ACIBL -> KORVE
authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Mon, 18 Nov 2013 19:32:27 +0000 (19:32 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Mon, 18 Nov 2013 19:32:27 +0000 (19:32 +0000)
PYRKO -> THEKO

forester/data/tol_153.xml [moved from forester/data/tol_152.xml with 98% similarity]

similarity index 98%
rename from forester/data/tol_152.xml
rename to forester/data/tol_153.xml
index aa9a84f..1b5a1e9 100644 (file)
-<?xml version="1.0" encoding="UTF-8"?>\r
-<phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd" xmlns="http://www.phyloxml.org">\r
-<phylogeny rooted="true" rerootable="false">\r
-  <clade>\r
-    <taxonomy>\r
-      <id provider="uniprot">131567</id>\r
-      <scientific_name>cellular organisms</scientific_name>\r
-    </taxonomy>\r
-    <clade>\r
-      <taxonomy>\r
-        <scientific_name>Neomura</scientific_name>\r
-      </taxonomy>\r
-      <clade>\r
-        <taxonomy>\r
-          <id provider="uniprot">2759</id>\r
-          <scientific_name>Eukaryota</scientific_name>\r
-          <rank>superkingdom</rank>\r
-        </taxonomy>\r
-        <clade>\r
-          <name>Unikonta</name>\r
-          <clade>\r
-            <taxonomy>\r
-              <id provider="uniprot">33154</id>\r
-              <scientific_name>Opisthokonta</scientific_name>\r
-              <common_name>Fungi/Metazoa group</common_name>\r
-            </taxonomy>\r
-            <clade>\r
-              <taxonomy>\r
-                <scientific_name>Holozoa</scientific_name>\r
-              </taxonomy>\r
-              <clade>\r
-                <name>Choanoflagellatea &amp; Metazoa</name>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">33208</id>\r
-                    <scientific_name>Metazoa</scientific_name>\r
-                    <rank>kingdom</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">6072</id>\r
-                      <scientific_name>Eumetazoa</scientific_name>\r
-                    </taxonomy>\r
-                    <reference doi="10.1038/nature06614">\r
-                    </reference>\r
-                    <clade>\r
-                      <name>Bilateria &amp; Cnidaria</name>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">33213</id>\r
-                          <scientific_name>Bilateria</scientific_name>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">33511</id>\r
-                            <scientific_name>Deuterostomia</scientific_name>\r
-                          </taxonomy>\r
-                          <reference doi="10.1038/nature04336">\r
-                          </reference>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">7711</id>\r
-                              <scientific_name>Chordata</scientific_name>\r
-                              <rank>phylum</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <name>Urochordata &amp; Vertebrata</name>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">7742</id>\r
-                                  <scientific_name>Vertebrata</scientific_name>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">7776</id>\r
-                                    <scientific_name>Gnathostomata</scientific_name>\r
-                                    <common_name>jawed vertebrates</common_name>\r
-                                    <rank>superclass</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">117571</id>\r
-                                      <scientific_name>Euteleostomi</scientific_name>\r
-                                      <common_name>bony vertebrates</common_name>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">8287</id>\r
-                                        <scientific_name>Sarcopterygii</scientific_name>\r
-                                        <common_name>lobe-finned fish</common_name>\r
-                                      </taxonomy>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">32523</id>\r
-                                          <scientific_name>Tetrapoda</scientific_name>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">32524</id>\r
-                                            <scientific_name>Amniota</scientific_name>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">40674</id>\r
-                                              <scientific_name>Mammalia</scientific_name>\r
-                                              <rank>class</rank>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <name>Theria</name>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">9347</id>\r
-                                                  <scientific_name>Eutheria</scientific_name>\r
-                                                  <common_name>Placental mammals</common_name>\r
-                                                </taxonomy>\r
-                                                <reference doi="10.1002/bies.200900053">\r
-                                                  <desc>The new framework for understanding placental mammal evolution</desc>\r
-                                                </reference>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <scientific_name>Boreoeutheria</scientific_name>\r
-                                                    <synonym>Boreotheria</synonym>\r
-                                                  </taxonomy>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">314146</id>\r
-                                                      <scientific_name>Euarchontoglires</scientific_name>\r
-                                                      <rank>superorder</rank>\r
-                                                    </taxonomy>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <scientific_name>Euarchonta</scientific_name>\r
-                                                      </taxonomy>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">9443</id>\r
-                                                          <scientific_name>Primates</scientific_name>\r
-                                                          <rank>order</rank>\r
-                                                        </taxonomy>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">376913</id>\r
-                                                            <scientific_name>Haplorrhini</scientific_name>\r
-                                                            <rank>suborder</rank>\r
-                                                          </taxonomy>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">314293</id>\r
-                                                              <scientific_name>Simiiformes</scientific_name>\r
-                                                              <rank>infraorder</rank>\r
-                                                            </taxonomy>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">9526</id>\r
-                                                                <scientific_name>Catarrhini</scientific_name>\r
-                                                              </taxonomy>\r
-                                                              <clade>\r
-                                                                <taxonomy>\r
-                                                                  <id provider="uniprot">314295</id>\r
-                                                                  <scientific_name>Hominoidea</scientific_name>\r
-                                                                  <common_name>Apes</common_name>\r
-                                                                  <rank>superfamily</rank>\r
-                                                                </taxonomy>\r
-                                                                <clade>\r
-                                                                  <taxonomy>\r
-                                                                    <id provider="uniprot">9604</id>\r
-                                                                    <scientific_name>Hominidae</scientific_name>\r
-                                                                    <common_name>Great apes</common_name>\r
-                                                                    <rank>family</rank>\r
-                                                                  </taxonomy>\r
-                                                                  <clade>\r
-                                                                    <taxonomy>\r
-                                                                      <id provider="uniprot">207598</id>\r
-                                                                      <scientific_name>Homininae</scientific_name>\r
-                                                                      <rank>subfamily</rank>\r
-                                                                    </taxonomy>\r
-                                                                    <clade>\r
-                                                                      <taxonomy>\r
-                                                                        <scientific_name>Hominini</scientific_name>\r
-                                                                        <rank>tribe</rank>\r
-                                                                      </taxonomy>\r
-                                                                      <clade>\r
-                                                                        <taxonomy>\r
-                                                                          <id provider="uniprot">9606</id>\r
-                                                                          <code>HUMAN</code>\r
-                                                                          <scientific_name>Homo sapiens</scientific_name>\r
-                                                                          <common_name>Human</common_name>\r
-                                                                          <rank>species</rank>\r
-                                                                          <uri>http://www.thehindu.com/multimedia/dynamic/00029/IN05_DARWIN_29896f.jpg</uri>\r
-                                                                        </taxonomy>\r
-                                                                      </clade>\r
-                                                                      <clade>\r
-                                                                        <taxonomy>\r
-                                                                          <id provider="uniprot">9598</id>\r
-                                                                          <code>PANTR</code>\r
-                                                                          <scientific_name>Pan troglodytes</scientific_name>\r
-                                                                          <common_name>Chimpanzee</common_name>\r
-                                                                          <rank>species</rank>\r
-                                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/8b/Schimpanse_zoo-leipig.jpg/800px-Schimpanse_zoo-leipig.jpg</uri>\r
-                                                                        </taxonomy>\r
-                                                                      </clade>\r
-                                                                    </clade>\r
-                                                                    <clade>\r
-                                                                      <taxonomy>\r
-                                                                        <id provider="uniprot">9595</id>\r
-                                                                        <code>GORGO</code>\r
-                                                                        <scientific_name>Gorilla gorilla gorilla</scientific_name>\r
-                                                                        <common_name>Western lowland gorilla</common_name>\r
-                                                                        <rank>subspecies</rank>\r
-                                                                        <uri>http://upload.wikimedia.org/wikipedia/commons/c/c7/Stavenn_Gorilla_gorilla_00.jpg</uri>\r
-                                                                      </taxonomy>\r
-                                                                    </clade>\r
-                                                                  </clade>\r
-                                                                  <clade>\r
-                                                                    <taxonomy>\r
-                                                                      <id provider="uniprot">9601</id>\r
-                                                                      <code>PONAB</code>\r
-                                                                      <scientific_name>Pongo abelii</scientific_name>\r
-                                                                      <common_name>Sumatran orangutan</common_name>\r
-                                                                      <synonym>Pongo pygmaeus abelii</synonym>\r
-                                                                      <rank>species</rank>\r
-                                                                      <uri>http://www.ism.ac.jp/~hasegawa/photos/animal3b.jpg</uri>\r
-                                                                    </taxonomy>\r
-                                                                  </clade>\r
-                                                                </clade>\r
-                                                                <clade>\r
-                                                                  <taxonomy>\r
-                                                                    <id provider="uniprot">61853</id>\r
-                                                                    <code>NOMLE</code>\r
-                                                                    <scientific_name>Nomascus leucogenys</scientific_name>\r
-                                                                    <common_name>Northern white-cheeked gibbon</common_name>\r
-                                                                    <synonym>Hylobates leucogenys</synonym>\r
-                                                                    <synonym>Hylobates concolor leucogenys</synonym>\r
-                                                                    <rank>species</rank>\r
-                                                                    <uri>http://uswest.ensembl.org/img/species/pic_Nomascus_leucogenys.png</uri>\r
-                                                                    <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/1/1b/Hylobates_concolor2.jpg/450px-Hylobates_concolor2.jpg</uri>\r
-                                                                  </taxonomy>\r
-                                                                </clade>\r
-                                                              </clade>\r
-                                                              <clade>\r
-                                                                <taxonomy>\r
-                                                                  <id provider="uniprot">9528</id>\r
-                                                                  <scientific_name>Cercopithecinae</scientific_name>\r
-                                                                  <rank>subfamily</rank>\r
-                                                                </taxonomy>\r
-                                                                <clade>\r
-                                                                  <taxonomy>\r
-                                                                    <id provider="uniprot">9544</id>\r
-                                                                    <code>MACMU</code>\r
-                                                                    <scientific_name>Macaca mulatta</scientific_name>\r
-                                                                    <common_name>Rhesus macaque</common_name>\r
-                                                                    <rank>species</rank>\r
-                                                                    <uri>http://www.our-pets.net/images/rhesus1.jpg</uri>\r
-                                                                  </taxonomy>\r
-                                                                </clade>\r
-                                                                <clade>\r
-                                                                  <taxonomy>\r
-                                                                    <id provider="uniprot">9557</id>\r
-                                                                    <code>PAPHA</code>\r
-                                                                    <scientific_name>Papio hamadryas</scientific_name>\r
-                                                                    <common_name>Hamadryas baboon</common_name>\r
-                                                                    <rank>species</rank>\r
-                                                                    <uri>http://pin.primate.wisc.edu/fs/sheets/images/227lg.jpg</uri>\r
-                                                                  </taxonomy>\r
-                                                                </clade>\r
-                                                              </clade>\r
-                                                            </clade>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">9483</id>\r
-                                                                <code>CALJA</code>\r
-                                                                <scientific_name>Callithrix jacchus</scientific_name>\r
-                                                                <common_name>White-tufted-ear marmoset</common_name>\r
-                                                                <synonym>Callithrix jacchus jacchus</synonym>\r
-                                                                <rank>species</rank>\r
-                                                                <uri>http://www.arthurgrosset.com/mammals/photos/caljac28086.jpg</uri>\r
-                                                              </taxonomy>\r
-                                                            </clade>\r
-                                                          </clade>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">9478</id>\r
-                                                              <code>TARSY</code>\r
-                                                              <scientific_name>Tarsius syrichta</scientific_name>\r
-                                                              <common_name>Philippine tarsier</common_name>\r
-                                                              <rank>species</rank>\r
-                                                              <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0408/1425.jpeg</uri>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                        </clade>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">376911</id>\r
-                                                            <scientific_name>Strepsirrhini</scientific_name>\r
-                                                            <rank>suborder</rank>\r
-                                                          </taxonomy>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">30608</id>\r
-                                                              <code>MICMU</code>\r
-                                                              <scientific_name>Microcebus murinus</scientific_name>\r
-                                                              <common_name>Lesser mouse lemur</common_name>\r
-                                                              <synonym>Gray Mouse Lemur</synonym>\r
-                                                              <rank>species</rank>\r
-                                                              <uri>http://daniel.montagnon.pagesperso-orange.fr/images/MicrocbusMurinus.jpg</uri>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">30611</id>\r
-                                                              <code>OTOGA</code>\r
-                                                              <scientific_name>Otolemur garnettii</scientific_name>\r
-                                                              <common_name>Garnett&apos;s greater bushbaby</common_name>\r
-                                                              <synonym>Galago garnetti</synonym>\r
-                                                              <synonym>Small-eared galago</synonym>\r
-                                                              <synonym>Garnett&apos;s greater bushbaby</synonym>\r
-                                                              <rank>species</rank>\r
-                                                              <uri>http://www.mbweni.com/images/Mbweni%20Images/naturetrail/small-earedgalago.jpg</uri>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                        </clade>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">37347</id>\r
-                                                          <code>TUPBE</code>\r
-                                                          <scientific_name>Tupaia belangeri</scientific_name>\r
-                                                          <common_name>Common tree shrew</common_name>\r
