<reference doi="10.1002/bies.200900053">
<desc>The new framework for understanding placental mammal evolution</desc>
</reference>
- <reference>
- </reference>
- <reference>
- </reference>
<clade>
<taxonomy>
<scientific_name>Boreoeutheria</scientific_name>
<common_name>Human</common_name>
<rank>species</rank>
<uri>http://www.thehindu.com/multimedia/dynamic/00029/IN05_DARWIN_29896f.jpg</uri>
- <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/e/e5/Steve_Jobs_WWDC07.jpg/170px-Steve_Jobs_WWDC07.jpg</uri>
</taxonomy>
</clade>
<clade>
<taxonomy>
<id provider="uniprot">147538</id>
<scientific_name>Pezizomycotina</scientific_name>
+ <synonym>Euascomycota</synonym>
<rank>subphylum</rank>
</taxonomy>
+ <reference doi="0.3852/mycologia.98.6.1018">
+ <desc>A five-gene phylogeny of Pezizomycotina</desc>
+ </reference>
+ <reference>
+ </reference>
<clade>
- <name>Sordariomycetes & Leotiomycetes & Dothideomycetes & Eurotiales</name>
+ <taxonomy>
+ <id provider="uniprot">716546</id>
+ <scientific_name>Leotiomyceta</scientific_name>
+ </taxonomy>
<clade>
- <name>Sordariomycetes & Leotiomycetes & Dothideomycetes</name>
+ <name>Sordariomyceta & Dothideomycetes & Trichocomaceae & Lecanoromycetes</name>
+ <taxonomy>
+ </taxonomy>
<clade>
- <taxonomy>
- <id provider="uniprot">147541</id>
- <scientific_name>Dothideomycetes</scientific_name>
- <rank>class</rank>
- </taxonomy>
- <reference doi="10.3114/sim.2009.64.01">
- <desc>A class-wide phylogenetic assessment of Dothideomycetes</desc>
- </reference>
+ <name>Sordariomyceta & Dothideomycetes & Lecanoromycetes</name>
<clade>
<taxonomy>
- <id provider="uniprot">134362</id>
- <scientific_name>Capnodiales</scientific_name>
- <rank>order</rank>
+ <id provider="uniprot">147541</id>
+ <scientific_name>Dothideomycetes</scientific_name>
+ <rank>class</rank>
</taxonomy>
+ <reference doi="10.3114/sim.2009.64.01">
+ <desc>A class-wide phylogenetic assessment of Dothideomycetes</desc>
+ </reference>
<clade>
<taxonomy>
- <id provider="uniprot">41254</id>
- <scientific_name>Mycosphaerella</scientific_name>
- <rank>genus</rank>
+ <id provider="uniprot">134362</id>
+ <scientific_name>Capnodiales</scientific_name>
+ <rank>order</rank>
</taxonomy>
<clade>
- <name>MYCFI</name>
<taxonomy>
- <id provider="uniprot">83344</id>
- <scientific_name>Mycosphaerella fijiensis</scientific_name>
- <rank>species</rank>
- </taxonomy>
- </clade>
- <clade>
- <name>MYCGR</name>
- <taxonomy>
- <id provider="uniprot">54734</id>
- <code>MYCGR</code>
- <scientific_name>Mycosphaerella graminicola</scientific_name>
- <common_name>Speckled leaf blotch fungus</common_name>
- <synonym>Septoria tritici</synonym>
- <rank>species</rank>
- </taxonomy>
- </clade>
- <clade>
- <name>MYCPOP</name>
- <taxonomy>
- <id provider="uniprot">85929</id>
- <scientific_name>Mycosphaerella populorum</scientific_name>
- <synonym>Septoria musiva</synonym>
- <rank>species</rank>
+ <id provider="uniprot">41254</id>
+ <scientific_name>Mycosphaerella</scientific_name>
+ <rank>genus</rank>
</taxonomy>
+ <clade>
+ <name>MYCFI</name>
+ <taxonomy>
+ <id provider="uniprot">83344</id>
