Use newFeatures flag

diff --git a/src/jalview/gui/FeatureRenderer.java b/src/jalview/gui/FeatureRenderer.java
index c47b958..40a924a 100755 (executable)
--- a/src/jalview/gui/FeatureRenderer.java
+++ b/src/jalview/gui/FeatureRenderer.java
@@ -552,15 +552,16 @@ public class FeatureRenderer
   }
   public Color getColour(String featureType)
   {
-    Color colour = (Color) featureColours.get(featureType);
-    if (colour == null)
+    if (featureColours.get(featureType) == null)
     {
       jalview.schemes.UserColourScheme ucs = new
-        jalview.schemes.UserColourScheme();
-      featureColours.put(featureType,
-                         colour=ucs.createColourFromName(featureType));
+          jalview.schemes.UserColourScheme();
+      Color col = ucs.createColourFromName(featureType);
+      featureColours.put(featureType, col);
+      return col;
     }
-    return colour;
+    else
+      return (Color) featureColours.get(featureType);
   }
 
   static String lastFeatureAdded;
@@ -612,7 +613,7 @@ public class FeatureRenderer
 
     ///////////////////////////////////////
     ///MULTIPLE FEATURES AT SELECTED RESIDUE
-    if(features.length>1)
+    if(!newFeatures && features.length>1)
     {
      panel = new JPanel(new GridLayout(4, 1));
      tmp = new JPanel();
@@ -640,8 +641,6 @@ public class FeatureRenderer
            source.setText(features[index].getFeatureGroup());
            start.setValue(new Integer(features[index].getBegin()));
            end.setValue(new Integer(features[index].getEnd()));
-           colour.setBackground(
-               getColour(features[index].getType()));
 
            SearchResults highlight = new SearchResults();
            highlight.addResult(sequences[0],
@@ -693,13 +692,6 @@ public class FeatureRenderer
     description.setLineWrap(true);
     panel.add(new JScrollPane(description));
 
-    name.setText(features[0].type);
-    source.setText(features[0].featureGroup);
-    start.setValue(new Integer(features[0].getBegin()));
-    end.setValue(new Integer(features[0].getEnd()));
-    colour.setBackground( getColour(features[0].type) );
-    description.setText(features[0].getDescription());
-
     if (!newFeatures)
     {
       bigPanel.add(panel, BorderLayout.SOUTH);
@@ -740,6 +732,13 @@ public class FeatureRenderer
       }
     }
 
+    name.setText(lastFeatureAdded);
+    source.setText(lastFeatureGroupAdded);
+    start.setValue(new Integer(features[0].getBegin()));
+    end.setValue(new Integer(features[0].getEnd()));
+    colour.setBackground( getColour(lastFeatureAdded) );
+    description.setText(features[0].getDescription());
+
 
     Object[] options;
     if (!newFeatures)
@@ -849,10 +848,7 @@ public class FeatureRenderer
       }
     }
 
-   // if (name.getSelectedIndex() == -1)
-    {
-  //    findAllFeatures();
-    }
+    findAllFeatures();
 
     return true;
   }