-                                                          <synonym>Tupaia glis belangeri</synonym>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/4/44/Tupaia_belangeri.JPG/800px-Tupaia_belangeri.JPG</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">314147</id>\r
-                                                        <scientific_name>Glires</scientific_name>\r
-                                                        <common_name>Rodents and rabbits</common_name>\r
-                                                      </taxonomy>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">9989</id>\r
-                                                          <scientific_name>Rodentia</scientific_name>\r
-                                                          <rank>order</rank>\r
-                                                        </taxonomy>\r
-                                                        <clade>\r
-                                                          <name>Hystricomorpha &amp; Sciurognathi</name>\r
-                                                          <reference doi="10.1186/1471-2148-9-71">\r
-                                                            <desc>Rodent phylogeny revised: analysis of six nuclear genes from all major rodent clades.</desc>\r
-                                                          </reference>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">33553</id>\r
-                                                              <scientific_name>Sciurognathi</scientific_name>\r
-                                                              <rank>suborder</rank>\r
-                                                            </taxonomy>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">337687</id>\r
-                                                                <scientific_name>Muroidea</scientific_name>\r
-                                                              </taxonomy>\r
-                                                              <clade>\r
-                                                                <taxonomy>\r
-                                                                  <id provider="uniprot">39107</id>\r
-                                                                  <scientific_name>Murinae</scientific_name>\r
-                                                                  <rank>subfamily</rank>\r
-                                                                </taxonomy>\r
-                                                                <clade>\r
-                                                                  <taxonomy>\r
-                                                                    <id provider="uniprot">10090</id>\r
-                                                                    <code>MOUSE</code>\r
-                                                                    <scientific_name>Mus musculus</scientific_name>\r
-                                                                    <common_name>Mouse</common_name>\r
-                                                                    <rank>species</rank>\r
-                                                                    <uri>http://www.nsrl.ttu.edu/tmot1/images/mus_musc.jpg</uri>\r
-                                                                  </taxonomy>\r
-                                                                </clade>\r
-                                                                <clade>\r
-                                                                  <taxonomy>\r
-                                                                    <id provider="uniprot">10116</id>\r
-                                                                    <code>RAT</code>\r
-                                                                    <scientific_name>Rattus norvegicus</scientific_name>\r
-                                                                    <common_name>Rat</common_name>\r
-                                                                    <rank>species</rank>\r
-                                                                    <uri>http://upload.wikimedia.org/wikipedia/commons/0/01/Rattus_norvegicus_1.jpg</uri>\r
-                                                                  </taxonomy>\r
-                                                                </clade>\r
-                                                              </clade>\r
-                                                              <clade>\r
-                                                                <taxonomy>\r
-                                                                  <id provider="uniprot">10036</id>\r
-                                                                  <code>MESAU</code>\r
-                                                                  <scientific_name>Mesocricetus auratus</scientific_name>\r
-                                                                  <common_name>Golden hamster</common_name>\r
-                                                                  <rank>species</rank>\r
-                                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/85/Syrian_hamster_filling_his_cheek_pouches_with_Dandelion_leaves.JPG/800px-Syrian_hamster_filling_his_cheek_pouches_with_Dandelion_leaves.JPG</uri>\r
-                                                                </taxonomy>\r
-                                                              </clade>\r
-                                                            </clade>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">10020</id>\r
-                                                                <code>DIPOR</code>\r
-                                                                <scientific_name>Dipodomys ordii</scientific_name>\r
-                                                                <common_name>Ord&apos;s kangaroo rat</common_name>\r
-                                                                <rank>species</rank>\r
-                                                                <uri>http://www.nsrl.ttu.edu/tmot1/images/dipoordi.jpg</uri>\r
-                                                              </taxonomy>\r
-                                                            </clade>\r
-                                                          </clade>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">33550</id>\r
-                                                              <scientific_name>Hystricognathi</scientific_name>\r
-                                                              <rank>suborder</rank>\r
-                                                            </taxonomy>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">10141</id>\r
-                                                                <code>CAVPO</code>\r
-                                                                <scientific_name>Cavia porcellus</scientific_name>\r
-                                                                <common_name>Guinea pig</common_name>\r
-                                                                <rank>species</rank>\r
-                                                                <uri>http://archive.vetknowledge.com/files/images/guinea-pig---tan.jpg</uri>\r
-                                                              </taxonomy>\r
-                                                            </clade>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">10181</id>\r
-                                                                <code>HETGA</code>\r
-                                                                <scientific_name>Heterocephalus glaber</scientific_name>\r
-                                                                <common_name>Naked mole rat</common_name>\r
-                                                                <rank>species</rank>\r
-                                                                <uri>http://calphotos.berkeley.edu/imgs/512x768/9092_3191/3555/0080.jpeg</uri>\r
-                                                              </taxonomy>\r
-                                                            </clade>\r
-                                                          </clade>\r
-                                                        </clade>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">43179</id>\r
-                                                            <code>SPETR</code>\r
-                                                            <scientific_name>Spermophilus tridecemlineatus</scientific_name>\r
-                                                            <common_name>Thirteen-lined ground squirrel</common_name>\r
-                                                            <synonym>Ictidomys tridecemlineatus</synonym>\r
-                                                            <rank>species</rank>\r
-                                                            <uri>http://animaldiversity.ummz.umich.edu/site/resources/phil_myers/ADW_mammals/Rodentia/Spermophilus4345.jpg/medium.jpg</uri>\r
-                                                          </taxonomy>\r
-                                                        </clade>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">9975</id>\r
-                                                          <scientific_name>Lagomorpha</scientific_name>\r
-                                                          <rank>order</rank>\r
-                                                        </taxonomy>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">9978</id>\r
-                                                            <code>OCHPR</code>\r
-                                                            <scientific_name>Ochotona princeps</scientific_name>\r
-                                                            <common_name>Southern American pika</common_name>\r
-                                                            <rank>species</rank>\r
-                                                            <uri>http://upload.wikimedia.org/wikipedia/commons/3/3b/Ochotona_princeps.jpg</uri>\r
-                                                          </taxonomy>\r
-                                                        </clade>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">9986</id>\r
-                                                            <code>RABIT</code>\r
-                                                            <scientific_name>Oryctolagus cuniculus</scientific_name>\r
-                                                            <common_name>Rabbit</common_name>\r
-                                                            <rank>species</rank>\r
-                                                            <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/3/3b/Rabbit_in_montana.jpg/675px-Rabbit_in_montana.jpg</uri>\r
-                                                          </taxonomy>\r
-                                                        </clade>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">314145</id>\r
-                                                      <scientific_name>Laurasiatheria</scientific_name>\r
-                                                      <rank>superorder</rank>\r
-                                                    </taxonomy>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <scientific_name>Scrotifera</scientific_name>\r
-                                                      </taxonomy>\r
-                                                      <clade>\r
-                                                        <name>Perissodactyla &amp; Cetartiodactyla &amp; Chiroptera</name>\r
-                                                        <clade>\r
-                                                          <name>Perissodactyla &amp; Cetartiodactyla</name>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">91561</id>\r
-                                                              <scientific_name>Cetartiodactyla</scientific_name>\r
-                                                              <common_name>Even-toed ungulates</common_name>\r
-                                                            </taxonomy>\r
-                                                            <clade>\r
-                                                              <name>Cetruminantia &amp; Suina</name>\r
-                                                              <clade>\r
-                                                                <taxonomy>\r
-                                                                  <scientific_name>Cetruminantia</scientific_name>\r
-                                                                </taxonomy>\r
-                                                                <clade>\r
-                                                                  <taxonomy>\r
-                                                                    <id provider="uniprot">9895</id>\r
-                                                                    <scientific_name>Bovidae</scientific_name>\r
-                                                                    <rank>family</rank>\r
-                                                                  </taxonomy>\r
-                                                                  <clade>\r
-                                                                    <taxonomy>\r
-                                                                      <id provider="uniprot">9913</id>\r
-                                                                      <code>BOVIN</code>\r
-                                                                      <scientific_name>Bos taurus</scientific_name>\r
-                                                                      <common_name>Bovine</common_name>\r
-                                                                      <synonym>Bos bovis</synonym>\r
-                                                                      <rank>species</rank>\r
-                                                                      <uri>http://bioweb.uwlax.edu/bio203/s2007/hayes_katy/images/DSC01638.JPG</uri>\r
-                                                                    </taxonomy>\r
-                                                                  </clade>\r
-                                                                  <clade>\r
-                                                                    <taxonomy>\r
-                                                                      <id provider="uniprot">9940</id>\r
-                                                                      <code>SHEEP</code>\r
-                                                                      <scientific_name>Ovis aries</scientific_name>\r
-                                                                      <common_name>Sheep</common_name>\r
-                                                                      <rank>species</rank>\r
-                                                                      <uri>http://animaldiversity.ummz.umich.edu/site/resources/james_dowlinghealey/blacksheep.jpg/medium.jpg</uri>\r
-                                                                    </taxonomy>\r
-                                                                  </clade>\r
-                                                                </clade>\r
-                                                                <clade>\r
-                                                                  <taxonomy>\r
-                                                                    <id provider="uniprot">9721</id>\r
-                                                                    <scientific_name>Cetacea</scientific_name>\r
-                                                                    <common_name>Whales</common_name>\r
-                                                                    <rank>order</rank>\r
-                                                                  </taxonomy>\r
-                                                                  <clade>\r
-                                                                    <taxonomy>\r
-                                                                      <id provider="uniprot">9771</id>\r
-                                                                      <code>BALMU</code>\r
-                                                                      <scientific_name>Balaenoptera musculus</scientific_name>\r
-                                                                      <common_name>Blue whale</common_name>\r
-                                                                      <rank>species</rank>\r
-                                                                      <uri>http://2.bp.blogspot.com/_W90V87w3sr8/TT63uRT_U9I/AAAAAAAAAo8/to9O8zEeo7k/s1600/bluewhale.jpg</uri>\r
-                                                                    </taxonomy>\r
-                                                                  </clade>\r
-                                                                  <clade>\r
-                                                                    <taxonomy>\r
-                                                                      <id provider="uniprot">9739</id>\r
-                                                                      <code>TURTR</code>\r
-                                                                      <scientific_name>Tursiops truncatus</scientific_name>\r
-                                                                      <common_name>Atlantic bottle-nosed dolphin</common_name>\r
-                                                                      <synonym>Delphinus truncatus</synonym>\r
-                                                                      <rank>species</rank>\r
-                                                                      <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/a/a6/Bottlenose_Dolphin_KSC04pd0178.jpg/800px-Bottlenose_Dolphin_KSC04pd0178.jpg</uri>\r
-                                                                    </taxonomy>\r
-                                                                  </clade>\r
-                                                                </clade>\r
-                                                              </clade>\r
-                                                              <clade>\r
-                                                                <taxonomy>\r
-                                                                  <id provider="uniprot">9823</id>\r
-                                                                  <code>PIG</code>\r
-                                                                  <scientific_name>Sus scrofa</scientific_name>\r
-                                                                  <common_name>Pig</common_name>\r
-                                                                  <rank>species</rank>\r
-                                                                  <uri>http://www.batraciens-reptiles.com/sus%20scrofa2.jpg</uri>\r
-                                                                </taxonomy>\r
-                                                              </clade>\r
-                                                            </clade>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">30538</id>\r
-                                                                <code>LAMPA</code>\r
-                                                                <scientific_name>Lama guanicoe pacos</scientific_name>\r
-                                                                <common_name>Alpaca</common_name>\r
-                                                                <synonym>Lama pacos</synonym>\r
-                                                                <rank>species</rank>\r
-                                                                <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/1206/0658.jpeg</uri>\r
-                                                              </taxonomy>\r
-                                                            </clade>\r
-                                                          </clade>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">9796</id>\r
-                                                              <code>HORSE</code>\r
-                                                              <scientific_name>Equus caballus</scientific_name>\r
-                                                              <common_name>Horse</common_name>\r
-                                                              <rank>species</rank>\r
-                                                              <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0801/0088.jpeg</uri>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                        </clade>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">9397</id>\r
-                                                            <scientific_name>Chiroptera</scientific_name>\r
-                                                            <common_name>Bats</common_name>\r
-                                                            <rank>order</rank>\r
-                                                          </taxonomy>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">59463</id>\r
-                                                              <code>MYOLU</code>\r
-                                                              <scientific_name>Myotis lucifugus</scientific_name>\r