+ <scientific_name>Mycosphaerella fijiensis</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MYCGR</name>
+ <taxonomy>
+ <id provider="uniprot">54734</id>
+ <code>MYCGR</code>
+ <scientific_name>Mycosphaerella graminicola</scientific_name>
+ <common_name>Speckled leaf blotch fungus</common_name>
+ <synonym>Septoria tritici</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MYCPOP</name>
+ <taxonomy>
+ <id provider="uniprot">85929</id>
+ <scientific_name>Mycosphaerella populorum</scientific_name>
+ <synonym>Septoria musiva</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MYCPJ</name>
+ <taxonomy>
+ <id provider="uniprot">64363</id>
+ <code>MYCPJ</code>
+ <scientific_name>Mycosphaerella pini</scientific_name>
+ <common_name>Red band needle blight disease fungus</common_name>
+ <synonym>Dothistroma septosporum</synonym>
+ <synonym>Dothistroma pini</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
</clade>
<clade>
- <name>MYCPJ</name>
<taxonomy>
- <id provider="uniprot">64363</id>
- <code>MYCPJ</code>
- <scientific_name>Mycosphaerella pini</scientific_name>
- <common_name>Red band needle blight disease fungus</common_name>
- <synonym>Dothistroma septosporum</synonym>
- <synonym>Dothistroma pini</synonym>
+ <id provider="uniprot">430998</id>
+ <code>BAUCOM</code>
+ <scientific_name>Baudoinia compniacensis</scientific_name>
<rank>species</rank>
+ <uri>http://www.diark.org/img/species_pict/Baudoinia_compniacensis</uri>
</taxonomy>
</clade>
</clade>
<clade>
<taxonomy>
- <id provider="uniprot">430998</id>
- <code>BAUCOM</code>
- <scientific_name>Baudoinia compniacensis</scientific_name>
- <rank>species</rank>
- <uri>http://www.diark.org/img/species_pict/Baudoinia_compniacensis</uri>
- </taxonomy>
- </clade>
- </clade>
- <clade>
- <taxonomy>
- <id provider="uniprot">715340</id>
- <scientific_name>Pleosporineae</scientific_name>
- <rank>suborder</rank>
- </taxonomy>
- <clade>
- <taxonomy>
- <id provider="uniprot">28556</id>
- <scientific_name>Pleosporaceae</scientific_name>
- <rank>family</rank>
+ <id provider="uniprot">715340</id>
+ <scientific_name>Pleosporineae</scientific_name>
+ <rank>suborder</rank>
</taxonomy>
<clade>
- <name>Cochliobolus & Setosphaeria</name>
+ <taxonomy>
+ <id provider="uniprot">28556</id>
+ <scientific_name>Pleosporaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
<clade>
- <taxonomy>
- <id provider="uniprot">5015</id>
- <scientific_name>Cochliobolus</scientific_name>
- <rank>genus</rank>
- </taxonomy>
+ <name>Cochliobolus & Setosphaeria</name>
<clade>
- <name>COCHE</name>
<taxonomy>
- <id provider="uniprot">5016</id>
- <code>COCHE</code>
- <scientific_name>Cochliobolus heterostrophus</scientific_name>
- <synonym>Drechslera maydis</synonym>
- <rank>species</rank>
+ <id provider="uniprot">5015</id>
+ <scientific_name>Cochliobolus</scientific_name>
+ <rank>genus</rank>
</taxonomy>
+ <clade>
+ <name>COCHE</name>
+ <taxonomy>
+ <id provider="uniprot">5016</id>
+ <code>COCHE</code>
+ <scientific_name>Cochliobolus heterostrophus</scientific_name>
+ <synonym>Drechslera maydis</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">45130</id>
