id 'eclipse'
id 'com.github.johnrengelman.shadow' version '4.0.3'
id 'com.install4j.gradle' version '7.0.9'
+ id 'com.dorongold.task-tree' version '1.4' // only needed to display task dependency tree with gradle task1 [task2 ...] taskTree
}
repositories {
compile 'org.apache.commons:commons-compress:1.18'
}
-mainClassName = launcherClass
-def cloverInstrDir = file("${buildDir}/${cloverSourcesInstrDir}")
-def classes = "${jalviewDir}/${classesDir}"
-if (clover.equals("true")) {
- use_clover = true
- classes = "${buildDir}/${cloverClassesDir}"
-} else {
- use_clover = false
- classes = "${jalviewDir}/${classesDir}"
+// in ext the values are cast to Object. Ensure string values are cast as String (and not GStringImpl) for later use
+def string(Object o) {
+ return o.toString()
}
-// configure classpath/args for j8/j11 compilation
-
-def jalviewDirAbsolutePath = file(jalviewDir).getAbsolutePath()
-def libDir
-def libDistDir
-def compile_source_compatibility
-def compile_target_compatibility
ext {
+ jalviewDirAbsolutePath = file(jalviewDir).getAbsolutePath()
+
// local build environment properties
def localProps = "${jalviewDirAbsolutePath}/local.properties"
if (file(localProps).exists()) {
}
}
- getdownWebsiteDir = "${jalviewDir}/${getdown_website_dir}/${JAVA_VERSION}"
- getdownDir = ""
+
+ // this property set when running Eclipse headlessly
+ j2sHeadlessBuildProperty = string("net.sf.j2s.core.headlessbuild")
+ // this property set by Eclipse
+ eclipseApplicationProperty = string("eclipse.application")
+ // CHECK IF IN ECLIPSE
+ IN_ECLIPSE = System.properties[eclipseApplicationProperty].startsWith("org.eclipse.ui.")
+ if (System.properties[j2sHeadlessBuildProperty].equals("true")) { // headless build property has been set
+ println("Setting IN_ECLIPSE to ${IN_ECLIPSE} as System.properties['${j2sHeadlessBuildProperty}'] == '${System.properties[j2sHeadlessBuildProperty]}'")
+ IN_ECLIPSE = false
+ }
+ /*
+ System.properties.sort { it.key }.each {
+ key, val -> println("SYSTEM PROPERTY ${key}='${val}'")
+ }
+ */
+
+ mainClassName = string(launcherClass)
+
+ cloverInstrDir = file("${buildDir}/${cloverSourcesInstrDir}")
+ classes = string("${jalviewDir}/${classesDir}")
+ if (clover.equals("true")) {
+ use_clover = true
+ classes = string("${buildDir}/${cloverClassesDir}")
+ } else {
+ use_clover = false
+ classes = string("${jalviewDir}/${classesDir}")
+ }
+
+ getdownWebsiteDir = string("${jalviewDir}/${getdown_website_dir}/${JAVA_VERSION}")
+ getdownDir = string("")
reportRsyncCmd = false
buildDist = true
buildProperties = build_properties_file
- getdownLauncher = "${jalviewDir}/${getdown_lib_dir}/${getdown_launcher}"
+ getdownLauncher = string("${jalviewDir}/${getdown_lib_dir}/${getdown_launcher}")
switch (CHANNEL) {
case "BUILD":
// TODO: get bamboo build artifact URL for getdown artifacts
getdown_channel_base = bamboo_channelbase
- getdown_channel_name = "${bamboo_planKey}/${JAVA_VERSION}"
- getdown_app_base = "${bamboo_channelbase}/${bamboo_planKey}${bamboo_getdown_channel_suffix}/${JAVA_VERSION}"
+ getdown_channel_name = string("${bamboo_planKey}/${JAVA_VERSION}")
+ getdown_app_base = string("${bamboo_channelbase}/${bamboo_planKey}${bamboo_getdown_channel_suffix}/${JAVA_VERSION}")
getdown_app_dir = getdown_app_dir_alt
- buildProperties = "${jalviewDir}/${classesDir}/${build_properties_file}"
+ buildProperties = string("${jalviewDir}/${classesDir}/${build_properties_file}")
break
case "RELEASE":
getdown_channel_name = CHANNEL.toLowerCase()
- getdownDir = "${getdown_channel_name}/${JAVA_VERSION}"
- getdown_app_base = "${getdown_channel_base}/${getdownDir}"
+ getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
+ getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
getdown_app_dir = getdown_app_dir_release
- buildProperties = "${jalviewDir}/${classesDir}/${build_properties_file}"
+ buildProperties = string("${jalviewDir}/${classesDir}/${build_properties_file}")
reportRsyncCommand = true
break
case "ARCHIVE":
getdown_channel_name = CHANNEL.toLowerCase()+"/${JALVIEW_VERSION}"
- getdownDir = "${getdown_channel_name}/${JAVA_VERSION}"
- getdown_app_base = "${getdown_channel_base}/${getdownDir}"
+ getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
+ getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
getdown_app_dir = getdown_app_dir_alt
if (!file("${ARCHIVEDIR}/${packageDir}").exists()) {
print "Must provide an ARCHIVEDIR value to produce an archive distribution"
exit
} else {
