merge

diff --git a/examples/testdata/simpleGff3.gff b/examples/testdata/simpleGff3.gff
deleted file mode 100644 (file)
index d363bae..0000000
--- a/examples/testdata/simpleGff3.gff
+++ /dev/null
@@ -1,28 +0,0 @@
-##gff-version 2
-# exonerate output in gff2 format; not gff3 because
-#   - 'similarity' is not a Sequence Ontology term
-#   - attributes' name/values are separated by space ' ' not equals '='
-##source-version exonerate:protein2genome:local 2.2.0
-##date 2015-01-16
-##type DNA
-#
-# exonerate run with --showtargetgff generates 'features on the target' i.e. mappings to the query
-# tab-delimited
-# seqname source feature start end score strand frame attributes
-#
-seq1   exonerate:protein2genome:local  gene    8       11      3652    -       .       gene_id 0 ; sequence seq2 ; gene_orientation .
-seq1   exonerate:protein2genome:local  cds     9       11      .       -       .       
-seq1   exonerate:protein2genome:local  exon    9       11      .       -       .       insertions 3 ; deletions 6
-#seq1  exonerate:protein2genome:local  similarity      8       11      3652    -       .       alignment_id 0 ; Query seq2 ; Align 11 1 3
-seq1   exonerate:protein2genome:local  similarity      9       11      3652    -       .       alignment_id 0 ; Query seq2 ; Align 11 1 3
-#
-# appending FASTA sequences is strictly a GFF3 format feature
-# but Jalview is able to handle this mixture of GFF2 / GFF3 :-)
-#
-##FASTA
->seq1
-ACTACGACACGACGACGACGACG
->seq2
-CDEQEATGTQDAQEQAQC
-
-