+ <code>COCSA</code>
+ <scientific_name>Cochliobolus sativus</scientific_name>
+ <synonym>Bipolaris sorokiniana</synonym>
+ <rank>species</rank>
+ <uri>http://www.plantmanagementnetwork.org/pub/php/diagnosticguide/2003/rootrot/image/mathre6sm.jpg</uri>
+ </taxonomy>
+ </clade>
</clade>
<clade>
<taxonomy>
- <id provider="uniprot">45130</id>
- <code>COCSA</code>
- <scientific_name>Cochliobolus sativus</scientific_name>
- <synonym>Bipolaris sorokiniana</synonym>
+ <id provider="uniprot">93612</id>
+ <code>SETTU</code>
+ <scientific_name>Setosphaeria turcica</scientific_name>
+ <authority>(Luttr.) K.J. Leonard & Suggs, (1974)</authority>
+ <common_name>Northern corn leaf blight disease fungus</common_name>
+ <synonym>Exserohilum turcicum</synonym>
+ <synonym>Helminthosporium turcicum</synonym>
<rank>species</rank>
- <uri>http://www.plantmanagementnetwork.org/pub/php/diagnosticguide/2003/rootrot/image/mathre6sm.jpg</uri>
+ <uri>http://www.pflanzenkrankheiten.ch/diseases/STU/figures_STU/HTU_Mais_Mik_7_k.jpg</uri>
+ <uri>http://www.pflanzenkrankheiten.ch/diseases/STU/figures_STU/Exserohilum_turcicum_001_k.jpg</uri>
</taxonomy>
</clade>
</clade>
<clade>
+ <name>PYRTR</name>
<taxonomy>
- <id provider="uniprot">93612</id>
- <code>SETTU</code>
- <scientific_name>Setosphaeria turcica</scientific_name>
- <authority>(Luttr.) K.J. Leonard & Suggs, (1974)</authority>
- <common_name>Northern corn leaf blight disease fungus</common_name>
- <synonym>Exserohilum turcicum</synonym>
- <synonym>Helminthosporium turcicum</synonym>
- <rank>species</rank>
- <uri>http://www.pflanzenkrankheiten.ch/diseases/STU/figures_STU/HTU_Mais_Mik_7_k.jpg</uri>
- <uri>http://www.pflanzenkrankheiten.ch/diseases/STU/figures_STU/Exserohilum_turcicum_001_k.jpg</uri>
+ <id provider="uniprot">426418</id>
+ <code>PYRTR</code>
+ <scientific_name>Pyrenophora tritici-repentis (strain Pt-1C-BFP)</scientific_name>
+ <common_name>Wheat tan spot fungus</common_name>
+ <synonym>Drechslera tritici-repentis</synonym>
</taxonomy>
</clade>
</clade>
<clade>
- <name>PYRTR</name>
+ <name>PHANO</name>
<taxonomy>
- <id provider="uniprot">426418</id>
- <code>PYRTR</code>
- <scientific_name>Pyrenophora tritici-repentis (strain Pt-1C-BFP)</scientific_name>
- <common_name>Wheat tan spot fungus</common_name>
- <synonym>Drechslera tritici-repentis</synonym>
+ <id provider="uniprot">13684</id>
+ <code>PHANO</code>
+ <scientific_name>Phaeosphaeria nodorum</scientific_name>
+ <common_name>Glume blotch fungus</common_name>
+ <synonym>Septoria nodorum</synonym>
+ <rank>species</rank>
</taxonomy>
</clade>
</clade>
- <clade>
- <name>PHANO</name>
- <taxonomy>
- <id provider="uniprot">13684</id>
- <code>PHANO</code>
- <scientific_name>Phaeosphaeria nodorum</scientific_name>
- <common_name>Glume blotch fungus</common_name>
- <synonym>Septoria nodorum</synonym>
- <rank>species</rank>
- </taxonomy>
- </clade>
</clade>
- </clade>
- <clade>
- <name>Sordariomycetes & Leotiomycetes</name>
<clade>
- <taxonomy>
- <id provider="uniprot">147550</id>
- <scientific_name>Sordariomycetes</scientific_name>
- <rank>class</rank>
- </taxonomy>