-                                                              <common_name>Little brown bat</common_name>\r
-                                                              <rank>species</rank>\r
-                                                              <uri>http://biology.lakeheadu.ca/uploads/Nature_photography/brown_bat.jpg</uri>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">132908</id>\r
-                                                              <code>PTEVA</code>\r
-                                                              <scientific_name>Pteropus vampyrus</scientific_name>\r
-                                                              <common_name>Large flying fox</common_name>\r
-                                                              <rank>species</rank>\r
-                                                              <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/5/5e/Pteropus_vampyrus1.jpg/412px-Pteropus_vampyrus1.jpg</uri>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                        </clade>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <name>Carnivora</name>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">33554</id>\r
-                                                          <scientific_name>Carnivora</scientific_name>\r
-                                                          <rank>order</rank>\r
-                                                        </taxonomy>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">379584</id>\r
-                                                            <scientific_name>Caniformia</scientific_name>\r
-                                                            <rank>suborder</rank>\r
-                                                          </taxonomy>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">9646</id>\r
-                                                              <code>AILME</code>\r
-                                                              <scientific_name>Ailuropoda melanoleuca</scientific_name>\r
-                                                              <common_name>Giant panda</common_name>\r
-                                                              <rank>species</rank>\r
-                                                              <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/3/3c/Giant_Panda_2004-03-2.jpg/800px-Giant_Panda_2004-03-2.jpg</uri>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">9615</id>\r
-                                                              <code>CANFA</code>\r
-                                                              <scientific_name>Canis familiaris</scientific_name>\r
-                                                              <common_name>Dog</common_name>\r
-                                                              <synonym>Canis lupus familiaris</synonym>\r
-                                                              <rank>subspecies</rank>\r
-                                                              <uri>http://upload.wikimedia.org/wikipedia/commons/a/ab/Wikilabrador_jardin.JPG</uri>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                        </clade>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">9685</id>\r
-                                                            <code>FELCA</code>\r
-                                                            <scientific_name>Felis catus</scientific_name>\r
-                                                            <common_name>Cat</common_name>\r
-                                                            <synonym>Felis silvestris catus</synonym>\r
-                                                            <rank>species</rank>\r
-                                                            <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/9/9b/Domestic_cat_cropped.jpg/755px-Domestic_cat_cropped.jpg</uri>\r
-                                                          </taxonomy>\r
-                                                        </clade>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">9362</id>\r
-                                                        <scientific_name>Insectivora</scientific_name>\r
-                                                        <common_name>hedgehogs, shrews, moles and others</common_name>\r
-                                                        <rank>order</rank>\r
-                                                      </taxonomy>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">9365</id>\r
-                                                          <code>ERIEU</code>\r
-                                                          <scientific_name>Erinaceus europaeus</scientific_name>\r
-                                                          <common_name>Western European hedgehog</common_name>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/d/d4/Igel01.jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">42254</id>\r
-                                                          <code>SORAR</code>\r
-                                                          <scientific_name>Sorex araneus</scientific_name>\r
-                                                          <common_name>Eurasian common shrew</common_name>\r
-                                                          <synonym>European shrew</synonym>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://www.batraciens-reptiles.com/musaraigne2.jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <scientific_name>Atlantogenata</scientific_name>\r
-                                                  </taxonomy>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">311790</id>\r
-                                                      <scientific_name>Afrotheria</scientific_name>\r
-                                                      <rank>superorder</rank>\r
-                                                    </taxonomy>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <scientific_name>Paenungulata</scientific_name>\r
-                                                      </taxonomy>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">9785</id>\r
-                                                          <code>LOXAF</code>\r
-                                                          <scientific_name>Loxodonta africana</scientific_name>\r
-                                                          <common_name>African savanna elephant</common_name>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://animaldiversity.ummz.umich.edu/site/resources/susan_hoffman/elephants.jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">9813</id>\r
-                                                          <code>PROCA</code>\r
-                                                          <scientific_name>Procavia capensis</scientific_name>\r
-                                                          <common_name>Cape hyrax</common_name>\r
-                                                          <synonym>Rock dassie</synonym>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/1206/0460.jpeg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">9371</id>\r
-                                                        <code>ECHTE</code>\r
-                                                        <scientific_name>Echinops telfairi</scientific_name>\r
-                                                        <common_name>Lesser hedgehog tenrec</common_name>\r
-                                                        <rank>species</rank>\r
-                                                        <uri>http://animaldiversity.ummz.umich.edu/site/resources/david_kupitz/etelfairi.jpg</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">9348</id>\r
-                                                      <scientific_name>Xenarthra</scientific_name>\r
-                                                      <synonym>Edentata</synonym>\r
-                                                      <rank>superorder</rank>\r
-                                                    </taxonomy>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">9358</id>\r
-                                                        <code>CHOHO</code>\r
-                                                        <scientific_name>Choloepus hoffmanni</scientific_name>\r
-                                                        <common_name>Hoffmann&apos;s two-fingered sloth</common_name>\r
-                                                        <rank>species</rank>\r
-                                                        <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/89/Sloth8.jpg/800px-Sloth8.jpg</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">9361</id>\r
-                                                        <code>DASNO</code>\r
-                                                        <scientific_name>Dasypus novemcinctus</scientific_name>\r
-                                                        <common_name>Nine-banded armadillo</common_name>\r
-                                                        <rank>species</rank>\r
-                                                        <uri>http://anthropometaphors.files.wordpress.com/2008/11/nine-banded-armadillo41.jpg</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">9263</id>\r
-                                                  <scientific_name>Metatheria</scientific_name>\r
-                                                  <common_name>Marsupials</common_name>\r
-                                                </taxonomy>\r
-                                                <reference doi="10.1016/j.ympev.2004.05.004">\r
-                                                  <desc>First combined cladistic analysis of marsupial mammal interrelationships</desc>\r
-                                                </reference>\r
-                                                <reference>\r
-                                                </reference>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <scientific_name>Eometatheria</scientific_name>\r
-                                                  </taxonomy>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">9315</id>\r
-                                                      <code>MACEU</code>\r
-                                                      <scientific_name>Macropus eugenii</scientific_name>\r
-                                                      <common_name>Tammar wallaby</common_name>\r
-                                                      <rank>species</rank>\r
-                                                      <uri>http://upload.wikimedia.org/wikipedia/commons/d/de/Macropus_eugenii.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">9305</id>\r
-                                                      <code>SARHA</code>\r
-                                                      <scientific_name>Sarcophilus harrisii</scientific_name>\r
-                                                      <common_name>Tasmanian devil</common_name>\r
-                                                      <synonym>Sarcophilus laniarius</synonym>\r
-                                                      <rank>species</rank>\r
-                                                      <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/3/3b/Sarcophilus_harrisii_-Healesville_Sanctuary-8a.jpg/727px-Sarcophilus_harrisii_-Healesville_Sanctuary-8a.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">13616</id>\r
-                                                    <code>MONDO</code>\r
-                                                    <scientific_name>Monodelphis domestica</scientific_name>\r
-                                                    <common_name>Short-tailed gray opossum</common_name>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://animaldiversity.ummz.umich.edu/site/resources/phil_myers/classic/monodelphis.jpg/medium.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">9258</id>\r
-                                                <code>ORNAN</code>\r
-                                                <scientific_name>Ornithorhynchus anatinus</scientific_name>\r
-                                                <common_name>Duckbill platypus</common_name>\r
-                                                <rank>species</rank>\r
-                                                <uri>http://upload.wikimedia.org/wikipedia/commons/1/12/Platypus_BrokenRiver_QLD_Australia2.png</uri>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">8457</id>\r
-                                              <scientific_name>Sauropsida</scientific_name>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <name>Archosauria &amp; Testudines</name>\r
-                                              <reference doi="10.1038/ng.2615">\r
-                                                <desc>The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan</desc>\r
-                                              </reference>\r
-                                              <reference>\r
-                                              </reference>\r
-                                              <reference>\r
-                                              </reference>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">8492</id>\r
-                                                  <scientific_name>Archosauria</scientific_name>\r
-                                                </taxonomy>\r
-                                                <clade>\r
-                                                  <name>Neognathae</name>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">8825</id>\r
-                                                    <scientific_name>Neognathae</scientific_name>\r
-                                                    <rank>superorder</rank>\r
-                                                  </taxonomy>\r
-                                                  <clade>\r
-                                                    <name>Phasianidae &amp; Anatidae (waterfowl)</name>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">9005</id>\r
-                                                        <scientific_name>Phasianidae</scientific_name>\r
-                                                        <rank>family</rank>\r
-                                                      </taxonomy>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">9031</id>\r
-                                                          <code>CHICK</code>\r
-                                                          <scientific_name>Gallus gallus</scientific_name>\r
-                                                          <common_name>Chicken</common_name>\r
-                                                          <synonym>Gallus domesticus</synonym>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/f/f8/Rooster04_adjusted.jpg/800px-Rooster04_adjusted.jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">9103</id>\r
-                                                          <code>MELGA</code>\r
-                                                          <scientific_name>Meleagris gallopavo</scientific_name>\r
-                                                          <common_name>Common turkey</common_name>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0205/0858.jpeg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">8839</id>\r
-                                                        <code>ANAPL</code>\r
-                                                        <scientific_name>Anas platyrhynchos</scientific_name>\r
-                                                        <common_name>Domestic duck</common_name>\r
-                                                        <synonym>Anas boschas</synonym>\r
-                                                        <rank>species</rank>\r
-                                                        <uri>http://content.ornith.cornell.edu/UEWebApp/images/MPR_070302_100009_L.jpg</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">59729</id>\r
-                                                      <code>TAEGU</code>\r
-                                                      <scientific_name>Taeniopygia guttata</scientific_name>\r
-                                                      <common_name>Zebra finch</common_name>\r
-                                                      <synonym>Poephila guttata</synonym>\r
-                                                      <rank>species</rank>\r
-                                                      <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/84/Taeniopygia_guttata_-_front_view_-_dundee_wildlife_park.jpg/355px-Taeniopygia_guttata_-_front_view_-_dundee_wildlife_park.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">8496</id>\r
-                                                    <code>ALLMI</code>\r
-                                                    <scientific_name>Alligator mississippiensis</scientific_name>\r
-                                                    <common_name>American alligator</common_name>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://www.herpcenter.com/reptile-caresheets/images/american_alligator.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">13735</id>\r
-                                                  <code>PELSI</code>\r
-                                                  <scientific_name>Pelodiscus sinensis</scientific_name>\r
-                                                  <authority>(Wiegmann, 1835) Cox et al. 1998</authority>\r
-                                                  <common_name>Chinese softshell turtle</common_name>\r
-                                                  <synonym>Trionyx sinensis</synonym>\r
-                                                  <rank>species</rank>\r
-                                                  <uri>http://www.chelonia.org/PsinensisTR1.jpg</uri>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">28377</id>\r
-                                                <code>ANOCA</code>\r
-                                                <scientific_name>Anolis carolinensis</scientific_name>\r
-                                                <authority>Voigt, 1832</authority>\r
-                                                <common_name>Green anole</common_name>\r
-                                                <synonym>American chameleon</synonym>\r
-                                                <rank>species</rank>\r
-                                                <uri>http://content61.eol.org/content/2009/09/20/01/05528_580_360.jpg</uri>\r
-                                                <uri>http://content61.eol.org/content/2008/10/08/13/66818_580_360.jpg</uri>\r
-                                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/5/5a/Anolis_carolinensis.jpg/800px-Anolis_carolinensis.jpg</uri>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">8353</id>\r
-                                            <scientific_name>Xenopus</scientific_name>\r
-                                            <rank>genus</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">8355</id>\r
-                                              <code>XENLA</code>\r
-                                              <scientific_name>Xenopus laevis</scientific_name>\r
-                                              <authority>Daudin, 1802</authority>\r
-                                              <common_name>African clawed frog</common_name>\r
-                                              <synonym>Bufo laevis</synonym>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://upload.wikimedia.org/wikipedia/commons/e/e3/Xenopus_laevis.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">8364</id>\r
-                                              <code>XENTR</code>\r
-                                              <scientific_name>Xenopus tropicalis</scientific_name>\r
-                                              <common_name>Western clawed frog</common_name>\r
-                                              <synonym>Silurana tropicalis</synonym>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://genoweb.univ-rennes1.fr/OGP/xenopus%20tropicalis.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">7897</id>\r
-                                          <code>LATCH</code>\r
-                                          <scientific_name>Latimeria chalumnae</scientific_name>\r
-                                          <common_name>West Indian ocean coelacanth</common_name>\r
-                                          <rank>species</rank>\r
-                                          <uri>http://marinebio.org/upload/Latimeria-chalumnae/1.jpg</uri>\r
-                                          <uri>http://images.nationalgeographic.com/wpf/media-live/photos/000/005/cache/coelacanth_501_600x450.jpg</uri>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <name>Teleostei</name>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">32443</id>\r
-                                        <scientific_name>Teleostei</scientific_name>\r
-                                      </taxonomy>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">123368</id>\r
-                                          <scientific_name>Acanthomorpha</scientific_name>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">32485</id>\r
-                                            <scientific_name>Percomorpha</scientific_name>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">129949</id>\r
-                                              <scientific_name>Smegmamorpha</scientific_name>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">32456</id>\r
-                                                <scientific_name>Atherinomorpha</scientific_name>\r