- packageDir = "${ARCHIVEDIR}/${packageDir}"
- buildProperties = "${ARCHIVEDIR}/${classesDir}/${build_properties_file}"
+ packageDir = string("${ARCHIVEDIR}/${packageDir}")
+ buildProperties = string("${ARCHIVEDIR}/${classesDir}/${build_properties_file}")
buildDist = false
}
reportRsyncCommand = true
break
case "ARCHIVELOCAL":
- getdown_channel_name = "archive/${JALVIEW_VERSION}"
- getdownDir = "${getdown_channel_name}/${JAVA_VERSION}"
+ getdown_channel_name = string("archive/${JALVIEW_VERSION}")
+ getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
getdown_app_base = file(getdownWebsiteDir).toURI().toString()
getdown_app_dir = getdown_app_dir_alt
if (!file("${ARCHIVEDIR}/${packageDir}").exists()) {
print "Must provide an ARCHIVEDIR value to produce an archive distribution"
exit
} else {
- packageDir = "${ARCHIVEDIR}/${packageDir}"
- buildProperties = "${ARCHIVEDIR}/${classesDir}/${build_properties_file}"
+ packageDir = string("${ARCHIVEDIR}/${packageDir}")
+ buildProperties = string("${ARCHIVEDIR}/${classesDir}/${build_properties_file}")
buildDist = false
}
reportRsyncCommand = true
- getdownLauncher = "${jalviewDir}/${getdown_lib_dir}/${getdown_launcher_local}"
+ getdownLauncher = string("${jalviewDir}/${getdown_lib_dir}/${getdown_launcher_local}")
break
case "DEVELOP":
getdown_channel_name = CHANNEL.toLowerCase()
- getdownDir = "${getdown_channel_name}/${JAVA_VERSION}"
- getdown_app_base = "${getdown_channel_base}/${getdownDir}"
+ getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
+ getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
getdown_app_dir = getdown_app_dir_alt
- buildProperties = "${jalviewDir}/${classesDir}/${build_properties_file}"
+ buildProperties = string("${jalviewDir}/${classesDir}/${build_properties_file}")
reportRsyncCommand = true
break
case "TEST-RELEASE":
getdown_channel_name = CHANNEL.toLowerCase()
- getdownDir = "${getdown_channel_name}/${JAVA_VERSION}"
- getdown_app_base = "${getdown_channel_base}/${getdownDir}"
+ getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
+ getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
getdown_app_dir = getdown_app_dir_alt
- buildProperties = "${jalviewDir}/${classesDir}/${build_properties_file}"
+ buildProperties = string("${jalviewDir}/${classesDir}/${build_properties_file}")
reportRsyncCommand = true
break
case ~/^SCRATCH(|-[-\w]*)$/:
getdown_channel_name = CHANNEL
- getdownDir = "${getdown_channel_name}/${JAVA_VERSION}"
- getdown_app_base = "${getdown_channel_base}/${getdownDir}"
+ getdownDir = string("${getdown_channel_name}/${JAVA_VERSION}")
+ getdown_app_base = string("${getdown_channel_base}/${getdownDir}")
getdown_app_dir = getdown_app_dir_alt
- buildProperties = "${jalviewDir}/${classesDir}/${build_properties_file}"
+ buildProperties = string("${jalviewDir}/${classesDir}/${build_properties_file}")
reportRsyncCommand = true
break
case "LOCAL":
getdown_app_base = file(getdownWebsiteDir).toURI().toString()
getdown_app_dir = getdown_app_dir_alt
- buildProperties = "${jalviewDir}/${classesDir}/${build_properties_file}"
- getdownLauncher = "${jalviewDir}/${getdown_lib_dir}/${getdown_launcher_local}"
+ buildProperties = string("${jalviewDir}/${classesDir}/${build_properties_file}")
+ getdownLauncher = string("${jalviewDir}/${getdown_lib_dir}/${getdown_launcher_local}")
break
default: // something wrong specified
}
- getdownAppDir = "${getdownWebsiteDir}/${getdown_app_dir}"
+ getdownAppDir = string("${getdownWebsiteDir}/${getdown_app_dir}")
//getdownJ11libDir = "${getdownWebsiteDir}/${getdown_j11lib_dir}"
- getdownResourceDir = "${getdownWebsiteDir}/${getdown_resource_dir}"
- getdownInstallDir = "${getdownWebsiteDir}/${getdown_install_dir}"
- getdownFilesDir = "${jalviewDir}/${getdown_files_dir}/${JAVA_VERSION}/"
- getdownFilesInstallDir = "${getdownFilesDir}/${getdown_install_dir}"
+ getdownResourceDir = string("${getdownWebsiteDir}/${getdown_resource_dir}")
+ getdownInstallDir = string("${getdownWebsiteDir}/${getdown_install_dir}")
+ getdownFilesDir = string("${jalviewDir}/${getdown_files_dir}/${JAVA_VERSION}/")
+ getdownFilesInstallDir = string("${getdownFilesDir}/${getdown_install_dir}")
/* compile without modules -- using classpath libraries
modules_compileClasspath = fileTree(dir: "${jalviewDir}/${j11modDir}", include: ["*.jar"])
modules_runtimeClasspath = modules_compileClasspath
*/
- gitHash = ""
- gitBranch = ""
+ gitHash = string("")
+ gitBranch = string("")
println("Using a ${CHANNEL} profile.")