+ <name>Sordariomyceta & Lecanoromycetes</name>
<clade>
- <name>Magnaporthales & Hypocreales</name>
+ <taxonomy>
+ <id provider="uniprot">715989</id>
+ <scientific_name>Sordariomyceta</scientific_name>
+ </taxonomy>
<clade>
<taxonomy>
- <id provider="uniprot">5125</id>
- <scientific_name>Hypocreales</scientific_name>
- <rank>order</rank>
+ <id provider="uniprot">147550</id>
+ <scientific_name>Sordariomycetes</scientific_name>
+ <rank>class</rank>
</taxonomy>
<clade>
- <name>TRIVE</name>
- <taxonomy>
- <id provider="uniprot">29875</id>
- <code>TRIVE</code>
- <scientific_name>Trichoderma virens</scientific_name>
- <common_name>Gliocladium virens</common_name>
- <synonym>Trichoderma virens</synonym>
- <rank>species</rank>
- </taxonomy>
- </clade>
- <clade>
- <name>GIBZE</name>
- <taxonomy>
- <id provider="uniprot">5518</id>
- <code>GIBZE</code>
- <scientific_name>Gibberella zeae</scientific_name>
- <common_name>Wheat head blight fungus</common_name>
- <synonym>Fusarium graminearum</synonym>
- <rank>species</rank>
- </taxonomy>
+ <name>Magnaporthales & Hypocreales</name>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5125</id>
+ <scientific_name>Hypocreales</scientific_name>
+ <rank>order</rank>
+ </taxonomy>
+ <clade>
+ <name>TRIVE</name>
+ <taxonomy>
+ <id provider="uniprot">29875</id>
+ <code>TRIVE</code>
+ <scientific_name>Trichoderma virens</scientific_name>
+ <common_name>Gliocladium virens</common_name>
+ <synonym>Trichoderma virens</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>GIBZE</name>
+ <taxonomy>
+ <id provider="uniprot">5518</id>
+ <code>GIBZE</code>
+ <scientific_name>Gibberella zeae</scientific_name>
+ <common_name>Wheat head blight fungus</common_name>
+ <synonym>Fusarium graminearum</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>ACRALC</name>
+ <taxonomy>
+ <id provider="uniprot">398408</id>
+ <scientific_name>Acremonium alcalophilum</scientific_name>
+ <rank>species</rank>
+ <uri>http://genome.jgi-psf.org/public/Acral1_c3a/Acral1.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>MAGGR</name>
+ <taxonomy>
+ <id provider="uniprot">148305</id>
+ <code>MAGGR</code>
+ <scientific_name>Magnaporthe grisea</scientific_name>
+ <common_name>Rice blast fungus</common_name>
+ <synonym>Pyricularia grisea</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
</clade>
<clade>
- <name>ACRALC</name>
<taxonomy>
- <id provider="uniprot">398408</id>
- <scientific_name>Acremonium alcalophilum</scientific_name>
- <rank>species</rank>
- <uri>http://genome.jgi-psf.org/public/Acral1_c3a/Acral1.jpg</uri>
+ <id provider="uniprot">5139</id>
+ <scientific_name>Sordariales</scientific_name>
+ <rank>order</rank>
</taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">35718</id>
+ <scientific_name>Chaetomiaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">35719</id>
+ <scientific_name>Thielavia</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>THITER</name>
+ <taxonomy>
+ <id provider="eol">193532</id>
+ <scientific_name>Thielavia terrestris</scientific_name>
+ <authority>Malloch & Cain 1972</authority>
+ <synonym>Acremonium alabamense</synonym>