-                                              </taxonomy>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">8090</id>\r
-                                                  <code>ORYLA</code>\r
-                                                  <scientific_name>Oryzias latipes</scientific_name>\r
-                                                  <common_name>Medaka fish</common_name>\r
-                                                  <synonym>Japanese ricefish</synonym>\r
-                                                  <rank>species</rank>\r
-                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/4/49/Nihonmedaka.jpg</uri>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">8083</id>\r
-                                                  <code>XIPMA</code>\r
-                                                  <scientific_name>Xiphophorus maculatus</scientific_name>\r
-                                                  <authority>Guenther, 1866</authority>\r
-                                                  <common_name>Southern platyfish</common_name>\r
-                                                  <synonym>Platypoecilus maculatus</synonym>\r
-                                                  <rank>species</rank>\r
-                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/6/6b/Poissons_06.jpg</uri>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">69293</id>\r
-                                                <code>GASAC</code>\r
-                                                <scientific_name>Gasterosteus aculeatus</scientific_name>\r
-                                                <common_name>Three-spined stickleback</common_name>\r
-                                                <rank>species</rank>\r
-                                                <uri>http://www.jjphoto.dk/fish_archive/freshwater/gasterosteus_aculeatus.jpg</uri>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">31031</id>\r
-                                              <scientific_name>Tetraodontidae</scientific_name>\r
-                                              <common_name>puffers</common_name>\r
-                                              <rank>family</rank>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">31033</id>\r
-                                                <code>TAKRU</code>\r
-                                                <scientific_name>Takifugu rubripes</scientific_name>\r
-                                                <common_name>Japanese pufferfish</common_name>\r
-                                                <synonym>Fugu rubripes</synonym>\r
-                                                <rank>species</rank>\r
-                                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/2/25/Fugu_in_Tank.jpg/800px-Fugu_in_Tank.jpg</uri>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">99883</id>\r
-                                                <code>TETNG</code>\r
-                                                <scientific_name>Tetraodon nigroviridis</scientific_name>\r
-                                                <common_name>Green puffer</common_name>\r
-                                                <synonym>Chelonodon nigroviridis</synonym>\r
-                                                <rank>species</rank>\r
-                                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/b/b6/Tetraodon_nigroviridis_1.jpg/800px-Tetraodon_nigroviridis_1.jpg</uri>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">8128</id>\r
-                                              <code>ORENI</code>\r
-                                              <scientific_name>Tilapia nilotica</scientific_name>\r
-                                              <authority>Linnaeus, 1758</authority>\r
-                                              <common_name>Nile tilapia</common_name>\r
-                                              <synonym>Tilapia nilotica</synonym>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://www.jjphoto.dk/fish_archive/warm_freshwater/oreochromis_niloticus_niloticus.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">8049</id>\r
-                                            <code>GADMO</code>\r
-                                            <scientific_name>Gadus morhua</scientific_name>\r
-                                            <common_name>Atlantic cod</common_name>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://www.marinbi.com/g-morhua.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">7955</id>\r
-                                          <code>DANRE</code>\r
-                                          <scientific_name>Danio rerio</scientific_name>\r
-                                          <common_name>Zebrafish</common_name>\r
-                                          <synonym>Brachydanio rerio</synonym>\r
-                                          <rank>species</rank>\r
-                                          <uri>http://fishbase.org.cn/images/species/Darer_m0.jpg</uri>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">7868</id>\r
-                                      <code>CALMI</code>\r
-                                      <scientific_name>Callorhynchus milii</scientific_name>\r
-                                      <common_name>Australian ghost shark</common_name>\r
-                                      <synonym>Australian ghost shark</synonym>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://www.tudiscovery.com/tiburones/que_es/popup_que/asset/07914907646434433_elephant_shark_380x290.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">7757</id>\r
-                                    <code>PETMA</code>\r
-                                    <scientific_name>Petromyzon marinus</scientific_name>\r
-                                    <common_name>Sea lamprey</common_name>\r
-                                    <rank>species</rank>\r
-                                    <uri>http://www.uk-fish.info/pics/sealampray01.jpg</uri>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <name>Urochordata</name>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">7712</id>\r
-                                  <scientific_name>Urochordata</scientific_name>\r
-                                  <rank>subphylum</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">7718</id>\r
-                                    <scientific_name>Ciona</scientific_name>\r
-                                    <rank>genus</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">7719</id>\r
-                                      <code>CIOIN</code>\r
-                                      <scientific_name>Ciona intestinalis</scientific_name>\r
-                                      <common_name>Transparent sea squirt</common_name>\r
-                                      <synonym>Ascidia intestinalis</synonym>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://adl.brs.gov.au/marinepests/images/Ciona_intestinalis2.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">51511</id>\r
-                                      <code>CIOSA</code>\r
-                                      <scientific_name>Ciona savignyi</scientific_name>\r
-                                      <common_name>Pacific transparent sea squirt</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://www.pnwscuba.com/invasives/photos/ciona4.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="ncbi">34765</id>\r
-                                    <code>OIKDI</code>\r
-                                    <scientific_name>Oikopleura dioica</scientific_name>\r
-                                    <common_name>Tunicate</common_name>\r
-                                    <rank>species</rank>\r
-                                    <uri>http://jellieszone.com/images/oikopleura.jpg</uri>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">7739</id>\r
-                                <code>BRAFL</code>\r
-                                <scientific_name>Branchiostoma floridae</scientific_name>\r
-                                <common_name>Florida lancelet</common_name>\r
-                                <synonym>Amphioxus</synonym>\r
-                                <rank>species</rank>\r
-                                <uri>http://www.nicerweb.com/sketches/video/PBS-ShapeOfLife/4.8_BonesBrawnBrains/Branchiostoma_floridae.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <name>Hemichordata &amp; Echinodermata</name>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">10224</id>\r
-                                <code>SACKO</code>\r
-                                <scientific_name>Saccoglossus kowalevskii</scientific_name>\r
-                                <authority>Agassiz, 1873</authority>\r
-                                <common_name>Acorn worm</common_name>\r
-                                <rank>species</rank>\r
-                                <uri>http://faculty.washington.edu/bjswalla/Hemichordata/Enteropneusta/SkowAK.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">7668</id>\r
-                                <code>STRPU</code>\r
-                                <scientific_name>Strongylocentrotus purpuratus</scientific_name>\r
-                                <common_name>Purple sea urchin</common_name>\r
-                                <rank>species</rank>\r
-                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/f/f4/Strongylocentrotus_purpuratus_1.jpg/724px-Strongylocentrotus_purpuratus_1.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">33317</id>\r
-                            <scientific_name>Protostomia</scientific_name>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">1206794</id>\r
-                              <scientific_name>Ecdysozoa</scientific_name>\r
-                            </taxonomy>\r
-                            <reference doi="10.1098/rstb.2007.2243">\r
-                              <desc>The evolution of the Ecdysozoa</desc>\r
-                            </reference>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">88770</id>\r
-                                <scientific_name>Panarthropoda</scientific_name>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <name>Onychophora &amp; Arthropoda</name>\r
-                                <reference doi="10.1073/pnas.1105499108">\r
-                                  <desc>MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda</desc>\r
-                                </reference>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">6656</id>\r
-                                    <scientific_name>Arthropoda</scientific_name>\r
-                                    <rank>phylum</rank>\r
-                                  </taxonomy>\r
-                                  <reference doi="10.1098/rspb.2010.0590">\r
-                                    <desc>A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata</desc>\r
-                                  </reference>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">197563</id>\r
-                                      <scientific_name>Mandibulata</scientific_name>\r
-                                    </taxonomy>\r
-                                    <reference doi="doi:10.1038/ncomms3485">\r
-                                      <desc>Arthropod fossil data increase congruence of morphological and molecular phylogenies</desc>\r
-                                    </reference>\r
-                                    <reference>\r
-                                    </reference>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">197562</id>\r
-                                        <scientific_name>Pancrustacea</scientific_name>\r
-                                      </taxonomy>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">6960</id>\r
-                                          <scientific_name>Hexapoda</scientific_name>\r
-                                          <rank>superclass</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">50557</id>\r
-                                            <scientific_name>Insecta</scientific_name>\r
-                                            <common_name>true insects</common_name>\r
-                                            <rank>class</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">33340</id>\r
-                                              <scientific_name>Neoptera</scientific_name>\r
-                                              <rank>subclass</rank>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">33392</id>\r
-                                                <scientific_name>Endopterygota</scientific_name>\r
-                                                <rank>infraclass</rank>\r
-                                              </taxonomy>\r
-                                              <clade>\r
-                                                <name>Hymenoptera &amp; Lepidoptera &amp; Diptera</name>\r
-                                                <clade>\r
-                                                  <name>Lepidoptera &amp; Diptera</name>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">7147</id>\r
-                                                      <scientific_name>Diptera</scientific_name>\r
-                                                      <rank>order</rank>\r
-                                                    </taxonomy>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">7215</id>\r
-                                                        <scientific_name>Drosophila</scientific_name>\r
-                                                        <common_name>fruit flies</common_name>\r
-                                                        <rank>genus</rank>\r
-                                                      </taxonomy>\r
-                                                      <reference doi="10.1534/genetics.111.126540">\r
-                                                        <desc>The 19 Genomes of Drosophila: A BAC Library Resource for Genus-Wide and Genome-Scale Comparative Evolutionary Research</desc>\r
-                                                      </reference>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">32341</id>\r
-                                                          <scientific_name>Sophophora</scientific_name>\r
-                                                          <rank>subgenus</rank>\r
-                                                        </taxonomy>\r
-                                                        <clade>\r
-                                                          <name>melanogaster &amp; pseudoobscura subgroups</name>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">32346</id>\r
-                                                              <scientific_name>melanogaster group</scientific_name>\r
-                                                            </taxonomy>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">32351</id>\r
-                                                                <scientific_name>melanogaster subgroup</scientific_name>\r
-                                                              </taxonomy>\r
-                                                              <clade>\r
-                                                                <name>DROSE &amp; DROSI &amp; DROME &amp; DROYA</name>\r
-                                                                <clade>\r
-                                                                  <name>DROSE &amp; DROSI &amp; DROME</name>\r
-                                                                  <clade>\r
-                                                                    <name>DROSE &amp; DROSI</name>\r
-                                                                    <clade>\r
-                                                                      <taxonomy>\r
-                                                                        <id provider="uniprot">7238</id>\r
-                                                                        <code>DROSE</code>\r
-                                                                        <scientific_name>Drosophila sechellia</scientific_name>\r
-                                                                        <common_name>Fruit fly</common_name>\r
-                                                                        <rank>species</rank>\r
-                                                                      </taxonomy>\r
-                                                                    </clade>\r
-                                                                    <clade>\r
-                                                                      <taxonomy>\r
-                                                                        <id provider="uniprot">7240</id>\r
-                                                                        <code>DROSI</code>\r
-                                                                        <scientific_name>Drosophila simulans</scientific_name>\r
-                                                                        <common_name>Fruit fly</common_name>\r
-                                                                        <rank>species</rank>\r
-                                                                      </taxonomy>\r
-                                                                    </clade>\r
-                                                                  </clade>\r
-                                                                  <clade>\r
-                                                                    <taxonomy>\r
-                                                                      <id provider="uniprot">7227</id>\r
-                                                                      <code>DROME</code>\r
-                                                                      <scientific_name>Drosophila melanogaster</scientific_name>\r
-                                                                      <common_name>Fruit fly</common_name>\r
-                                                                      <rank>species</rank>\r
-                                                                      <uri>http://www.snv.jussieu.fr/bmedia/ATP/images/dro-mal1.jpg</uri>\r
-                                                                    </taxonomy>\r
-                                                                  </clade>\r
-                                                                </clade>\r
-                                                                <clade>\r
-                                                                  <taxonomy>\r
-                                                                    <id provider="uniprot">7245</id>\r
-                                                                    <code>DROYA</code>\r
-                                                                    <scientific_name>Drosophila yakuba</scientific_name>\r
-                                                                    <common_name>Fruit fly</common_name>\r
-                                                                    <rank>species</rank>\r
-                                                                  </taxonomy>\r
-                                                                </clade>\r
-                                                              </clade>\r
-                                                              <clade>\r
-                                                                <taxonomy>\r
-                                                                  <id provider="uniprot">7220</id>\r
-                                                                  <code>DROER</code>\r
-                                                                  <scientific_name>Drosophila erecta</scientific_name>\r
-                                                                  <common_name>Fruit fly</common_name>\r
-                                                                  <rank>species</rank>\r
-                                                                </taxonomy>\r
-                                                              </clade>\r
-                                                            </clade>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">7217</id>\r
-                                                                <code>DROAN</code>\r
-                                                                <scientific_name>Drosophila ananassae</scientific_name>\r
-                                                                <common_name>Fruit fly</common_name>\r
-                                                                <rank>species</rank>\r
-                                                              </taxonomy>\r
-                                                            </clade>\r
-                                                          </clade>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">32358</id>\r
-                                                              <scientific_name>pseudoobscura subgroup</scientific_name>\r
-                                                            </taxonomy>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">7234</id>\r
-                                                                <code>DROPE</code>\r
-                                                                <scientific_name>Drosophila persimilis</scientific_name>\r
-                                                                <common_name>Fruit fly</common_name>\r
-                                                                <rank>species</rank>\r
