@Test(groups = "Functional")
public void testSetStatusReturnsPosOrMinusOne()
{
- SequenceI seq1 = new Sequence("Seq1", "ABCDEFGHIJ");
- SequenceI seq2 = new Sequence("Seq2", "AB--EFGHIJ");
+ SequenceI seq1 = new Sequence("Seq1", "AACDE");
+ SequenceI seq2 = new Sequence("Seq2", "AA--E");
AlignmentI al = new Alignment(new SequenceI[] { seq1, seq2 });
AlignFrame alignFrame = new AlignFrame(al, al.getWidth(),
al.getHeight());
AlignmentI visAl = alignFrame.getViewport().getAlignment();
// Test either side of gap
+ // This first assert fails due to JAL-2563
assertEquals(
alignFrame.alignPanel.getSeqPanel().setStatusMessage(
visAl.getSequenceAt(1), 1, 1), 2);