+ <rank>species</rank>
+ <uri>http://genome.jgi-psf.org/public/Thite2/Thite1.jpg</uri>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>MYCTHE</name>
+ <taxonomy>
+ <id provider="uniprot">573728</id>
+ <scientific_name>Myceliophthora thermophila</scientific_name>
+ <authority>(Apinis) Oorschot 1977</authority>
+ <synonym>Sporotrichum thermophilum</synonym>
+ <synonym>anamorph of Thielavia heterothallica</synonym>
+ <rank>species</rank>
+ <uri>http://genome.jgi-psf.org/public/Spoth2/Spoth0.jpg</uri>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>CHAGB</name>
+ <taxonomy>
+ <id provider="eol">1029505</id>
+ <code>CHAGB</code>
+ <scientific_name>Chaetomium globosum</scientific_name>
+ <authority>Kunze 1817</authority>
+ <common_name>Soil fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <name>NEUCR</name>
+ <taxonomy>
+ <id provider="uniprot">5141</id>
+ <code>NEUCR</code>
+ <scientific_name>Neurospora crassa</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
</clade>
</clade>
<clade>
- <name>MAGGR</name>
- <taxonomy>
- <id provider="uniprot">148305</id>
- <code>MAGGR</code>
- <scientific_name>Magnaporthe grisea</scientific_name>
- <common_name>Rice blast fungus</common_name>
- <synonym>Pyricularia grisea</synonym>
- <rank>species</rank>
- </taxonomy>
- </clade>
- </clade>
- <clade>
- <taxonomy>
- <id provider="uniprot">5139</id>
- <scientific_name>Sordariales</scientific_name>
- <rank>order</rank>
- </taxonomy>
- <clade>
<taxonomy>
- <id provider="uniprot">35718</id>
- <scientific_name>Chaetomiaceae</scientific_name>
- <rank>family</rank>
+ <id provider="uniprot">147548</id>
+ <scientific_name>Leotiomycetes</scientific_name>
+ <rank>class</rank>
</taxonomy>
<clade>
<taxonomy>
- <id provider="uniprot">35719</id>
- <scientific_name>Thielavia</scientific_name>
- <rank>genus</rank>
+ <id provider="uniprot">28983</id>
+ <scientific_name>Sclerotiniaceae</scientific_name>
+ <rank>family</rank>
</taxonomy>
<clade>
- <name>THITER</name>
<taxonomy>
- <id provider="eol">193532</id>
- <scientific_name>Thielavia terrestris</scientific_name>
- <authority>Malloch & Cain 1972</authority>
- <synonym>Acremonium alabamense</synonym>
+ <id provider="uniprot">40559</id>
+ <code>BOTFU</code>
+ <scientific_name>Botryotinia fuckeliana</scientific_name>
+ <common_name>Noble rot fungus</common_name>
+ <synonym>Botrytis cinerea</synonym>
<rank>species</rank>
- <uri>http://genome.jgi-psf.org/public/Thite2/Thite1.jpg</uri>
</taxonomy>
</clade>
<clade>
- <name>MYCTHE</name>
<taxonomy>
- <id provider="uniprot">573728</id>
- <scientific_name>Myceliophthora thermophila</scientific_name>
- <authority>(Apinis) Oorschot 1977</authority>
- <synonym>Sporotrichum thermophilum</synonym>
- <synonym>anamorph of Thielavia heterothallica</synonym>
+ <id provider="uniprot">5180</id>
+ <code>SCLSC</code>
+ <scientific_name>Sclerotinia sclerotiorum</scientific_name>
+ <common_name>White mold</common_name>
+ <synonym>Whetzelinia sclerotiorum</synonym>
<rank>species</rank>
- <uri>http://genome.jgi-psf.org/public/Spoth2/Spoth0.jpg</uri>
</taxonomy>
</clade>
</clade>
<clade>
- <name>CHAGB</name>