-                                                              </taxonomy>\r
-                                                            </clade>\r
-                                                            <clade>\r
-                                                              <taxonomy>\r
-                                                                <id provider="uniprot">46245</id>\r
-                                                                <code>DROPS</code>\r
-                                                                <scientific_name>Drosophila pseudoobscura pseudoobscura</scientific_name>\r
-                                                                <common_name>Fruit fly</common_name>\r
-                                                                <rank>subspecies</rank>\r
-                                                                <uri>http://www.naylorgallery.com/wp-content/uploads/fly4stack01small.jpg</uri>\r
-                                                              </taxonomy>\r
-                                                            </clade>\r
-                                                          </clade>\r
-                                                        </clade>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">7260</id>\r
-                                                            <code>DROWI</code>\r
-                                                            <scientific_name>Drosophila willistoni</scientific_name>\r
-                                                            <common_name>Fruit fly</common_name>\r
-                                                            <rank>species</rank>\r
-                                                          </taxonomy>\r
-                                                        </clade>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <name>Drosophila subgenus &amp; Hawaiian Drosophila</name>\r
-                                                        <clade>\r
-                                                          <name>Drosophila subgenus</name>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">7230</id>\r
-                                                              <code>DROMO</code>\r
-                                                              <scientific_name>Drosophila mojavensis</scientific_name>\r
-                                                              <common_name>Fruit fly</common_name>\r
-                                                              <rank>species</rank>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                          <clade>\r
-                                                            <taxonomy>\r
-                                                              <id provider="uniprot">7244</id>\r
-                                                              <code>DROVI</code>\r
-                                                              <scientific_name>Drosophila virilis</scientific_name>\r
-                                                              <common_name>Fruit fly</common_name>\r
-                                                              <rank>species</rank>\r
-                                                            </taxonomy>\r
-                                                          </clade>\r
-                                                        </clade>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">7222</id>\r
-                                                            <code>DROGR</code>\r
-                                                            <scientific_name>Drosophila grimshawi</scientific_name>\r
-                                                            <common_name>Fruit fly</common_name>\r
-                                                            <synonym>Idiomyia grimshawi</synonym>\r
-                                                            <rank>species</rank>\r
-                                                            <uri>http://www.pacificislandbooks.com/fruitf~1.jpg</uri>\r
-                                                          </taxonomy>\r
-                                                        </clade>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">7157</id>\r
-                                                        <scientific_name>Culicidae</scientific_name>\r
-                                                        <common_name>mosquitos</common_name>\r
-                                                        <rank>family</rank>\r
-                                                      </taxonomy>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">7159</id>\r
-                                                          <code>AEDAE</code>\r
-                                                          <scientific_name>Aedes aegypti</scientific_name>\r
-                                                          <common_name>Yellowfever mosquito</common_name>\r
-                                                          <synonym>Culex aegypti</synonym>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/4/48/Aedes_aegypti_biting_human.jpg/757px-Aedes_aegypti_biting_human.jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">7165</id>\r
-                                                          <code>ANOGA</code>\r
-                                                          <scientific_name>Anopheles gambiae</scientific_name>\r
-                                                          <common_name>African malaria mosquito</common_name>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/e/e9/Anopheles_gambiae_Mosquito.jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">7175</id>\r
-                                                          <code>CULPI</code>\r
-                                                          <scientific_name>Culex pipiens</scientific_name>\r
-                                                          <common_name>House mosquito</common_name>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/3/35/Culex_pipiens_2007-1.jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">104431</id>\r
-                                                      <scientific_name>Obtectomera</scientific_name>\r
-                                                    </taxonomy>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">7091</id>\r
-                                                        <code>BOMMO</code>\r
-                                                        <scientific_name>Bombyx mori</scientific_name>\r
-                                                        <common_name>Silk moth</common_name>\r
-                                                        <rank>species</rank>\r
-                                                        <uri>http://lepidoptera.butterflyhouse.com.au/bomb/mori5.jpg</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">13037</id>\r
-                                                        <code>DANPL</code>\r
-                                                        <scientific_name>Danaus plexippus</scientific_name>\r
-                                                        <common_name>Monarch butterfly</common_name>\r
-                                                        <rank>species</rank>\r
-                                                        <uri>http://bugguide.net/images/cache/7QFRQQYRJKQ0X0YQM0Z02000U0ORKQR090H07QBRFKNRQQH0P0YRE0YRZQARLQWR70JQG09RYKDQJKCQFKFQJKTQI0.jpg</uri>\r
-                                                        <uri>http://bugguide.net/images/raw/7RTZXR3Z6RRHKZHH8RVL8RRHMZKHERKHQZLHGRLHPR1LERQH4RCZYL1LGRHH7ZZHER1LGRSH7R6L.jpg</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">7400</id>\r
-                                                    <scientific_name>Apocrita</scientific_name>\r
-                                                    <common_name>wasps, ants and bees</common_name>\r
-                                                  </taxonomy>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">7434</id>\r
-                                                      <scientific_name>Aculeata</scientific_name>\r
-                                                      <rank>suborder</rank>\r
-                                                    </taxonomy>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">36668</id>\r
-                                                        <scientific_name>Formicidae</scientific_name>\r
-                                                        <common_name>ants</common_name>\r
-                                                        <rank>family</rank>\r
-                                                      </taxonomy>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">143999</id>\r
-                                                          <scientific_name>Attini</scientific_name>\r
-                                                          <rank>tribe</rank>\r
-                                                        </taxonomy>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">12957</id>\r
-                                                            <code>ATTCE</code>\r
-                                                            <scientific_name>Atta cephalotes</scientific_name>\r
-                                                            <authority>Linnaeus, 1758</authority>\r
-                                                            <common_name>Leafcutter ant</common_name>\r
-                                                            <rank>species</rank>\r
-                                                            <uri>http://upload.wikimedia.org/wikipedia/commons/4/4e/Leaf-cutting_ant.jpg</uri>\r
-                                                          </taxonomy>\r
-                                                        </clade>\r
-                                                        <clade>\r
-                                                          <taxonomy>\r
-                                                            <id provider="uniprot">103372</id>\r
-                                                            <code>ACREC</code>\r
-                                                            <scientific_name>Acromyrmex echinatior</scientific_name>\r
-                                                            <authority>Forel, 1899</authority>\r
-                                                            <common_name>Panamanian leafcutter ant</common_name>\r
-                                                            <synonym>Acromyrmex octospinosus echinatior</synonym>\r
-                                                            <rank>species</rank>\r
-                                                            <uri>http://hymenopteragenome.org/acromyrmex/sites/hymenopteragenome.org.acromyrmex/files/Acromyrmex_echinatior2.jpg</uri>\r
-                                                          </taxonomy>\r
-                                                        </clade>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">104421</id>\r
-                                                          <code>CAMFO</code>\r
-                                                          <scientific_name>Camponotus floridanus</scientific_name>\r
-                                                          <authority>Buckley, 1866</authority>\r
-                                                          <common_name>Florida carpenter ant</common_name>\r
-                                                          <rank>species</rank>\r
-                                                          <uri>http://bugguide.net/images/cache/5RLH6RRHXRALZZ9LZZ6L3LBLXZBL2RFZHZ9L7ZKH4RDZ3L3Z2RZHKZCLMZKH4R0H6R3Z6RSHMZBL5RRH5ROLKZELLZ.jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">7460</id>\r
-                                                        <code>APIME</code>\r
-                                                        <scientific_name>Apis mellifera</scientific_name>\r
-                                                        <common_name>Honeybee</common_name>\r
-                                                        <rank>species</rank>\r
-                                                        <uri>http://www.floridanature.org/photos/Apis_mellifera_6b_&amp;_Trifolium_sp.,_TBP,_Tallahassee,_20030323.jpg</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">7425</id>\r
-                                                      <code>NASVI</code>\r
-                                                      <scientific_name>Nasonia vitripennis</scientific_name>\r
-                                                      <common_name>Parasitic wasp</common_name>\r
-                                                      <rank>species</rank>\r
-                                                      <uri>http://www.freshpond.org/nasonia.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">7070</id>\r
-                                                  <code>TRICA</code>\r
-                                                  <scientific_name>Tribolium castaneum</scientific_name>\r
-                                                  <common_name>Red flour beetle</common_name>\r
-                                                  <rank>species</rank>\r
-                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/d/da/Tribolium_castaneum.jpg</uri>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">33342</id>\r
-                                                <scientific_name>Paraneoptera</scientific_name>\r
-                                                <rank>infraclass</rank>\r
-                                              </taxonomy>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">7524</id>\r
-                                                  <scientific_name>Hemiptera</scientific_name>\r
-                                                  <rank>order</rank>\r
-                                                </taxonomy>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">7029</id>\r
-                                                    <code>ACYPI</code>\r
-                                                    <scientific_name>Acyrthosiphon pisum</scientific_name>\r
-                                                    <common_name>Pea aphid</common_name>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://www.agroatlas.ru/content/pests/Acyrthosiphon_pisum/Acyrthosiphon_pisum.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">13249</id>\r
-                                                    <code>RHOPR</code>\r
-                                                    <scientific_name>Rhodnius prolixus</scientific_name>\r
-                                                    <common_name>Triatomid bug</common_name>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://upload.wikimedia.org/wikipedia/commons/b/b9/Rhodnius_prolixus.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">121224</id>\r
-                                                  <code>PEDHC</code>\r
-                                                  <scientific_name>Pediculus humanus subsp. corporis</scientific_name>\r
-                                                  <common_name>Body louse</common_name>\r
-                                                  <rank>subspecies</rank>\r
-                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/9/92/Body_lice.jpg/436px-Body_lice.jpg</uri>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                            </clade>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">568273</id>\r
-                                              <scientific_name>Machilis germanica</scientific_name>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://www.naturefg.com/images/c-animals/machilis.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">383857</id>\r
-                                            <scientific_name>Campodea fragilis</scientific_name>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://images.wikia.com/insect/images/3/3c/Campodea_fragilis.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">6657</id>\r
-                                          <scientific_name>Crustacea</scientific_name>\r
-                                          <rank>subphylum</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">6658</id>\r
-                                            <scientific_name>Branchiopoda</scientific_name>\r
-                                            <rank>class</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">6661</id>\r
-                                              <code>ARTSF</code>\r
-                                              <scientific_name>Artemia franciscana</scientific_name>\r
-                                              <common_name>Brine shrimp</common_name>\r
-                                              <synonym>Artemia sanfranciscana</synonym>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://www.aslo.org/photopost/data/518/medium/8Brine_shrimp.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">6669</id>\r
-                                              <code>DAPPU</code>\r
-                                              <scientific_name>Daphnia pulex</scientific_name>\r
-                                              <common_name>Water flea</common_name>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://www.microscopy-uk.org.uk/mag/imgjun99/daphni.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">6706</id>\r
-                                            <code>HOMAM</code>\r
-                                            <scientific_name>Homarus americanus</scientific_name>\r
-                                            <common_name>American lobster</common_name>\r
-                                            <uri>http://upload.wikimedia.org/wikipedia/commons/5/5e/Lobster.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">61985</id>\r
-                                        <scientific_name>Myriapoda</scientific_name>\r
-                                        <rank>subphylum</rank>\r
-                                      </taxonomy>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">7553</id>\r
-                                          <scientific_name>Diplopoda</scientific_name>\r
-                                          <common_name>millipedes</common_name>\r
-                                          <rank>class</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">118561</id>\r
-                                            <scientific_name>Helminthomorpha</scientific_name>\r
-                                            <rank>subclass</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">364406</id>\r
-                                              <code>ANTGC</code>\r
-                                              <scientific_name>Antrokoreana gracilipes</scientific_name>\r
-                                              <common_name>Troglobite millipede</common_name>\r
-                                              <rank>species</rank>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">174156</id>\r
-                                              <code>NARAN</code>\r
-                                              <scientific_name>Narceus annularis</scientific_name>\r
-                                              <common_name>Millipede</common_name>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://i.pbase.com/g4/59/68959/2/59864073.narceus0705062large.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">52428</id>\r
-                                            <scientific_name>Polyxenus lagurus</scientific_name>\r
-                                            <common_name>bristly millipede</common_name>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://upload.wikimedia.org/wikipedia/commons/5/54/Polyxenus.lagurus.1.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">7540</id>\r
-                                          <scientific_name>Chilopoda</scientific_name>\r
-                                          <common_name>centipedes</common_name>\r
-                                          <rank>class</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">29022</id>\r
-                                            <code>SCUCO</code>\r
-                                            <scientific_name>Scutigera coleoptrata</scientific_name>\r
-                                            <common_name>House centipede</common_name>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://upload.wikimedia.org/wikipedia/commons/1/14/Scutigera_coleoptrata.JPG</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">126957</id>\r
-                                            <code>STRMM</code>\r
-                                            <scientific_name>Strigamia maritima</scientific_name>\r
-                                            <common_name>European centipede</common_name>\r
-                                            <synonym>Geophilus maritimus</synonym>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://images.marinespecies.org/resized/22703_strigamia-maritima-male-loch-linnhe-scotland.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">6843</id>\r
-                                      <scientific_name>Chelicerata</scientific_name>\r
-                                      <rank>subphylum</rank>\r
-                                    </taxonomy>\r
-                                    <reference doi="10.1016/j.ympev.2009.08.014">\r
-                                      <desc>A 454 sequencing approach for large scale phylogenomic analysis of the common emperor scorpion (Pandinus imperator)</desc>\r
-                                    </reference>\r
-                                    <reference>\r
-                                    </reference>\r
