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JAL-2738 fix bug of premature exit from adding attributes
author
gmungoc
<g.m.carstairs@dundee.ac.uk>
Wed, 4 Oct 2017 14:19:02 +0000
(15:19 +0100)
committer
gmungoc
<g.m.carstairs@dundee.ac.uk>
Wed, 4 Oct 2017 14:19:02 +0000
(15:19 +0100)
src/jalview/io/vcf/VCFLoader.java
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diff --git
a/src/jalview/io/vcf/VCFLoader.java
b/src/jalview/io/vcf/VCFLoader.java
index
fd0e0d6
..
a3e7e5a
100644
(file)
--- a/
src/jalview/io/vcf/VCFLoader.java
+++ b/
src/jalview/io/vcf/VCFLoader.java
@@
-620,7
+620,7
@@
public class VCFLoader
if (CSQ.equals(key))
{
addConsequences(variant, seq, sf, altAlelleIndex);
- return;
+ continue;
}
/*