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<em>General</em>
<ul>
- <li><!-- JAL-2379 -->Revised implementation of PCA for speed and memory efficiency (~30x faster)</li>
- <li><!-- JAL-2500 -->Trees computed on Sequence Feature Similarity may have different topology due to increased precision</li>
+ <li>
+ <!-- JAL-2379 -->Revised implementation of PCA for speed
+ and memory efficiency (~30x faster)
+ </li>
+ <li>
+ <!-- JAL-2403 -->Revised implementation of sequence
+ similarity scores as used by Tree, PCA, Shading Consensus
+ and other calculations
+ <ul>
+ <li>
+ <!-- JAL-2416 -->Score matrices are stored as resource
+ files within the Jalview codebase
+ <li>
+ <!-- JAL-2500 -->Trees computed on Sequence Feature
+ Similarity may have different topology due to
+ increased precision
+ </li>
+ </ul>
+ </li>
<li>
<!-- JAL-2360,JAL-2371, -->More robust colours and shader
model for alignments and groups
<!-- JAL-2326 -->Prevent or clear modal dialogs raised
during tests
</li>
+ <li>
+ <!-- --> <em>Scripting</em>
+ <ul>
+ <li>
+ <!-- JAL-2344 -->FileFormatI interface for describing
+ and identifying file formats (instead of String
+ constants)
+ </li>
+ <li>
+ <!-- JAL- -->
+ </li>
+
+
+ </ul>
</ul>
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