-}
-def JAVA_INTEGER_VERSION
-def additional_compiler_args = []
-// these are getdown.txt properties defined dependent on the JAVA_VERSION
-def getdown_alt_java_min_version
-def getdown_alt_java_max_version
-// this property is assigned below and expanded to multiple lines in the getdown task
-def getdown_alt_multi_java_location
-// this property is for the Java library used in eclipse
-def eclipse_java_runtime_name
-if (JAVA_VERSION.equals("1.8")) {
- JAVA_INTEGER_VERSION = "8"
- //libDir = j8libDir
- libDir = j11libDir
- libDistDir = j8libDir
- compile_source_compatibility = 1.8
- compile_target_compatibility = 1.8
- getdown_alt_java_min_version = getdown_alt_java8_min_version
- getdown_alt_java_max_version = getdown_alt_java8_max_version
- getdown_alt_multi_java_location = getdown_alt_java8_txt_multi_java_location
- eclipse_java_runtime_name = "JavaSE-1.8"
-} else if (JAVA_VERSION.equals("11")) {
- JAVA_INTEGER_VERSION = "11"
- libDir = j11libDir
- libDistDir = j11libDir
- compile_source_compatibility = 11
- compile_target_compatibility = 11
- getdown_alt_java_min_version = getdown_alt_java11_min_version
- getdown_alt_java_max_version = getdown_alt_java11_max_version
- getdown_alt_multi_java_location = getdown_alt_java11_txt_multi_java_location
- eclipse_java_runtime_name = "JavaSE-11"
- /* compile without modules -- using classpath libraries
- additional_compiler_args += [
- '--module-path', ext.modules_compileClasspath.asPath,
- '--add-modules', j11modules
- ]
- */
-} else if (JAVA_VERSION.equals("12") || JAVA_VERSION.equals("13")) {
- JAVA_INTEGER_VERSION = JAVA_VERSION
- libDir = j11libDir
- libDistDir = j11libDir
- compile_source_compatibility = JAVA_VERSION
- compile_target_compatibility = JAVA_VERSION
- getdown_alt_java_min_version = getdown_alt_java11_min_version
- getdown_alt_java_max_version = getdown_alt_java11_max_version
- getdown_alt_multi_java_location = getdown_alt_java11_txt_multi_java_location
- eclipse_java_runtime_name = "JavaSE-11"
- /* compile without modules -- using classpath libraries
- additional_compiler_args += [
- '--module-path', ext.modules_compileClasspath.asPath,
- '--add-modules', j11modules
- ]
- */
-} else {
- throw new GradleException("JAVA_VERSION=${JAVA_VERSION} not currently supported by Jalview")
+ additional_compiler_args = []
+ // configure classpath/args for j8/j11 compilation
+ if (JAVA_VERSION.equals("1.8")) {
+ JAVA_INTEGER_VERSION = string("8")
+ //libDir = j8libDir
+ libDir = j11libDir
+ libDistDir = j8libDir
+ compile_source_compatibility = 1.8
+ compile_target_compatibility = 1.8
+ // these are getdown.txt properties defined dependent on the JAVA_VERSION
+ getdown_alt_java_min_version = getdown_alt_java8_min_version
+ getdown_alt_java_max_version = getdown_alt_java8_max_version
+ // this property is assigned below and expanded to multiple lines in the getdown task
+ getdown_alt_multi_java_location = getdown_alt_java8_txt_multi_java_location
+ // this property is for the Java library used in eclipse
+ eclipse_java_runtime_name = string("JavaSE-1.8")
+ } else if (JAVA_VERSION.equals("11")) {
+ JAVA_INTEGER_VERSION = string("11")
+ libDir = j11libDir
+ libDistDir = j11libDir
+ compile_source_compatibility = 11
+ compile_target_compatibility = 11
+ getdown_alt_java_min_version = getdown_alt_java11_min_version
+ getdown_alt_java_max_version = getdown_alt_java11_max_version
+ getdown_alt_multi_java_location = getdown_alt_java11_txt_multi_java_location
+ eclipse_java_runtime_name = string("JavaSE-11")
+ /* compile without modules -- using classpath libraries
+ additional_compiler_args += [
+ '--module-path', modules_compileClasspath.asPath,
+ '--add-modules', j11modules
+ ]
+ */
+ } else if (JAVA_VERSION.equals("12") || JAVA_VERSION.equals("13")) {
+ JAVA_INTEGER_VERSION = JAVA_VERSION
+ libDir = j11libDir
+ libDistDir = j11libDir
+ compile_source_compatibility = JAVA_VERSION
+ compile_target_compatibility = JAVA_VERSION
+ getdown_alt_java_min_version = getdown_alt_java11_min_version
+ getdown_alt_java_max_version = getdown_alt_java11_max_version