-                                    <reference>\r
-                                    </reference>\r
-                                    <reference>\r
-                                    </reference>\r
-                                    <clade>\r
-                                      <name>Arachnida &amp; Merostomata</name>\r
-                                      <taxonomy>\r
-                                        <id>Sea spider</id>\r
-                                      </taxonomy>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">6854</id>\r
-                                          <scientific_name>Arachnida</scientific_name>\r
-                                          <rank>class</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">6933</id>\r
-                                            <scientific_name>Acari</scientific_name>\r
-                                            <common_name>mites &amp; ticks</common_name>\r
-                                            <rank>subclass</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">6945</id>\r
-                                              <code>IXOSC</code>\r
-                                              <scientific_name>Ixodes scapularis</scientific_name>\r
-                                              <common_name>Black-legged tick</common_name>\r
-                                              <synonym>Deer tick</synonym>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://upload.wikimedia.org/wikipedia/commons/8/8c/Deertick.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">32264</id>\r
-                                              <code>TETUR</code>\r
-                                              <scientific_name>Tetranychus urticae</scientific_name>\r
-                                              <common_name>Two-spotted spider mite</common_name>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/c/c5/Tetranychus-urticae.jpg/472px-Tetranychus-urticae.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">34649</id>\r
-                                            <code>MESMA</code>\r
-                                            <scientific_name>Mesobuthus martensii</scientific_name>\r
-                                            <authority>Karsch, 1879</authority>\r
-                                            <common_name>Manchurian scorpion</common_name>\r
-                                            <synonym>Buthus martensi</synonym>\r
-                                            <synonym>Buthus martensii</synonym>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://www.ntnu.no/ub/scorpion-files/m_martensii1.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">6850</id>\r
-                                          <code>LIMPO</code>\r
-                                          <scientific_name>Limulus polyphemus</scientific_name>\r
-                                          <common_name>Atlantic horseshoe crab</common_name>\r
-                                          <rank>species</rank>\r
-                                          <uri>http://www.biopix.eu/photosmedium/Limulus%20polyphemus%2000008.JPG</uri>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">258330</id>\r
-                                        <scientific_name>Ammothea hilgendorfi</scientific_name>\r
-                                        <rank>species</rank>\r
-                                        <uri>http://nathistoc.bio.uci.edu/Pycnogonida/DSCF0073b.jpg</uri>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">488523</id>\r
-                                    <scientific_name>Euperipatoides kanangrensis</scientific_name>\r
-                                    <authority>Reid, 1996</authority>\r
-                                    <rank>species</rank>\r
-                                    <uri>http://content60.eol.org/content/2012/04/05/01/26600_580_360.jpg</uri>\r
-                                    <uri>http://upload.wikimedia.org/wikipedia/commons/6/67/Euperipatoides_kanangrensis_crop.jpg</uri>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">232323</id>\r
-                                  <code>HYPDU</code>\r
-                                  <scientific_name>Hypsibius dujardini</scientific_name>\r
-                                  <common_name>Water bear</common_name>\r
-                                  <synonym>Macrobiotus dujardini</synonym>\r
-                                  <rank>species</rank>\r
-                                  <uri>http://content62.eol.org/content/2013/08/23/23/61018_580_360.jpg</uri>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">6231</id>\r
-                                <scientific_name>Nematoda</scientific_name>\r
-                                <common_name>roundworms</common_name>\r
-                                <rank>phylum</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">119089</id>\r
-                                  <scientific_name>Chromadorea</scientific_name>\r
-                                  <rank>class</rank>\r
-                                </taxonomy>\r
-                                <reference doi="10.1038/32160">\r
-                                </reference>\r
-                                <clade>\r
-                                  <name>nematode Clade V</name>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">6237</id>\r
-                                      <scientific_name>Caenorhabditis</scientific_name>\r
-                                      <rank>genus</rank>\r
-                                    </taxonomy>\r
-                                    <reference doi="10.1073/pnas.0403094101">\r
-                                      <desc>Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss</desc>\r
-                                    </reference>\r
-                                    <clade>\r
-                                      <name>CAEBR &amp; CAERE &amp; CAEBE &amp; CAEEL</name>\r
-                                      <clade>\r
-                                        <name>CAEBR &amp; CAERE &amp; CAEBE</name>\r
-                                        <clade>\r
-                                          <name>CAEBR &amp; CAERE</name>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">6238</id>\r
-                                              <code>CAEBR</code>\r
-                                              <scientific_name>Caenorhabditis briggsae</scientific_name>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://www.life.umd.edu/biology/haag/briggsae_herm.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">31234</id>\r
-                                              <code>CAERE</code>\r
-                                              <scientific_name>Caenorhabditis remanei</scientific_name>\r
-                                              <synonym>Caenorhabditis vulgaris</synonym>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://lemur.amu.edu.pl/share/php/mirnest_1.0/species_images/Caenorhabditis_remanei.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">135651</id>\r
-                                            <code>CAEBE</code>\r
-                                            <scientific_name>Caenorhabditis brenneri</scientific_name>\r
-                                            <common_name>Nematode worm</common_name>\r
-                                            <synonym>Caenorhabditis CB5161</synonym>\r
-                                            <rank>species</rank>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">6239</id>\r
-                                          <code>CAEEL</code>\r
-                                          <scientific_name>Caenorhabditis elegans</scientific_name>\r
-                                          <rank>species</rank>\r
-                                          <uri>http://homepages.ed.ac.uk/mbx/C_elegans/N2_picture.gif</uri>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">281687</id>\r
-                                        <code>CAEJA</code>\r
-                                        <scientific_name>Caenorhabditis japonica</scientific_name>\r
-                                        <rank>species</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">54126</id>\r
-                                      <code>PRIPA</code>\r
-                                      <scientific_name>Pristionchus pacificus</scientific_name>\r
-                                      <common_name>Parasitic nematode</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://smithlabdb.usc.edu/images/Pristionchus_pacificus.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">6296</id>\r
-                                    <scientific_name>Onchocercidae</scientific_name>\r
-                                    <rank>family</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">6279</id>\r
-                                      <code>BRUMA</code>\r
-                                      <scientific_name>Brugia malayi</scientific_name>\r
-                                      <common_name>Filarial nematode worm</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://upload.wikimedia.org/wikipedia/commons/4/4a/Brugia_malayi.JPG</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">6293</id>\r
-                                      <code>WUCBA</code>\r
-                                      <scientific_name>Wuchereria bancrofti</scientific_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://upload.wikimedia.org/wikipedia/commons/a/a9/Wuchereria_bancrofti_1_DPDX.JPG</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">6334</id>\r
-                                  <code>TRISP</code>\r
-                                  <scientific_name>Trichinella spiralis</scientific_name>\r
-                                  <common_name>Trichina worm</common_name>\r
-                                  <rank>species</rank>\r
-                                  <uri>http://upload.wikimedia.org/wikipedia/commons/e/e8/Trichinella_larv1_DPDx.JPG</uri>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">1206795</id>\r
-                              <scientific_name>Lophotrochozoa</scientific_name>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <name>Annelida &amp; Mollusca</name>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">6447</id>\r
-                                  <scientific_name>Mollusca</scientific_name>\r
-                                  <rank>phylum</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">6448</id>\r
-                                    <scientific_name>Gastropoda</scientific_name>\r
-                                    <rank>class</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">6500</id>\r
-                                      <code>APLCA</code>\r
-                                      <scientific_name>Aplysia californica</scientific_name>\r
-                                      <common_name>California sea hare</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://upload.wikimedia.org/wikipedia/commons/e/ef/Aplysia_californica.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">225164</id>\r
-                                      <code>LOTGI</code>\r
-                                      <scientific_name>Lottia gigantea</scientific_name>\r
-                                      <common_name>Owl limpet</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://nathistoc.bio.uci.edu/Molluscs/OwlLimpet1.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">6545</id>\r
-                                    <scientific_name>Pteriomorphia</scientific_name>\r
-                                    <synonym>Pteriomorpha</synonym>\r
-                                    <rank>subclass</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">29159</id>\r
-                                      <code>CRAGI</code>\r
-                                      <scientific_name>Crassostrea gigas</scientific_name>\r
-                                      <authority>Thunberg, 1793</authority>\r
-                                      <common_name>Pacific oyster</common_name>\r
-                                      <synonym>Crassotrea gigas</synonym>\r
-                                      <synonym>Crassostrea angulata</synonym>\r
-                                      <synonym>Ostrea gigas</synonym>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://www.marlin.ac.uk/imgs/o_cragig.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">50426</id>\r
-                                      <code>PINFU</code>\r
-                                      <scientific_name>Pinctada fucata</scientific_name>\r
-                                      <common_name>Pearl oyster</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://www.elrincondelmalacologo.com/Web%20fotos%20marinos%20no%20gasteropodos/Fotos%20coleccion/Pteriidae/Pinctada%20fucata.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">6340</id>\r
-                                  <scientific_name>Annelida</scientific_name>\r
-                                  <rank>phylum</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">283909</id>\r
-                                    <code>CTEXX</code>\r
-                                    <scientific_name>Capitella teleta</scientific_name>\r
-                                    <authority>Blake, Grassle &amp; Eckelbarger, 2009</authority>\r
-                                    <synonym>Capitella sp. I</synonym>\r
-                                    <rank>species</rank>\r
-                                    <uri>http://genome.jgi-psf.org/Capca1/capitella.jpg</uri>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">6412</id>\r
-                                    <code>HELRO</code>\r
-                                    <scientific_name>Helobdella robusta</scientific_name>\r
-                                    <common_name>Californian leech</common_name>\r
-                                    <rank>species</rank>\r
-                                    <uri>http://genome.jgi-psf.org/Helro1/Helro_leech.jpg</uri>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">6157</id>\r
-                                <scientific_name>Platyhelminthes</scientific_name>\r
-                                <rank>phylum</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <scientific_name>Neodermata</scientific_name>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">6179</id>\r
-                                    <scientific_name>Digenea</scientific_name>\r
-                                    <common_name>flukes</common_name>\r
-                                    <rank>subclass</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">6183</id>\r
-                                      <code>SCHMA</code>\r
-                                      <scientific_name>Schistosoma mansoni</scientific_name>\r
-                                      <common_name>Blood fluke</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://animaldiversity.ummz.umich.edu/site/resources/Grzimek_inverts/Trematoda/Schistosoma_mansoni.jpg/medium.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">79923</id>\r
-                                      <code>CLOSI</code>\r
-                                      <scientific_name>Clonorchis sinensi</scientific_name>\r
-                                      <authority>Cobbold, 1875</authority>\r
-                                      <common_name>Chinese liver fluke</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://people.bethel.edu/~kisrob/VirtualBiology/Planaria/Chlonorchis_sinensis.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">6211</id>\r
-                                    <code>ECHMU</code>\r
-                                    <scientific_name>Echinococcus multilocularis</scientific_name>\r
-                                    <rank>species</rank>\r
-                                    <uri>http://www.stanford.edu/group/parasites/ParaSites2003/Echinococcus/images/Echino_generalinfo.jpg</uri>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">79327</id>\r
-                                  <code>SCHMD</code>\r
-                                  <scientific_name>Schmidtea mediterranea</scientific_name>\r
-                                  <common_name>Freshwater planarian flatworm</common_name>\r
-                                  <rank>species</rank>\r
-                                  <uri>http://www.astrobio.net/images/galleryimages_images/Gallery_Image_8136.jpg</uri>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <name>Cnidaria</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">6073</id>\r
-                          <scientific_name>Cnidaria</scientific_name>\r
-                          <rank>phylum</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">6102</id>\r
-                            <scientific_name>Hexacorallia</scientific_name>\r
-                            <synonym>Ceriantipatharia</synonym>\r
-                            <synonym>Zoantharia</synonym>\r
-                            <rank>subclass</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">70779</id>\r
-                              <code>ACRDI</code>\r
-                              <scientific_name>Acropora digitifera</scientific_name>\r
-                              <common_name>Staghorn coral</common_name>\r
-                              <rank>species</rank>\r
-                              <uri>http://www.botany.hawaii.edu/basch/uhnpscesu/htms/NPSAcorl/images/acropori/acrdigitif7.jpg</uri>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">45351</id>\r
-                              <code>NEMVE</code>\r
-                              <scientific_name>Nematostella vectensis</scientific_name>\r
-                              <common_name>Starlet sea anemone</common_name>\r
-                              <rank>species</rank>\r
-                              <uri>http://genome.jgi-psf.org/Nemve1/Nematostellapolyp.jpg</uri>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">6085</id>\r
-                            <code>HMAXX</code>\r
-                            <scientific_name>Hydra magnipapillata</scientific_name>\r
-                            <authority>Ito, 1947</authority>\r
-                            <rank>species</rank>\r
-                            <uri>http://www.ncbi.nlm.nih.gov/UniGene/IMG/6085.gif</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">10228</id>\r
-                        <code>TRIAD</code>\r
-                        <scientific_name>Trichoplax adhaerens</scientific_name>\r
-                        <synonym>Trichoplax reptans</synonym>\r
-                        <rank>species</rank>\r
-                        <uri>http://genome.jgi-psf.org/Triad1/placozoan_signorovitch.jpg</uri>\r
-                      </taxonomy>\r
-                      <reference doi="10.1073/pnas.0602076103">\r
-                      </reference>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">27923</id>\r
-                      <code>MNELE</code>\r
-                      <scientific_name>Mnemiopsis leidyi</scientific_name>\r
-                      <authority>A. gassiz, 1865</authority>\r
-                      <common_name>Sea walnut</common_name>\r
-                      <synonym>Warty comb jellyfish</synonym>\r
-                      <rank>species</rank>\r
-                      <uri>http://images.marinespecies.org/resized/12797_mnemiopsis-leidyi.jpg</uri>\r
-                      <uri>http://i.livescience.com/images/i/000/014/544/original/mnemiopsis-leidyi-jellyfish-101014-02.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">400682</id>\r
-                      <code>AMPQE</code>\r
-                      <scientific_name>Amphimedon queenslandica</scientific_name>\r
-                      <authority>Hooper &amp; Van Soest, 2006</authority>\r
-                      <common_name>Sponge</common_name>\r
-                      <synonym>Reniera sp. JGI-2005</synonym>\r
-                      <rank>species</rank>\r
-                      <uri>http://images.marinespecies.org/resized/46694_amphimedon-queenslandica.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">81524</id>\r
-                    <scientific_name>Codonosigidae</scientific_name>\r
-                    <rank>family</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">81824</id>\r
-                      <code>MONBE</code>\r
-                      <scientific_name>Monosiga brevicollis</scientific_name>\r
-                      <common_name>Choanoflagellate</common_name>\r
-                      <rank>species</rank>\r
-                      <uri>http://genome.jgi-psf.org/Monbr1/Monosiga_1.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">946362</id>\r
-                      <code>SALS5</code>\r
-                      <scientific_name>Salpingoeca rosetta</scientific_name>\r
-                      <synonym>Proterospongia sp. ATCC 50818</synonym>\r
-                      <synonym>Salpingoeca sp. ATCC 50818</synonym>\r
-                      <synonym>Proterospongia sp. (strain ATCC 50818 / BSB-021)</synonym>\r
-                      <rank>species</rank>\r
-                      <uri>http://cfb.unh.edu/phycokey/Choices/Amoebae_Flagellates_Ciliates/Choanoflagellates/SALPINGOECA/salpingoeca_02_300x240_Kalle%20Olli_botany.ut.ee.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <name>Ichthyophonida &amp; Filasterea</name>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">198625</id>\r
-                    <scientific_name>Ichthyophonida</scientific_name>\r
-                    <rank>order</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">4881</id>\r
-                      <code>AMOPA</code>\r
-                      <scientific_name>Amoebidium parasiticum</scientific_name>\r
-                      <rank>species</rank>\r
-                      <uri>http://www.nhm.ku.edu/~fungi/Ilustgenera/amoebi.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">72019</id>\r
