<!-- JAL-1767,JAL-2647 -->Principal Components Analysis results
and Viewer state saved in Jalview Project
</li>
- <li>'Change parameters' option removed from viewer's
+ <li><!-- JAL-2962 -->'Change parameters' option removed from viewer's
drop-down menus</li>
<li>
<!-- JAL-2975 -->Can use shift + arrow keys to rotate PCA image
<!-- JAL-3003 -->Added remarks about transparent rendering effects
not supported in EPS figure export
</li>
+ <li><!-- JAL-2903 -->Typos in documentation for Preferences dialog</li>
</ul> <em>Development and Release Processes</em>
<ul>
<li>
<!-- JAL-868 -->Structure colours not updated when associated tree
repartitions the alignment view (Regression in 2.10.5)
</li>
-
</ul>
- <em>New Known Defects</em>
+ <em>Datamodel</em>
+ <ul>
+ <li>
+ <!-- JAL-2986 -->Sequence.findIndex returns wrong value when
+ sequence's End is greater than its length
+ </li>
+ </ul> <em>New Known Defects</em>
<ul>
<li>
<!-- JAL-3313 -->Codon consensus logo incorrectly scaled in gapped