+ getdown_alt_multi_java_location = getdown_alt_java11_txt_multi_java_location
+ eclipse_java_runtime_name = string("JavaSE-11")
+ /* compile without modules -- using classpath libraries
+ additional_compiler_args += [
+ '--module-path', modules_compileClasspath.asPath,
+ '--add-modules', j11modules
+ ]
+ */
+ } else {
+ throw new GradleException("JAVA_VERSION=${JAVA_VERSION} not currently supported by Jalview")
+ }
+
+
+ // for install4j
+ macosJavaVMDir = string("${System.env.HOME}/buildtools/jre/openjdk-java_vm/getdown/macos-jre${JAVA_VERSION}/jre")
+ macosJavaVMTgz = string("${System.env.HOME}/buildtools/jre/openjdk-java_vm/install4j/tgz/macos-jre${JAVA_VERSION}.tar.gz")
+ windowsJavaVMDir = string("${System.env.HOME}/buildtools/jre/openjdk-java_vm/getdown/windows-jre${JAVA_VERSION}/jre")
+ windowsJavaVMTgz = string("${System.env.HOME}/buildtools/jre/openjdk-java_vm/install4j/tgz/windows-jre${JAVA_VERSION}.tar.gz")
+ install4jDir = string("${jalviewDir}/${install4jResourceDir}")
+ install4jConfFileName = string("jalview-installers-java${JAVA_VERSION}.install4j")
+ install4jConfFile = string("${install4jDir}/${install4jConfFileName}")
+
+
+ buildingHTML = string("${jalviewDir}/${docDir}/building.html")
+ helpFile = string("${classes}/${helpDir}/help.jhm")
+
+
+ relativeBuildDir = file(jalviewDirAbsolutePath).toPath().relativize(buildDir.toPath())
+ jalviewjsBuildDir = string("${relativeBuildDir}/jalviewjs")
+ jalviewjsSiteDir = string("${jalviewjsBuildDir}/${jalviewjs_site_dir}")
+ jalviewjsTransferSiteJsDir = string("${jalviewjsBuildDir}/tmp/${jalviewjs_site_dir}_js")
+ jalviewjsTransferSiteLibDir = string("${jalviewjsBuildDir}/tmp/${jalviewjs_site_dir}_lib")
+ jalviewjsTransferSiteSwingJsDir = string("${jalviewjsBuildDir}/tmp/${jalviewjs_site_dir}_swingjs")
+ jalviewjsTransferSiteCoreDir = string("${jalviewjsBuildDir}/tmp/${jalviewjs_site_dir}_core")
+ jalviewjsJalviewCoreName = jalviewjs_core_name
+ jalviewjsJalviewTemplateName = string(jalviewjs_name)
+
+ eclipseWorkspace = null
+ eclipseBinary = string("")
+ eclipseVersion = string("")
+ eclipseDebug = false
+ // ENDEXT
}
sourceSets {
-
main {
java {
srcDirs "${jalviewDir}/${sourceDir}"
- outputDir = file("${classes}")
+ outputDir = file(project.classes)
}
resources {
cloverRuntime.extendsFrom cloverCompile
}
-
eclipse {
project {
name = eclipse_project_name
}
} // jdt
-
+
synchronizationTasks "eclipseSynchronizationTask"
autoBuildTasks "eclipseAutoBuildTask"
-
}
ignoreExitValue true
}
- project.ext.gitHash = hashStdOut.toString().trim()
- project.ext.gitBranch = branchStdOut.toString().trim()
+ gitHash = hashStdOut.toString().trim()
+ gitBranch = branchStdOut.toString().trim()
outputs.upToDateWhen { false }
}
//comment "--Jalview Build Details--\n"+getDate("yyyy-MM-dd")
property "BUILD_DATE", getDate("HH:mm:ss dd MMMM yyyy")
property "VERSION", JALVIEW_VERSION
- property "INSTALLATION", INSTALLATION+" git-commit:"+project.ext.gitHash+" ["+project.ext.gitBranch+"]"
+ property "INSTALLATION", INSTALLATION+" git-commit:"+gitHash+" ["+gitBranch+"]"
outputs.file(outputFile)
}
-def buildingHTML = "${jalviewDir}/${docDir}/building.html"
task cleanBuildingHTML(type: Delete) {
doFirst {
delete buildingHTML
}
-def helpFile = "${classes}/${helpDir}/help.jhm"
task copyHelp(type: Copy) {
def inputDir = "${jalviewDir}/${helpParentDir}/${helpDir}"
def outputDir = "${classes}/${helpDir}"
exclude '**/*.gif'
exclude '**/*.jpg'
exclude '**/*.png'
- filter(ReplaceTokens, beginToken: '$$', endToken: '$$', tokens: ['Version-Rel': JALVIEW_VERSION,'Year-Rel': getDate("yyyy")])
+ filter(ReplaceTokens,
+ beginToken: '$$',
+ endToken: '$$',
+ tokens: [
+ 'Version-Rel': JALVIEW_VERSION,
+ 'Year-Rel': getDate("yyyy")
+ ]
+ )
}
from(inputDir) {
include '**/*.gif'
def getdownWebsiteResourceFilenames = []
def getdownTextString = ""
- def getdownResourceDir = project.ext.getdownResourceDir
- def getdownAppDir = project.ext.getdownAppDir
+ def getdownResourceDir = getdownResourceDir
+ def getdownAppDir = getdownAppDir
def getdownResourceFilenames = []
doFirst {