+ <name>OIDMAI</name>
<taxonomy>
- <id provider="eol">1029505</id>
- <code>CHAGB</code>
- <scientific_name>Chaetomium globosum</scientific_name>
- <authority>Kunze 1817</authority>
- <common_name>Soil fungus</common_name>
+ <id provider="uniprot">78148</id>
+ <scientific_name>Oidiodendron maius</scientific_name>
<rank>species</rank>
</taxonomy>
</clade>
</clade>
- <clade>
- <name>NEUCR</name>
- <taxonomy>
- <id provider="uniprot">5141</id>
- <code>NEUCR</code>
- <scientific_name>Neurospora crassa</scientific_name>
- <rank>species</rank>
- </taxonomy>
- </clade>
</clade>
- </clade>
- <clade>
- <taxonomy>
- <id provider="uniprot">147548</id>
- <scientific_name>Leotiomycetes</scientific_name>
- <rank>class</rank>
- </taxonomy>
<clade>
<taxonomy>
- <id provider="uniprot">28983</id>
- <scientific_name>Sclerotiniaceae</scientific_name>
- <rank>family</rank>
+ <id provider="uniprot">388435</id>
+ <scientific_name>Lecanoromycetidae</scientific_name>
+ <rank>subclass</rank>
</taxonomy>
<clade>
<taxonomy>
- <id provider="uniprot">40559</id>
- <code>BOTFU</code>
- <scientific_name>Botryotinia fuckeliana</scientific_name>
- <common_name>Noble rot fungus</common_name>
- <synonym>Botrytis cinerea</synonym>
+ <id provider="uniprot">27339</id>
+ <code>CLAGRA</code>
+ <scientific_name>Cladonia grayi</scientific_name>
+ <synonym>Cladonia grayi Merr</synonym>
<rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/b/b6/Cladonia_grayi-11.jpg</uri>
</taxonomy>
</clade>
<clade>
<taxonomy>
- <id provider="uniprot">5180</id>
- <code>SCLSC</code>
- <scientific_name>Sclerotinia sclerotiorum</scientific_name>
- <common_name>White mold</common_name>
- <synonym>Whetzelinia sclerotiorum</synonym>
+ <id provider="uniprot">107463</id>
+ <code>XANPAR</code>
+ <scientific_name>Xanthoria parietina</scientific_name>
<rank>species</rank>
+ <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/7/70/Xanthoria_parietina_%2806_03_31%29.jpg/800px-Xanthoria_parietina_%2806_03_31%29.jpg</uri>
</taxonomy>
</clade>
</clade>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">28568</id>
+ <scientific_name>Trichocomaceae</scientific_name>
+ <rank>family</rank>
+ </taxonomy>
+ <clade>
+ <name>Neosartorya_Emericella</name>
+ <clade>
+ <name>NEOFI</name>
+ <taxonomy>
+ <id provider="uniprot">331117</id>
+ <code>NEOFI</code>
+ <scientific_name>Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)</scientific_name>
+ <synonym>Aspergillus fischerianus</synonym>
+ </taxonomy>
+ </clade>
<clade>
- <name>OIDMAI</name>
+ <name>EMENI</name>
<taxonomy>
- <id provider="uniprot">78148</id>
- <scientific_name>Oidiodendron maius</scientific_name>
+ <id provider="eol">195546</id>
+ <code>EMENI</code>
+ <scientific_name>Emericella nidulans</scientific_name>
+ <authority>Vuill. 1927</authority>
+ <synonym>Aspergillus nidulans</synonym>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ </clade>
+ <clade>
+ <taxonomy>
+ <id provider="uniprot">5052</id>
+ <scientific_name>Aspergillus</scientific_name>
+ <rank>genus</rank>
+ </taxonomy>
+ <clade>
+ <name>ASPFL</name>
+ <taxonomy>
+ <id provider="uniprot">5059</id>