-                      <code>SARXX</code>\r
-                      <scientific_name>Sphaeroforma arctica</scientific_name>\r
-                      <rank>species</rank>\r
-                      <uri>http://www.sciencedirect.com/cache/MiamiImageURL/1-s2.0-S0168952507000236-gr2.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <scientific_name>Filasterea</scientific_name>\r
-                  </taxonomy>\r
-                  <reference doi="10.1371/journal.pone.0002098">\r
-                  </reference>\r
-                  <reference>\r
-                  </reference>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">595528</id>\r
-                      <code>CAPO3</code>\r
-                      <scientific_name>Capsaspora owczarzaki (strain ATCC 30864)</scientific_name>\r
-                      <uri>http://www.berfrois.com/wp-content/uploads/2011/03/Capsaspora_owczarzaki.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">134558</id>\r
-                      <scientific_name>Ministeria vibrans</scientific_name>\r
-                      <rank>species</rank>\r
-                      <uri>http://ars.els-cdn.com/content/image/1-s2.0-S0959437X03001382-gr2.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-              </clade>\r
-            </clade>\r
-            <clade>\r
-              <taxonomy>\r
-                <scientific_name>Holomycota</scientific_name>\r
-                <synonym>Nucletmycea</synonym>\r
-              </taxonomy>\r
-              <reference doi="10.1186/1471-2148-9-272">\r
-                <desc>Phylogenomic analyses predict sistergroup relationship of nucleariids and Fungi and paraphyly of zygomycetes with significant support</desc>\r
-              </reference>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">4751</id>\r
-                  <scientific_name>Fungi</scientific_name>\r
-                  <rank>kingdom</rank>\r
-                </taxonomy>\r
-                <reference doi="10.1186/1741-7007-10-47">\r
-                  <desc>Phylogenomics supports microsporidia as the earliest diverging clade of sequenced fungi</desc>\r
-                </reference>\r
-                <clade>\r
-                  <name>Dikarya &amp; Mucoromycotina &amp; Kickxellomycotina &amp; Blastocladiomycota &amp; Chytridiomycota &amp; Neocallimastigomycota</name>\r
-                  <clade>\r
-                    <name>Dikarya &amp; Mucoromycotina &amp; Kickxellomycotina &amp; Blastocladiomycota &amp; Chytridiomycota</name>\r
-                    <clade>\r
-                      <name>Dikarya &amp; Mucoromycotina &amp; Kickxellomycotina &amp; Blastocladiomycota</name>\r
-                      <clade>\r
-                        <name>Dikarya &amp; Mucoromycotina &amp; Kickxellomycotina</name>\r
-                        <clade>\r
-                          <name>Dikarya &amp; Mucoromycotina</name>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">451864</id>\r
-                              <scientific_name>Dikarya</scientific_name>\r
-                              <rank>subkingdom</rank>\r
-                            </taxonomy>\r
-                            <reference doi="10.1038/nature05110">\r
-                            </reference>\r
-                            <reference>\r
-                            </reference>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">4890</id>\r
-                                <scientific_name>Ascomycota</scientific_name>\r
-                                <rank>phylum</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <name>Pezizomycotina &amp; Saccharomycetales</name>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">147538</id>\r
-                                    <scientific_name>Pezizomycotina</scientific_name>\r
-                                    <synonym>Euascomycota</synonym>\r
-                                    <rank>subphylum</rank>\r
-                                  </taxonomy>\r
-                                  <reference doi="0.3852/mycologia.98.6.1018">\r
-                                    <desc>A five-gene phylogeny of Pezizomycotina</desc>\r
-                                  </reference>\r
-                                  <reference>\r
-                                  </reference>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">716546</id>\r
-                                      <scientific_name>Leotiomyceta</scientific_name>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <name>Sordariomyceta &amp; Dothideomycetes &amp; Trichocomaceae &amp; Lecanoromycetes</name>\r
-                                      <clade>\r
-                                        <name>Sordariomyceta &amp; Dothideomycetes &amp; Lecanoromycetes</name>\r
-                                        <clade>\r
-                                          <name>Sordariomyceta &amp; Lecanoromycetes</name>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">715989</id>\r
-                                              <scientific_name>Sordariomyceta</scientific_name>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">147550</id>\r
-                                                <scientific_name>Sordariomycetes</scientific_name>\r
-                                                <rank>class</rank>\r
-                                              </taxonomy>\r
-                                              <clade>\r
-                                                <name>Magnaporthales &amp; Hypocreales</name>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">5125</id>\r
-                                                    <scientific_name>Hypocreales</scientific_name>\r
-                                                    <rank>order</rank>\r
-                                                  </taxonomy>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">398408</id>\r
-                                                      <code>AALXX</code>\r
-                                                      <scientific_name>Acremonium alcalophilum</scientific_name>\r
-                                                      <rank>species</rank>\r
-                                                      <uri>http://genome.jgi-psf.org/public/Acral1_c3a/Acral1.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">229533</id>\r
-                                                      <code>GIBZE</code>\r
-                                                      <scientific_name>Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)</scientific_name>\r
-                                                      <common_name>Wheat head blight fungus</common_name>\r
-                                                      <synonym>Fusarium graminearum</synonym>\r
-                                                      <synonym>Gibberella zeae PH-1</synonym>\r
-                                                      <rank>strain</rank>\r
-                                                      <uri>http://www.apsnet.org/publications/apsnetfeatures/PublishingImages/1999%20Features/Fusarium02sm.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">413071</id>\r
-                                                      <code>HYPVG</code>\r
-                                                      <scientific_name>Hypocrea virens (strain Gv29-8 / FGSC 10586)</scientific_name>\r
-                                                      <common_name>Gliocladium virens</common_name>\r
-                                                      <synonym>Trichoderma virens</synonym>\r
-                                                      <synonym>Gliocladium flavofuscum</synonym>\r
-                                                      <synonym>Trichoderma virens Gv29-8</synonym>\r
-                                                      <synonym>Gliocladium virens</synonym>\r
-                                                      <rank>strain</rank>\r
-                                                      <uri>http://www.ars.usda.gov/images/docs/10920_11114/Stroma1.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">148305</id>\r
-                                                    <code>MAGGR</code>\r
-                                                    <scientific_name>Magnaporthe grisea</scientific_name>\r
-                                                    <common_name>Rice blast fungus</common_name>\r
-                                                    <synonym>Pyricularia grisea</synonym>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://www.forestryimages.org/images/768x512/5369002.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">5139</id>\r
-                                                  <scientific_name>Sordariales</scientific_name>\r
-                                                  <rank>order</rank>\r
-                                                </taxonomy>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">35718</id>\r
-                                                    <scientific_name>Chaetomiaceae</scientific_name>\r
-                                                    <rank>family</rank>\r
-                                                  </taxonomy>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">35719</id>\r
-                                                      <scientific_name>Thielavia</scientific_name>\r
-                                                      <rank>genus</rank>\r
-                                                    </taxonomy>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">573729</id>\r
-                                                        <code>THIHA</code>\r
-                                                        <scientific_name>Thielavia heterothallica (strain ATCC 42464 / BCRC 31852 / DSM 1799)</scientific_name>\r
-                                                        <authority>(Apinis) Oorschot 1977</authority>\r
-                                                        <synonym>Sporotrichum thermophilum</synonym>\r
-                                                        <synonym>Myceliophthora thermophila</synonym>\r
-                                                        <rank>species</rank>\r
-                                                        <uri>http://genome.jgi-psf.org/public/Spoth2/Spoth0.jpg</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">578455</id>\r
-                                                        <code>THITE</code>\r
-                                                        <scientific_name>Thielavia terrestris (strain ATCC 38088 / NRRL 8126)</scientific_name>\r
-                                                        <synonym>Acremonium alabamense</synonym>\r
-                                                        <synonym>Thielavia terrestris NRRL 8126</synonym>\r
-                                                        <uri>http://genome.jgi-psf.org/public/Thite2/Thite1.jpg</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">306901</id>\r
-                                                      <code>CHAGB</code>\r
-                                                      <scientific_name>Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)</scientific_name>\r
-                                                      <authority>Kunze 1817</authority>\r
-                                                      <common_name>Soil fungus</common_name>\r
-                                                      <rank>strain</rank>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">367110</id>\r
-                                                    <code>NEUCR</code>\r
-                                                    <scientific_name>Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)</scientific_name>\r
-                                                    <rank>strain</rank>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">147548</id>\r
-                                                <scientific_name>Leotiomycetes</scientific_name>\r
-                                                <rank>class</rank>\r
-                                              </taxonomy>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">28983</id>\r
-                                                  <scientific_name>Sclerotiniaceae</scientific_name>\r
-                                                  <rank>family</rank>\r
-                                                </taxonomy>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">999810</id>\r
-                                                    <code>BOTF4</code>\r
-                                                    <scientific_name>Botryotinia fuckeliana (strain T4)</scientific_name>\r
-                                                    <common_name>Noble rot fungus</common_name>\r
-                                                    <synonym>Botrytis cinerea</synonym>\r
-                                                    <rank>strain</rank>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">665079</id>\r
-                                                    <code>SCLS1</code>\r
-                                                    <scientific_name>Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)</scientific_name>\r
-                                                    <common_name>White mold</common_name>\r
-                                                    <synonym>Whetzelinia sclerotiorum</synonym>\r
-                                                    <rank>strain</rank>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">78148</id>\r
-                                                  <scientific_name>Oidiodendron maius</scientific_name>\r
-                                                  <rank>species</rank>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                            </clade>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">388435</id>\r
-                                              <scientific_name>Lecanoromycetidae</scientific_name>\r
-                                              <rank>subclass</rank>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">27339</id>\r
-                                                <scientific_name>Cladonia grayi</scientific_name>\r
-                                                <synonym>Cladonia grayi Merr</synonym>\r
-                                                <rank>species</rank>\r
-                                                <uri>http://upload.wikimedia.org/wikipedia/commons/b/b6/Cladonia_grayi-11.jpg</uri>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">107463</id>\r
-                                                <scientific_name>Xanthoria parietina</scientific_name>\r
-                                                <rank>species</rank>\r
-                                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/7/70/Xanthoria_parietina_%2806_03_31%29.jpg/800px-Xanthoria_parietina_%2806_03_31%29.jpg</uri>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">147541</id>\r
-                                            <scientific_name>Dothideomycetes</scientific_name>\r
-                                            <common_name>bitunicate ascomycetes</common_name>\r
-                                            <rank>class</rank>\r
-                                          </taxonomy>\r
-                                          <reference doi="10.3114/sim.2009.64.01">\r
-                                            <desc>A class-wide phylogenetic assessment of Dothideomycetes</desc>\r
-                                          </reference>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">451867</id>\r
-                                              <scientific_name>Dothideomycetidae</scientific_name>\r
-                                              <rank>subclass</rank>\r
-                                            </taxonomy>\r
-                                            <reference doi="10.3852/mycologia.98.6.1041">\r
-                                              <desc>A multigene phylogeny of the Dothideomycetes using four nuclear loci</desc>\r
-                                            </reference>\r
-                                            <reference>\r
-                                            </reference>\r
-                                            <reference>\r
-                                            </reference>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">134362</id>\r
-                                                <scientific_name>Capnodiales</scientific_name>\r
-                                                <rank>order</rank>\r
-                                              </taxonomy>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">41254</id>\r
-                                                  <scientific_name>Mycosphaerella</scientific_name>\r
-                                                  <rank>genus</rank>\r
-                                                </taxonomy>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">83344</id>\r
-                                                    <code>PFIXX</code>\r
-                                                    <scientific_name>Pseudocercospora fijiensis</scientific_name>\r
-                                                    <synonym>Mycosphaerella fijiensis</synonym>\r
-                                                    <rank>species</rank>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">336722</id>\r
-                                                    <code>MYCGM</code>\r
-                                                    <scientific_name>Mycosphaerella graminicola (strain CBS 115943 / IPO323)</scientific_name>\r
-                                                    <common_name>Speckled leaf blotch fungus</common_name>\r
-                                                    <synonym>Zymoseptoria tritici IPO323</synonym>\r
-                                                    <synonym>Mycosphaerella graminicola IPO323</synonym>\r
-                                                    <synonym>Septoria tritici</synonym>\r
-                                                    <rank>strain</rank>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">64363</id>\r
-                                                    <code>MYCPJ</code>\r
-                                                    <scientific_name>Mycosphaerella pini</scientific_name>\r
-                                                    <common_name>Red band needle blight disease fungus</common_name>\r
-                                                    <synonym>Dothistroma septosporum</synonym>\r
-                                                    <synonym>Dothistroma pini</synonym>\r
-                                                    <rank>species</rank>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">692275</id>\r
-                                                    <code>MPSXX</code>\r
-                                                    <scientific_name>Mycosphaerella populorum SO2202</scientific_name>\r
-                                                    <synonym>Septoria musiva SO2202</synonym>\r
-                                                    <uri>http://genome.jgi-psf.org/public/Sepmu1/Septoria-musiva-colony-abundantly-sporulating-2.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">430998</id>\r
-                                                  <code>BCOXX</code>\r
-                                                  <scientific_name>Baudoinia compniacensis</scientific_name>\r
-                                                  <common_name>Angels&apos; Share fungus</common_name>\r
-                                                  <synonym>Torula compniacensis</synonym>\r
-                                                  <rank>species</rank>\r
-                                                  <uri>http://www.botanicalgarden.ubc.ca/potd/images/2011/baudoinia-compniacensis2.jpg</uri>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">5580</id>\r
-                                                <code>AURPU</code>\r
-                                                <scientific_name>Aureobasidium pullulans</scientific_name>\r
-                                                <common_name>Black yeast</common_name>\r
-                                                <synonym>Pullularia pullulans</synonym>\r
-                                                <rank>species</rank>\r
-                                              </taxonomy>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">178873</id>\r
-                                                  <code>APPXX</code>\r
-                                                  <scientific_name>Aureobasidium pullulans var. pullulans</scientific_name>\r
-                                                  <rank>varietas</rank>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">46634</id>\r
-                                                  <code>APMXX</code>\r
-                                                  <scientific_name>Aureobasidium pullulans var. melanogenum</scientific_name>\r
-                                                  <rank>varietas</rank>\r
-                                                  <uri>http://genome.jgi-psf.org/public/Aurpu_var_mel1/Aurpu_var_mel1_P1010309ApM+(2).JPG</uri>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">1042127</id>\r
-                                                  <code>APSXX</code>\r
-                                                  <scientific_name>Aureobasidium pullulans var. subglaciale</scientific_name>\r
-                                                  <synonym>Aureobasidium pullulans var. nov. PZ-2008</synonym>\r
-                                                  <rank>varietas</rank>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                            </clade>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">715340</id>\r