// clean the getdown website and files dir before creating getdown folders
- delete project.ext.getdownWebsiteDir
- delete project.ext.getdownFilesDir
+ delete getdownWebsiteDir
+ delete getdownFilesDir
copy {
from buildProperties
rename(build_properties_file, getdown_build_properties)
- into project.ext.getdownAppDir
+ into getdownAppDir
}
getdownWebsiteResourceFilenames += "${getdown_app_dir}/${getdown_build_properties}"
getdownResourceFilenames.each{ filename ->
copy {
from filename
- into project.ext.getdownResourceDir
+ into getdownResourceDir
}
}
getdownTextString += line
copy {
from f.getPath()
- into project.ext.getdownAppDir
+ into getdownAppDir
}
}
getdownTextString += line
copy {
from f.getPath()
- into project.ext.getdownJ11libDir
+ into getdownJ11libDir
}
}
}
getdownTextString += "resource = ${getdown_launcher_new}\n"
getdownTextString += "class = ${mainClass}\n"
- def getdown_txt = file("${project.ext.getdownWebsiteDir}/getdown.txt")
+ def getdown_txt = file("${getdownWebsiteDir}/getdown.txt")
getdown_txt.write(getdownTextString)
- def launch_jvl = file("${project.ext.getdownWebsiteDir}/${getdown_launch_jvl}")
+ def launch_jvl = file("${getdownWebsiteDir}/${getdown_launch_jvl}")
launch_jvl.write("appbase="+props.get("getdown_txt_appbase"))
copy {
from getdownLauncher
rename(file(getdownLauncher).getName(), getdown_launcher_new)
- into project.ext.getdownWebsiteDir
+ into getdownWebsiteDir
}
copy {
if (file(getdownLauncher).getName() != getdown_launcher) {
rename(file(getdownLauncher).getName(), getdown_launcher)
}
- into project.ext.getdownWebsiteDir
+ into getdownWebsiteDir
}
if (! (CHANNEL.startsWith("ARCHIVE") || CHANNEL.startsWith("DEVELOP"))) {
copy {
from getdownResourceDir
- into "${project.ext.getdownFilesDir}/${getdown_resource_dir}"
+ into "${getdownFilesDir}/${getdown_resource_dir}"
}
}
if (buildDist) {
inputs.dir("${jalviewDir}/${packageDir}")
}
- outputs.dir(project.ext.getdownWebsiteDir)
- outputs.dir(project.ext.getdownFilesDir)
+ outputs.dir(getdownWebsiteDir)
+ outputs.dir(getdownFilesDir)
}
classpath = files("${getdownWebsiteDir}/${getdown_launcher}")
}
main = "com.threerings.getdown.tools.Digester"
- args project.ext.getdownWebsiteDir
- inputs.dir(project.ext.getdownWebsiteDir)
- outputs.file("${project.ext.getdownWebsiteDir}/digest2.txt")
+ args getdownWebsiteDir
+ inputs.dir(getdownWebsiteDir)
+ outputs.file("${getdownWebsiteDir}/digest2.txt")
}
clean {
doFirst {
- delete project.ext.getdownWebsiteDir
- delete project.ext.getdownFilesDir
+ delete getdownWebsiteDir
+ delete getdownFilesDir
}
}
}
-def install4jConf
-def macosJavaVMDir
-def macosJavaVMTgz
-def windowsJavaVMDir
-def windowsJavaVMTgz
-def install4jDir = "${jalviewDir}/${install4jResourceDir}"
-def install4jConfFile = "jalview-installers-java${JAVA_VERSION}.install4j"
-install4jConf = "${install4jDir}/${install4jConfFile}"
-
task copyInstall4jTemplate(type: Copy) {
- macosJavaVMDir = "${System.env.HOME}/buildtools/jre/openjdk-java_vm/getdown/macos-jre${JAVA_VERSION}/jre"
- macosJavaVMTgz = "${System.env.HOME}/buildtools/jre/openjdk-java_vm/install4j/tgz/macos-jre${JAVA_VERSION}.tar.gz"
- windowsJavaVMDir = "${System.env.HOME}/buildtools/jre/openjdk-java_vm/getdown/windows-jre${JAVA_VERSION}/jre"
- windowsJavaVMTgz = "${System.env.HOME}/buildtools/jre/openjdk-java_vm/install4j/tgz/windows-jre${JAVA_VERSION}.tar.gz"
from (install4jDir) {
include install4jTemplate
- rename (install4jTemplate, install4jConfFile)
- filter(ReplaceTokens, beginToken: '', endToken: '', tokens: ['9999999999': JAVA_VERSION])
- filter(ReplaceTokens, beginToken: '$$', endToken: '$$',
- tokens: [
- 'JAVA_VERSION': JAVA_VERSION,
- 'JAVA_INTEGER_VERSION': JAVA_INTEGER_VERSION,
- 'VERSION': JALVIEW_VERSION,
- 'MACOS_JAVA_VM_DIR': macosJavaVMDir,
- 'MACOS_JAVA_VM_TGZ': macosJavaVMTgz,
- 'WINDOWS_JAVA_VM_DIR': windowsJavaVMDir,
- 'WINDOWS_JAVA_VM_TGZ': windowsJavaVMTgz,
- 'INSTALL4JINFOPLISTFILEASSOCIATIONS': install4jInfoPlistFileAssociations,
- 'COPYRIGHT_MESSAGE': install4jCopyrightMessage,
- 'MACOS_BUNDLE_ID': install4jMacOSBundleId,
