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diff --git a/src/jalview/gui/VamsasApplication.java b/src/jalview/gui/VamsasApplication.java
index bfe5487..121a200 100644 (file)
--- a/src/jalview/gui/VamsasApplication.java
+++ b/src/jalview/gui/VamsasApplication.java
@@ -556,7 +556,7 @@ public class VamsasApplication
                 last = mstring;
                 // Cache.log.debug("Handling Mouse over "+mm.getVorbaID()+"
                 // bound to "+jvobj+" at "+mm.getPosition());
-                // position is in sequence or in aligned sequence ???????
+                // position is character position in aligned sequence
                 ssm.mouseOverVamsasSequence((SequenceI) jvobj, mm
                         .getPosition());
               }