+ <code>ASPFL</code>
+ <scientific_name>Aspergillus flavus</scientific_name>
+ <rank>species</rank>
+ </taxonomy>
+ </clade>
+ <clade>
+ <name>ASPNG</name>
+ <taxonomy>
+ <id provider="uniprot">5061</id>
+ <code>ASPNG</code>
+ <scientific_name>Aspergillus niger</scientific_name>
<rank>species</rank>
</taxonomy>
</clade>
</clade>
<clade>
<taxonomy>
- <id provider="uniprot">28568</id>
- <scientific_name>Trichocomaceae</scientific_name>
- <rank>family</rank>
+ <id provider="uniprot">33183</id>
+ <scientific_name>Onygenales</scientific_name>
+ <rank>order</rank>
</taxonomy>
<clade>
- <name>Neosartorya_Emericella</name>
- <clade>
- <name>NEOFI</name>
- <taxonomy>
- <id provider="uniprot">331117</id>
- <code>NEOFI</code>
- <scientific_name>Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)</scientific_name>
- <synonym>Aspergillus fischerianus</synonym>
- </taxonomy>
- </clade>
- <clade>
- <name>EMENI</name>
- <taxonomy>
- <id provider="eol">195546</id>
- <code>EMENI</code>
- <scientific_name>Emericella nidulans</scientific_name>
- <authority>Vuill. 1927</authority>
- <synonym>Aspergillus nidulans</synonym>
- <rank>species</rank>
- </taxonomy>
- </clade>
+ <name>COCIM</name>
+ <taxonomy>
+ <id provider="uniprot">5501</id>
+ <code>COCIM</code>
+ <scientific_name>Coccidioides immitis</scientific_name>
+ <common_name>Valley fever fungus</common_name>
+ <rank>species</rank>
+ </taxonomy>
</clade>
<clade>
+ <name>UNCRE</name>
<taxonomy>
- <id provider="uniprot">5052</id>
- <scientific_name>Aspergillus</scientific_name>
- <rank>genus</rank>
+ <id provider="uniprot">336963</id>
+ <code>UNCRE</code>
+ <scientific_name>Uncinocarpus reesii (strain UAMH 1704)</scientific_name>
</taxonomy>
- <clade>
- <name>ASPFL</name>
- <taxonomy>
- <id provider="uniprot">5059</id>
- <code>ASPFL</code>
- <scientific_name>Aspergillus flavus</scientific_name>
- <rank>species</rank>
- </taxonomy>
- </clade>
- <clade>
- <name>ASPNG</name>
- <taxonomy>
- <id provider="uniprot">5061</id>
- <code>ASPNG</code>
- <scientific_name>Aspergillus niger</scientific_name>
- <rank>species</rank>
- </taxonomy>
- </clade>
</clade>
</clade>
</clade>
<clade>
<taxonomy>
- <id provider="uniprot">33183</id>
- <scientific_name>Onygenales</scientific_name>
- <rank>order</rank>
+ <id provider="uniprot">656061</id>
+ <code>TUBMM</code>
+ <scientific_name>Tuber melanosporum (strain Mel28)</scientific_name>
+ <common_name>Perigord black truffle</common_name>
+ <synonym>Tuber melanosporum Mel28</synonym>
+ <uri>http://www.gmvmonza.org/images%20parco/Tuber%20melanosporum%20p106.jpg</uri>
</taxonomy>
- <clade>
- <name>COCIM</name>
- <taxonomy>
- <id provider="uniprot">5501</id>
- <code>COCIM</code>
- <scientific_name>Coccidioides immitis</scientific_name>
- <common_name>Valley fever fungus</common_name>
- <rank>species</rank>
- </taxonomy>
- </clade>
- <clade>
- <name>UNCRE</name>
- <taxonomy>
- <id provider="uniprot">336963</id>
- <code>UNCRE</code>
- <scientific_name>Uncinocarpus reesii (strain UAMH 1704)</scientific_name>
- </taxonomy>
- </clade>
</clade>
</clade>
<clade>
git://source.jalview.org / jalview.git / commitdiff