- 'GETDOWN_RESOURCE_DIR': getdown_resource_dir,
- 'GETDOWN_DIST_DIR': getdown_app_dir,
- 'GETDOWN_ALT_DIR': getdown_app_dir_alt,
- 'GETDOWN_INSTALL_DIR': getdown_install_dir
- ]
+ rename (install4jTemplate, install4jConfFileName)
+ filter(ReplaceTokens,
+ beginToken: '',
+ endToken: '',
+ tokens: [
+ '9999999999': JAVA_VERSION
+ ]
+ )
+ filter(ReplaceTokens,
+ beginToken: '$$',
+ endToken: '$$',
+ tokens: [
+ 'JAVA_VERSION': JAVA_VERSION,
+ 'JAVA_INTEGER_VERSION': JAVA_INTEGER_VERSION,
+ 'VERSION': JALVIEW_VERSION,
+ 'MACOS_JAVA_VM_DIR': macosJavaVMDir,
+ 'MACOS_JAVA_VM_TGZ': macosJavaVMTgz,
+ 'WINDOWS_JAVA_VM_DIR': windowsJavaVMDir,
+ 'WINDOWS_JAVA_VM_TGZ': windowsJavaVMTgz,
+ 'INSTALL4JINFOPLISTFILEASSOCIATIONS': install4jInfoPlistFileAssociations,
+ 'COPYRIGHT_MESSAGE': install4jCopyrightMessage,
+ 'MACOS_BUNDLE_ID': install4jMacOSBundleId,
+ 'GETDOWN_RESOURCE_DIR': getdown_resource_dir,
+ 'GETDOWN_DIST_DIR': getdown_app_dir,
+ 'GETDOWN_ALT_DIR': getdown_app_dir_alt,
+ 'GETDOWN_INSTALL_DIR': getdown_install_dir
+ ]
)
- if (OSX_KEYPASS=="") {
- filter(ReplaceTokens, beginToken: 'codeSigning macEnabled="', endToken: '"', tokens: ['true':'codeSigning macEnabled="false"'])
- filter(ReplaceTokens, beginToken: 'runPostProcessor="true" ',endToken: 'Processor', tokens: ['post':'runPostProcessor="false" postProcessor'])
+ if (OSX_KEYPASS == "") {
+ filter(ReplaceTokens,
+ beginToken: 'codeSigning macEnabled="',
+ endToken: '"',
+ tokens: [
+ 'true': 'codeSigning macEnabled="false"'
+ ]
+ )
+ filter(ReplaceTokens,
+ beginToken: 'runPostProcessor="true" ',
+ endToken: 'Processor',
+ tokens: [
+ 'post': 'runPostProcessor="false" postProcessor'
+ ]
+ )
}
}
into install4jDir
- outputs.files(install4jConf)
+ outputs.files(install4jConfFile)
doLast {
// include file associations in installer
flags: "s",
match: '<action name="EXTENSIONS_REPLACED_BY_GRADLE".*?</action>',
replace: installerFileAssociationsXml,
- file: install4jConf
+ file: install4jConfFile
)
/*
// include uninstaller applescript app files in dmg
flags: "s",
match: '<file name="UNINSTALL_OLD_JALVIEW_APP_REPLACED_IN_GRADLE" file=.*?>',
replace: installerDMGUninstallerXml,
- file: install4jConf
+ file: install4jConfFile
)
*/
}
}
+clean {
+ doFirst {
+ delete install4jConfFile
+ }
+}
+
+
task installers(type: com.install4j.gradle.Install4jTask) {
group = "distribution"
description = "Create the install4j installers"
dependsOn getdown
dependsOn copyInstall4jTemplate
- projectFile = file(install4jConf)
+ projectFile = file(install4jConfFile)
variables = [majorVersion: version.substring(2, 11), build: 001, OSX_KEYSTORE: OSX_KEYSTORE, JSIGN_SH: JSIGN_SH]
destination = "${jalviewDir}/${install4jBuildDir}/${JAVA_VERSION}"
buildSelected = true
println("Using projectFile "+projectFile)
}
- inputs.dir(project.ext.getdownWebsiteDir)
- inputs.file(install4jConf)
+ inputs.dir(getdownWebsiteDir)
+ inputs.file(install4jConfFile)
inputs.dir(macosJavaVMDir)
inputs.dir(windowsJavaVMDir)
outputs.dir("${jalviewDir}/${install4jBuildDir}/${JAVA_VERSION}")
clean {
doFirst {
- delete install4jConf
+ delete install4jConfFile
}
}
from(jalviewDir) {
exclude (EXCLUDE_FILES)
include (PROCESS_FILES)
- filter(ReplaceTokens, beginToken: '$$', endToken: '$$', tokens: ['Version-Rel': JALVIEW_VERSION,'Year-Rel': getDate("yyyy")])
+ filter(ReplaceTokens,
+ beginToken: '$$',
+ endToken: '$$',
+ tokens: [
+ 'Version-Rel': JALVIEW_VERSION,
+ 'Year-Rel': getDate("yyyy")
+ ]
+ )
}
from(jalviewDir) {
exclude (EXCLUDE_FILES)
exclude (PROCESS_FILES)
- exclude ("appletlib")
- exclude ("**/*locales")
- exclude ("*locales/**")
- exclude ("utils/InstallAnywhere")
+ exclude ("appletlib")
+ exclude ("**/*locales")
+ exclude ("*locales/**")
+ exclude ("utils/InstallAnywhere")
exclude (getdown_files_dir)
- exclude (getdown_website_dir)
+ exclude (getdown_website_dir)
- // exluding these as not using jars as modules yet
- exclude ("${j11modDir}/**/*.jar")
-}
-// from (jalviewDir) {
-// // explicit includes for stuff that seemed to not get included
-// include(fileTree("test/**/*."))
