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work on taxonomy extraction for applets for aLeaves MAFFT suite
authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Thu, 6 Dec 2012 01:48:05 +0000 (01:48 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Thu, 6 Dec 2012 01:48:05 +0000 (01:48 +0000)
forester/aptx/aptx_example_files/species_extraction_pfam.nh [new file with mode: 0644] patch | blob
forester/aptx/aptx_example_files/species_extraction_yes.nh [new file with mode: 0644] patch | blob

diff --git a/forester/aptx/aptx_example_files/species_extraction_pfam.nh b/forester/aptx/aptx_example_files/species_extraction_pfam.nh
new file mode 100644 (file)
index 0000000..634c440
--- /dev/null
+++ b/forester/aptx/aptx_example_files/species_extraction_pfam.nh
@@ -0,0 +1 @@
+((((FIBG_PETMA/26-172:1.695770,O93568_CHICK/29-173:0.257320):0.396670,(A8E5P0_DANRE/26-168:0.145640,Q4SRZ7_PEA/25-167:0.547700)1.000:0.792700):0.000140,(FIBG_HUMAN/29-173:0.078620,(FIBG_RAT/29-173:0.149570,FIBG_BOVIN/27-171:0.244750)0.847:0.044440)0.891:0.179090):0.045500,FIBG_PIG/27-170:0.739450);
diff --git a/forester/aptx/aptx_example_files/species_extraction_yes.nh b/forester/aptx/aptx_example_files/species_extraction_yes.nh
new file mode 100644 (file)
index 0000000..19d5623
--- /dev/null
+++ b/forester/aptx/aptx_example_files/species_extraction_yes.nh
@@ -0,0 +1 @@
+((((FIBG_PETMA:1.695770,O93568_CHICK-Gallus_gallus:0.257320):0.396670,(A8E5P0_DANRE|26-168:0.145640,Q4SRZ7_PEA_same:0.547700)1.000:0.792700):0.000140,(FIBG_HUMAN-homo-sapiens:0.078620,(FIBG_RAT:0.149570,FIBG_BOVIN:0.244750)0.847:0.044440)0.891:0.179090):0.045500,FIBG_PIG:0.739450);