ensure propagation of colour change on annotation update (JAL-868)

diff --git a/src/jalview/appletgui/AlignmentPanel.java b/src/jalview/appletgui/AlignmentPanel.java
index ebe5785..7104355 100644 (file)
--- a/src/jalview/appletgui/AlignmentPanel.java
+++ b/src/jalview/appletgui/AlignmentPanel.java
@@ -455,7 +455,7 @@ public class AlignmentPanel extends Panel implements AdjustmentListener, Alignme
     apvscroll.addNotify();
     hscroll.addNotify();
     validate();
-    repaint();
+    paintAlignment(true);
   }
   /**
    * calculate the annotation dimensions and refresh slider values accordingly.

diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index d2aa6d6..a088aa3 100644 (file)
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -396,7 +396,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
     }
     validateAnnotationDimensions(true);
     addNotify();
-    repaint();
+    paintAlignment(true);
   }
   /**
    * calculate the annotation dimensions and refresh slider values accordingly.