-// exclude(EXCLUDE_FILES)
-// exclude(PROCESS_FILES)
-// }
+ // exluding these as not using jars as modules yet
+ exclude ("${j11modDir}/**/*.jar")
+ }
+ // from (jalviewDir) {
+ // // explicit includes for stuff that seemed to not get included
+ // include(fileTree("test/**/*."))
+ // exclude(EXCLUDE_FILES)
+ // exclude(PROCESS_FILES)
+ // }
}
}
-def jalviewjsBuildDir
-def jalviewjsSiteDir
-def jalviewjsTransferSiteJsDir
-def jalviewjsTransferSiteLibDir
-def jalviewjsTransferSiteSwingJsDir
-def jalviewjsTransferSiteCoreDir
-task jalviewjsSitePath {
- def relativeBuildDir = file(jalviewDirAbsolutePath).toPath().relativize(buildDir.toPath())
- jalviewjsBuildDir = "${relativeBuildDir}/jalviewjs"
- jalviewjsSiteDir = "${jalviewjsBuildDir}/${jalviewjs_site_dir}"
- jalviewjsTransferSiteJsDir = "${jalviewjsBuildDir}/tmp/${jalviewjs_site_dir}_js"
- jalviewjsTransferSiteLibDir = "${jalviewjsBuildDir}/tmp/${jalviewjs_site_dir}_lib"
- jalviewjsTransferSiteSwingJsDir = "${jalviewjsBuildDir}/tmp/${jalviewjs_site_dir}_swingjs"
- jalviewjsTransferSiteCoreDir = "${jalviewjsBuildDir}/tmp/${jalviewjs_site_dir}_core"
+task j2sSetHeadlessBuild {
+ doFirst {
+ IN_ECLIPSE = false
+ }
}
-def eclipseWorkspace
task jalviewjsSetEclipseWorkspace {
def propKey = "jalviewjs_eclipse_workspace"
def propVal = null
eclipseWorkspace = file(eclipseWsDir)
doFirst {
+ // do not run a headless transpile when we claim to be in Eclipse
+ if (IN_ECLIPSE) {
+ println("Skipping task ${name} as IN_ECLIPSE=${IN_ECLIPSE}")
+ throw new StopExecutionException("Not running headless transpile whilst IN_ECLIPSE is '${IN_ECLIPSE}'")
+ } else {
+ println("Running task ${name} as IN_ECLIPSE=${IN_ECLIPSE}")
+ }
+
if (writeProps) {
props.setProperty(propKey, eclipseWsDir)
propsFile.parentFile.mkdirs()
}
-def eclipseBinary
-def eclipseVersion
-def eclipseDebug = false
-def eclipseVersionSuffix = ""
task jalviewjsEclipsePaths {
def eclipseProduct
eclipseDebug = (project.hasProperty(propKey) && project.getProperty(propKey).equals("true"))
doFirst {
+ // do not run a headless transpile when we claim to be in Eclipse
+ if (IN_ECLIPSE) {
+ println("Skipping task ${name} as IN_ECLIPSE=${IN_ECLIPSE}")
+ throw new StopExecutionException("Not running headless transpile whilst IN_ECLIPSE is '${IN_ECLIPSE}'")
+ } else {
+ println("Running task ${name} as IN_ECLIPSE=${IN_ECLIPSE}")
+ }
+
if (!assumedVersion) {
println("ECLIPSE VERSION=${eclipseVersion}")
}
task jalviewjsTransferUnzipSwingJs {
- dependsOn jalviewjsSitePath
-
def file_zip = "${jalviewDir}/${jalviewjs_swingjs_zip}"
doLast {
task jalviewjsTransferUnzipLib {
- dependsOn jalviewjsSitePath
-
def zipFiles = fileTree(dir: "${jalviewDir}/${jalviewjs_libjs_dir}", include: "*.zip")
doLast {
group "JalviewJS"
description "Create the .j2s file from the j2s.* properties"
- dependsOn jalviewjsSitePath
-
outputFile ("${jalviewDir}/${jalviewjs_j2s_settings}")
def j2s_props = project.properties.findAll { it.key.startsWith("j2s.") }.sort { it.key }
def siteDirProperty = "j2s.site.directory"
task jalviewjsSyncAllLibs (type: Sync) {
- dependsOn jalviewjsSitePath
dependsOn jalviewjsTransferUnzipAllLibs
def inputFiles = fileTree(dir: "${jalviewDir}/${jalviewjsTransferSiteLibDir}")
inputFiles += fileTree(dir: "${jalviewDir}/${jalviewjsTransferSiteSwingJsDir}")
task jalviewjsSyncResources (type: Sync) {
- dependsOn jalviewjsSitePath
def inputFiles = fileTree(dir: "${jalviewDir}/${resourceDir}")
def outputDir = "${jalviewDir}/${jalviewjsSiteDir}/${jalviewjs_j2s_subdir}"
task jalviewjsSyncSiteResources (type: Sync) {
- dependsOn jalviewjsSitePath
def inputFiles = fileTree(dir: "${jalviewDir}/${jalviewjs_site_resource_dir}")
