JAL-653 added missing pragma string to processing filter
authorJim Procter <jprocter@issues.jalview.org>
Tue, 10 Nov 2015 15:00:47 +0000 (15:00 +0000)
committerJim Procter <jprocter@issues.jalview.org>
Tue, 10 Nov 2015 15:00:47 +0000 (15:00 +0000)
src/jalview/io/FeaturesFile.java

index c6bc1dd..a670e6e 100755 (executable)
@@ -705,6 +705,7 @@ public class FeaturesFile extends AlignFile
   static
   {
     GFFPRAGMA = new HashMap<String, GffPragmas>();
+    GFFPRAGMA.put("gff-version", GffPragmas.gff_version);
     GFFPRAGMA.put("sequence-region", GffPragmas.sequence_region);
     GFFPRAGMA.put("feature-ontology", GffPragmas.feature_ontology);
     GFFPRAGMA.put("#", GffPragmas.hash);
@@ -1510,6 +1511,7 @@ public class FeaturesFile extends AlignFile
   /**
    * this is only for the benefit of object polymorphism - method does nothing.
    */
+  @Override
   public void parse()
   {
     // IGNORED
@@ -1520,6 +1522,7 @@ public class FeaturesFile extends AlignFile
    * 
    * @return error message
    */
+  @Override
   public String print()
   {
     return "USE printGFFFormat() or printJalviewFormat()";