import jalview.ws2.api.WebService;
+import jalview.ws2.client.api.WebServiceProviderI;
+
+public class WebServicesMenuManager
+{
+  private final JMenu menu;
+
+  private final AlignFrame frame;
+
+  private JMenuItem inProgressItem = new JMenuItem("Service discovery in progress");
+
+  private JMenuItem noServicesItem = new JMenuItem("No services available");
+  {
+    inProgressItem.setEnabled(false);
+    inProgressItem.setVisible(false);
+    noServicesItem.setEnabled(false);
+  }
+
+  public WebServicesMenuManager(String name, AlignFrame frame)
+  {
+    this.frame = frame;
+    menu = new JMenu(name);
+    menu.add(inProgressItem);
+    menu.add(noServicesItem);
+  }
+
+  public JMenu getMenu()
+  {
+    return menu;
+  }
+
+  public void setNoServices(boolean noServices)
+  {
+    noServicesItem.setVisible(noServices);
+  }
+
+  public void setInProgress(boolean inProgress)
+  {
+    inProgressItem.setVisible(inProgress);
+  }
+
+  public void setServices(WebServiceProviderI services)
+  {
+    menu.removeAll();
+    // services grouped by their category
+    Map<String, List<WebService<?>>> oneshotServices = new HashMap<>();
+    Map<String, List<WebService<?>>> interactiveServices = new HashMap<>();
+    for (WebService<?> service : services.getServices())
+    {
+      var map = service.isInteractive() ? interactiveServices : oneshotServices;
+      map.computeIfAbsent(service.getCategory(), k -> new ArrayList<>())
+          .add(service);
+    }
+    var allKeysSet = new HashSet<>(oneshotServices.keySet());
+    allKeysSet.addAll(interactiveServices.keySet());
+    var allKeys = new ArrayList<>(allKeysSet);
+    allKeys.sort(Comparator.naturalOrder());
+    for (String category : allKeys)
+    {
+      var categoryMenu = new JMenu(category);
+      var oneshot = oneshotServices.get(category);
+      if (oneshot != null)
+        addOneshotEntries(oneshot, categoryMenu);
+      var interactive = interactiveServices.get(category);
+      if (interactive != null)
+      {
+        if (oneshot != null)
+          categoryMenu.addSeparator();
+        // addInteractiveEntries(interactive, categoryMenu);
+      }
+      menu.add(categoryMenu);
+    }
+    menu.add(inProgressItem);
+    menu.add(noServicesItem);
+  }
+
+  private void addOneshotEntries(List<WebService<?>> services, JMenu menu)
+  {
+    services.sort(Comparator
+        .<WebService<?>, String> comparing(s -> s.getUrl().toString())
+        .thenComparing(WebService::getName));
+    URL lastHost = null;
+    for (WebService<?> service : services)
+    {
+      // if new host differs from the last one, add entry separating them
+      URL host = service.getUrl();
+      if (!host.equals(lastHost))
+      {
+        if (lastHost != null)
+          menu.addSeparator();
+        var item = new JMenuItem(host.toString());
+        item.setForeground(Color.BLUE);
+        item.addActionListener(e -> Desktop.showUrl(host.toString()));
+        menu.add(item);
+        lastHost = host;
+      }
+      menu.addSeparator();
+      // group actions by their subcategory, sorted
+      var actionsByCategory = new TreeMap<String, List<ActionI<?>>>();
+      for (ActionI<?> action : service.getActions())
+      {
+        actionsByCategory
+            .computeIfAbsent(
+                Objects.requireNonNullElse(action.getSubcategory(), ""),
+                k -> new ArrayList<>())
+            .add(action);
+      }
+      actionsByCategory.forEach((k, v) -> {
+        // create submenu named {subcategory} with {service} or use root menu
+        var atMenu = k.isEmpty() ? menu : new JMenu(String.format("%s with %s", k, service.getName()));
+        if (atMenu != menu)
+          menu.add(atMenu); // add only if submenu
+        // sort actions by name pulling nulls to the front
+        v.sort(Comparator.comparing(
+            ActionI::getName, Comparator.nullsFirst(Comparator.naturalOrder())));
+        for (ActionI<?> action : v)
+        {
+          addEntriesForAction(action, atMenu, atMenu == menu);
+        }
+      });
+    }
+  }
+
+  private void addEntriesForAction(ActionI<?> action, JMenu menu, boolean isTopLevel)
+  {
+    var service = action.getWebService();
+    String itemName;
+    if (isTopLevel)