def outputDir = "${jalviewDir}/${jalviewjsSiteDir}"
task jalviewjsSyncBuildProperties (type: Sync) {
- dependsOn jalviewjsSitePath
dependsOn createBuildProperties
def inputFiles = [file(buildProperties)]
def outputDir = "${jalviewDir}/${jalviewjsSiteDir}/${jalviewjs_j2s_subdir}"
doFirst {
// do not run a headless import when we claim to be in Eclipse
- if (ECLIPSE_IDE_DEVELOPER.equals("true")) {
- throw new StopExecutionException("Not running headless import whilst ECLIPSE_IDE_DEVELOPER is '"+ECLIPSE_IDE_DEVELOPER+"'")
+ if (IN_ECLIPSE) {
+ println("Skipping task ${name} as IN_ECLIPSE=${IN_ECLIPSE}")
+ throw new StopExecutionException("Not running headless import whilst IN_ECLIPSE is '${IN_ECLIPSE}'")
+ } else {
+ println("Running task ${name} as IN_ECLIPSE=${IN_ECLIPSE}")
}
}
args += "-debug"
}
args += [ "--launcher.appendVmargs", "-vmargs", "-Dorg.eclipse.equinox.p2.reconciler.dropins.directory=${jalviewDirAbsolutePath}/${jalviewjsBuildDir}/${jalviewjs_eclipse_tmp_dropins_dir}" ]
+ if (!IN_ECLIPSE) {
+ args += [ "-D${j2sHeadlessBuildProperty}=true" ]
+ }
inputs.file("${jalviewDir}/.project")
outputs.upToDateWhen {
doFirst {
// do not run a headless transpile when we claim to be in Eclipse
- if (ECLIPSE_IDE_DEVELOPER.equals("true")) {
- throw new StopExecutionException("Not running headless transpile whilst ECLIPSE_IDE_DEVELOPER is '"+ECLIPSE_IDE_DEVELOPER+"'")
+ if (IN_ECLIPSE) {
+ println("Skipping task ${name} as IN_ECLIPSE=${IN_ECLIPSE}")
+ throw new StopExecutionException("Not running headless transpile whilst IN_ECLIPSE is '${IN_ECLIPSE}'")
+ } else {
+ println("Running task ${name} as IN_ECLIPSE=${IN_ECLIPSE}")
}
}
}
-def jalviewjsJalviewTemplateName = "JalviewJS"
-def jalviewjsJalviewCoreName = "_jalview"
task jalviewjsNoTranspileBuildAllCores {
- dependsOn jalviewjsSitePath
dependsOn jalviewjsTransferUnzipSwingJs
def j2sDir = "${jalviewDir}/${jalviewjsTransferSiteJsDir}/${jalviewjs_j2s_subdir}"
def jalviewjsJalviewCoreHtmlFile
-task jalviewjsPublishCoreTemplate(type: Sync) {
- dependsOn jalviewjsSitePath
- dependsOn jalviewjsBuildAllCores
+task jalviewjsNoTranspilePublishCoreTemplate(type: Sync) {
+ dependsOn jalviewjsNoTranspileBuildAllCores
def inputFile = file("${jalviewDir}/${j2s_template_html}")
def outputDir = "${jalviewDir}/${jalviewjsTransferSiteCoreDir}"
}
return null
}
- filter(ReplaceTokens, beginToken: '_', endToken: '_', tokens: ['MAIN': '"'+mainClass+'"', 'CODE': "null", 'NAME': jalviewjsJalviewTemplateName])
- filter(ReplaceTokens, beginToken: '', endToken: '', tokens: ['NONE': jalviewjsJalviewCoreName])
+ filter(ReplaceTokens,
+ beginToken: '_',
+ endToken: '_',
+ tokens: [
+ 'MAIN': '"'+mainClass+'"',
+ 'CODE': "null",
+ 'NAME': jalviewjsJalviewTemplateName
+ ]
+ )
+ filter(ReplaceTokens,
+ beginToken: '',
+ endToken: '',
+ tokens: [
+ 'NONE': jalviewjsJalviewCoreName
+ ]
+ )
preserve {
include "**"
}
}
+task jalviewjsPublishCoreTemplate {
+ dependsOn jalviewjsTranspile
+ dependsOn jalviewjsPublishCoreTemplate
+}
+
+
task jalviewjsNoTranspileSyncCore (type: Sync) {
- dependsOn jalviewjsSitePath
dependsOn jalviewjsNoTranspileBuildAllCores
- dependsOn jalviewjsPublishCoreTemplate
+ dependsOn jalviewjsNoTranspilePublishCoreTemplate
def inputFiles = fileTree(dir: "${jalviewDir}/${jalviewjsTransferSiteCoreDir}")
def outputDir = "${jalviewDir}/${jalviewjsSiteDir}"
group "JalviewJS"
def filename = "jalviewjsTest.html"
description "Starts a webserver on localhost to test the website. See ${filename} to access local site on most recently used port."
- dependsOn jalviewjsSitePath
def htmlFile = "${jalviewDirAbsolutePath}/${filename}"
doLast {
git://source.jalview.org / jalview.git / commitdiff