+    {
+      itemName = service.getName();
+      if (action.getName() != null && !action.getName().isEmpty())
+        itemName += " " + action.getName();
+    }
+    else
+    {
+      if (action.getName() == null || action.getName().isEmpty())
+        itemName = "Run";
+      else
+        itemName = action.getName();
+    }
+    var datastore = service.getParamDatastore();
+    {
+      String text = itemName;
+      if (datastore.hasParameters() || datastore.hasPresets())
+        text += "with defaults";
+      JMenuItem item = new JMenuItem(text);
+      item.addActionListener(e -> {
+        runAction(action, frame.getCurrentView(), Collections.emptyList(),
+            Credentials.empty());
+      });
+      menu.add(item);
+    }
+    if (datastore.hasParameters())
+    {
+      JMenuItem item = new JMenuItem("Edit settings and run...");
+      item.addActionListener(e -> {
+        openEditParamsDialog(datastore, null, null).thenAccept(args -> {
+          if (args != null)
+            runAction(action, frame.getCurrentView(), args, Credentials.empty());
+        });
+      });
+      menu.add(item);
+    }
+    var presets = datastore.getPresets();
+    if (presets != null && presets.size() > 0)
+    {
+      final var presetsMenu = new JMenu(MessageManager.formatMessage(
+          "label.run_with_preset_params", service.getName()));
+      final int dismissDelay = ToolTipManager.sharedInstance()
+          .getDismissDelay();
+      final int QUICK_TOOLTIP = 1500;
+      for (var preset : presets)
+      {
+        var item = new JMenuItem(preset.getName());
+        item.addMouseListener(new MouseAdapter()
+        {
+          @Override
+          public void mouseEntered(MouseEvent evt)
+          {
+            ToolTipManager.sharedInstance().setDismissDelay(QUICK_TOOLTIP);
+          }
+
+          @Override
+          public void mouseExited(MouseEvent evt)
+          {
+            ToolTipManager.sharedInstance().setDismissDelay(dismissDelay);
+          }
+        });
+        String tooltipTitle = MessageManager.getString(
+            preset.isModifiable() ? "label.user_preset" : "label.service_preset");
+        String tooltip = String.format("<strong>%s</strong><br/>%s",
+            tooltipTitle, preset.getDescription());
+        tooltip = JvSwingUtils.wrapTooltip(true, tooltip);
+        item.setToolTipText(tooltip);
+        item.addActionListener(event -> {
+          runAction(action, frame.getCurrentView(), preset.getArguments(),
+              Credentials.empty());
+        });
+        presetsMenu.add(item);
+      }
+      menu.add(presetsMenu);
+    }
+  }
+
+  private TaskI<?> runAction(ActionI<?> action, AlignmentViewport viewport,
+      List<ArgumentI> args, Credentials credentials)
+  {
+    // casting and instance checks can be avoided with some effort,
+    // let them be for now.
+    if (action instanceof AlignmentAction)
+    {
+      // TODO: test if selection contains enough sequences
+      var _action = (AlignmentAction) action;
+      var handler = new AlignmentServiceGuiHandler(_action, frame);
+      return _action.perform(viewport, args, credentials, handler);
+    }
+    throw new IllegalArgumentException(
+        String.format("Illegal action type %s", action.getClass().getName()));
+  }
+
+  private static CompletionStage<List<ArgumentI>> openEditParamsDialog(
+      ParamDatastoreI paramStore, WsParamSetI preset, List<ArgumentI> arguments)
+  {
+    final WsJobParameters jobParams;
+    if (preset == null && arguments != null && arguments.size() > 0)
+      jobParams = new WsJobParameters(paramStore, preset, arguments);
+    else
+      jobParams = new WsJobParameters(paramStore, preset, null);
+    if (preset != null)
+      jobParams.setName(MessageManager.getString(
+          "label.adjusting_parameters_for_calculation"));
+    var stage = jobParams.showRunDialog();
+    return stage.thenApply(startJob -> {
+      if (!startJob)
+        return null; // null if cancelled
+      if (jobParams.getPreset() != null)
+        return jobParams.getPreset().getArguments();
+      if (jobParams.isServiceDefaults())
+        return Collections.emptyList();
+      else
+        return jobParams.getJobParams();
+    });
+  }
+}