-                                              <scientific_name>Pleosporineae</scientific_name>\r
-                                              <rank>suborder</rank>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">28556</id>\r
-                                                <scientific_name>Pleosporaceae</scientific_name>\r
-                                                <rank>family</rank>\r
-                                              </taxonomy>\r
-                                              <clade>\r
-                                                <name>Cochliobolus &amp; Setosphaeria</name>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">45130</id>\r
-                                                    <code>COCSA</code>\r
-                                                    <scientific_name>Cochliobolus sativus</scientific_name>\r
-                                                    <synonym>Bipolaris sorokiniana</synonym>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://www.plantmanagementnetwork.org/pub/php/diagnosticguide/2003/rootrot/image/mathre6sm.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">93612</id>\r
-                                                    <code>SETTU</code>\r
-                                                    <scientific_name>Setosphaeria turcica</scientific_name>\r
-                                                    <authority>(Luttr.) K.J. Leonard &amp; Suggs, (1974)</authority>\r
-                                                    <common_name>Northern corn leaf blight disease fungus</common_name>\r
-                                                    <synonym>Exserohilum turcicum</synonym>\r
-                                                    <synonym>Helminthosporium turcicum</synonym>\r
-                                                    <rank>species</rank>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">426418</id>\r
-                                                  <code>PYRTR</code>\r
-                                                  <scientific_name>Pyrenophora tritici-repentis (strain Pt-1C-BFP)</scientific_name>\r
-                                                  <common_name>Wheat tan spot fungus</common_name>\r
-                                                  <synonym>Drechslera tritici-repentis</synonym>\r
-                                                  <rank>strain</rank>\r
-                                                </taxonomy>\r
-                                              </clade>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">321614</id>\r
-                                                <code>PHANO</code>\r
-                                                <scientific_name>Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)</scientific_name>\r
-                                                <common_name>Glume blotch fungus</common_name>\r
-                                                <synonym>Septoria nodorum</synonym>\r
-                                                <rank>strain</rank>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                          </clade>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">28568</id>\r
-                                          <scientific_name>Trichocomaceae</scientific_name>\r
-                                          <rank>family</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">5052</id>\r
-                                            <scientific_name>Aspergillus</scientific_name>\r
-                                            <rank>genus</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">332952</id>\r
-                                              <code>ASPFN</code>\r
-                                              <scientific_name>Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)</scientific_name>\r
-                                              <synonym>Aspergillus flavus NRRL3357</synonym>\r
-                                              <rank>strain</rank>\r
-                                              <uri>http://www.jhunewsletter.com/wp-content/uploads/2012/11/b8fungi.jpeg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">425011</id>\r
-                                              <code>ASPNC</code>\r
-                                              <scientific_name>Aspergillus niger (strain CBS 513.88 / FGSC A1513)</scientific_name>\r
-                                              <synonym>Aspergillus niger CBS 513.88</synonym>\r
-                                              <rank>strain</rank>\r
-                                              <uri>http://www.vetmed.wisc.edu/students/vetmycology/15.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">344612</id>\r
-                                              <code>ASPCL</code>\r
-                                              <scientific_name>Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)</scientific_name>\r
-                                              <synonym>Aspergillus clavatus NRRL 1</synonym>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <name>Neosartorya &amp; Emericella</name>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">227321</id>\r
-                                              <code>EMENI</code>\r
-                                              <scientific_name>Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)</scientific_name>\r
-                                              <authority>Vuill. 1927</authority>\r
-                                              <synonym>Aspergillus nidulans</synonym>\r
-                                              <rank>strain</rank>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">331117</id>\r
-                                              <code>NEOFI</code>\r
-                                              <scientific_name>Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)</scientific_name>\r
-                                              <synonym>Aspergillus fischerianus</synonym>\r
-                                              <rank>strain</rank>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">33183</id>\r
-                                        <scientific_name>Onygenales</scientific_name>\r
-                                        <rank>order</rank>\r
-                                      </taxonomy>\r
-                                      <reference>\r
-                                        <desc>The Ajellomycetaceae, a new family of vertebrate-associated Onygenales</desc>\r
-                                      </reference>\r
-                                      <reference>\r
-                                      </reference>\r
-                                      <clade>\r
-                                        <name>mitosporic Onygenales &amp; Onygenaceae</name>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">246410</id>\r
-                                            <code>COCIM</code>\r
-                                            <scientific_name>Coccidioides immitis (strain RS)</scientific_name>\r
-                                            <common_name>Valley fever fungus</common_name>\r
-                                            <synonym>Coccidioides immitis RS</synonym>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">336963</id>\r
-                                            <code>UNCRE</code>\r
-                                            <scientific_name>Uncinocarpus reesii (strain UAMH 1704)</scientific_name>\r
-                                            <rank>strain</rank>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">447093</id>\r
-                                          <code>AJECG</code>\r
-                                          <scientific_name>Ajellomyces capsulata (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432)</scientific_name>\r
-                                          <common_name>Darling&apos;s disease fungus</common_name>\r
-                                          <synonym>Histoplasma capsulatum</synonym>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">656061</id>\r
-                                      <code>TUBMM</code>\r
-                                      <scientific_name>Tuber melanosporum (strain Mel28)</scientific_name>\r
-                                      <common_name>Perigord black truffle</common_name>\r
-                                      <synonym>Tuber melanosporum Mel28</synonym>\r
-                                      <rank>strain</rank>\r
-                                      <uri>http://www.trufamania.com/trufas/Tuber%20melanosporum02.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">4892</id>\r
-                                    <scientific_name>Saccharomycetales</scientific_name>\r
-                                    <common_name>budding yeasts</common_name>\r
-                                    <rank>order</rank>\r
-                                  </taxonomy>\r
-                                  <reference doi="10.1186/1471-2148-6-99">\r
-                                    <desc>A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis</desc>\r
-                                  </reference>\r
-                                  <reference>\r
-                                  </reference>\r
-                                  <clade>\r
-                                    <name>mitosporic Saccharomycetales &amp; Debaryomycetaceae &amp; Saccharomycetaceae</name>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">4893</id>\r
-                                        <scientific_name>Saccharomycetaceae</scientific_name>\r
-                                        <rank>family</rank>\r
-                                      </taxonomy>\r
-                                      <clade>\r
-                                        <name>Naumovozyma &amp; Saccharomyces</name>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">1064592</id>\r
-                                            <code>NAUCC</code>\r
-                                            <scientific_name>Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630)</scientific_name>\r
-                                            <common_name>Yeast</common_name>\r
-                                            <synonym>Saccharomyces castellii</synonym>\r
-                                            <rank>strain</rank>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">559292</id>\r
-                                            <code>YEAST</code>\r
-                                            <scientific_name>Saccharomyces cerevisiae (strain ATCC 204508 / S288c)</scientific_name>\r
-                                            <common_name>Baker&apos;s yeast</common_name>\r
-                                            <rank>strain</rank>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <name>Eremothecium &amp; Kluyveromyces</name>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">284590</id>\r
-                                            <code>KLULA</code>\r
-                                            <scientific_name>Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)</scientific_name>\r
-                                            <common_name>Yeast</common_name>\r
-                                            <synonym>Candida sphaerica</synonym>\r
-                                            <synonym>Kluyveromyces lactis NRRL Y-1140</synonym>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">284811</id>\r
-                                            <code>ASHGO</code>\r
-                                            <scientific_name>Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)</scientific_name>\r
-                                            <common_name>Yeast</common_name>\r
-                                            <synonym>Eremothecium gossypii</synonym>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <name>Debaryomyces &amp; Candida</name>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">5475</id>\r
-                                          <scientific_name>Candida</scientific_name>\r
-                                          <synonym>Torulopsis</synonym>\r
-                                          <rank>genus</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">237561</id>\r
-                                            <code>CANAL</code>\r
-                                            <scientific_name>Candida albicans (strain SC5314 / ATCC MYA-2876)</scientific_name>\r
-                                            <common_name>Yeast</common_name>\r
-                                            <rank>strain</rank>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">294747</id>\r
-                                            <code>CANTT</code>\r
-                                            <scientific_name>Candida tropicalis (strain ATCC MYA-3404 / T1)</scientific_name>\r
-                                            <common_name>Yeast</common_name>\r
-                                            <rank>strain</rank>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">284592</id>\r
-                                          <code>DEBHA</code>\r
-                                          <scientific_name>Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)</scientific_name>\r
-                                          <common_name>Yeast</common_name>\r
-                                          <synonym>Torulaspora hansenii</synonym>\r
-                                          <synonym>Debaryomyces hansenii CBS767</synonym>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">284591</id>\r
-                                      <code>YARLI</code>\r
-                                      <scientific_name>Yarrowia lipolytica (strain CLIB 122 / E 150)</scientific_name>\r
-                                      <common_name>Yeast</common_name>\r
-                                      <synonym>Candida lipolytica</synonym>\r
-                                      <rank>strain</rank>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">451866</id>\r
-                                  <scientific_name>Taphrinomycotina</scientific_name>\r
-                                  <rank>subphylum</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <name>Pneumocystidomycetes &amp; Schizosaccharomycetes</name>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">4895</id>\r
-                                      <scientific_name>Schizosaccharomyces</scientific_name>\r
-                                      <rank>genus</rank>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">402676</id>\r
-                                        <code>SCHJY</code>\r
-                                        <scientific_name>Schizosaccharomyces japonicus (strain yFS275 / FY16936)</scientific_name>\r
-                                        <common_name>Fission yeast</common_name>\r
-                                        <rank>strain</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">4899</id>\r
-                                        <code>SCHOT</code>\r
-                                        <scientific_name>Schizosaccharomyces octosporus</scientific_name>\r
-                                        <common_name>Fission yeast</common_name>\r
-                                        <rank>species</rank>\r
-                                        <uri>http://www.dipbot.unict.it/sistematica/Immagini/12002.JPG</uri>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">284812</id>\r
-                                        <code>SCHPO</code>\r
-                                        <scientific_name>Schizosaccharomyces pombe (strain 972 / ATCC 24843)</scientific_name>\r
-                                        <common_name>Fission yeast</common_name>\r
-                                        <rank>strain</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">4754</id>\r
-                                      <code>PNECA</code>\r
-                                      <scientific_name>Pneumocystis carinii</scientific_name>\r
-                                      <rank>species</rank>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">5606</id>\r
-                                    <scientific_name>Saitoella complicata</scientific_name>\r
-                                    <rank>species</rank>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">5204</id>\r
-                                <scientific_name>Basidiomycota</scientific_name>\r
-                                <rank>phylum</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <name>Agaricomycotina &amp; Ustilaginomycotina &amp; Pucciniomycotina</name>\r
-                                <clade>\r
-                                  <name>Agaricomycotina &amp; Ustilaginomycotina</name>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">5302</id>\r
-                                      <scientific_name>Agaricomycotina</scientific_name>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">155619</id>\r
-                                        <scientific_name>Homobasidiomycetes</scientific_name>\r
-                                        <rank>class</rank>\r
-                                      </taxonomy>\r
-                                      <reference doi="10.1098/rspb.2002.2123">\r
-                                        <desc>Evolution of complex fruiting–body morphologies in homobasidiomycetes</desc>\r
-                                      </reference>\r
-                                      <clade>\r
-                                        <name>Agaricomycetidae &amp; Gloeophyllum &amp; Aphyllophorales</name>\r
-                                        <clade>\r
-                                          <name>Agaricomycetidae &amp; Gloeophyllum</name>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">452333</id>\r
-                                              <scientific_name>Agaricomycetidae</scientific_name>\r
-                                              <rank>subclass</rank>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <name>Agaricales &amp; Boletales</name>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">5338</id>\r
-                                                  <scientific_name>Agaricales</scientific_name>\r
-                                                  <rank>order</rank>\r
-                                                </taxonomy>\r
-                                                <clade>\r
-                                                  <name>Agaricus &amp; Coprinopsis &amp; Laccaria &amp; Pleurotus</name>\r
-                                                  <clade>\r
-                                                    <name>Agaricus &amp; Coprinopsis &amp; Laccaria</name>\r
-                                                    <clade>\r
-                                                      <name>Agaricus &amp; Coprinopsis</name>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">597362</id>\r
-                                                          <code>AGABU</code>\r
-                                                          <scientific_name>Agaricus bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)</scientific_name>\r
-                                                          <common_name>White button mushroom</common_name>\r
-                                                          <synonym>Agaricus bisporus var. burnettii JB137-S8</synonym>\r
-                                                          <uri>http://www.mykoweb.com/CAF/photos/Agaricus_bisporus(fs-03).jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                      <clade>\r
-                                                        <taxonomy>\r
-                                                          <id provider="uniprot">5346</id>\r
-                                                          <code>COPC7</code>\r
-                                                          <scientific_name>Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)</scientific_name>\r
-                                                          <common_name>Inky cap fungus</common_name>\r
-                                                          <synonym>Hormographiella aspergillata</synonym>\r
-                                                          <rank>strain</rank>\r
-                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/e/e9/Coprinopsis.cinerea.-.lindsey.jpg</uri>\r
-                                                        </taxonomy>\r
-                                                      </clade>\r
-                                                    </clade>\r
-                                                    <clade>\r
-                                                      <taxonomy>\r
-                                                        <id provider="uniprot">486041</id>\r
-                                                        <code>LACBS</code>\r
-                                                        <scientific_name>Laccaria bicolor</scientific_name>\r
-                                                        <common_name>Bicoloured deceiver</common_name>\r
-                                                        <synonym>Laccaria laccata var. bicolor</synonym>\r
-                                                        <synonym>Laccaria bicolor S238N-H82</synonym>\r
-                                                        <rank>strain</rank>\r
-                                                        <uri>http://botit.botany.wisc.edu/toms_fungi/images/L_bicolor_NM.JPG</uri>\r
-                                                      </taxonomy>\r
-                                                    </clade>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">206324</id>\r
-                                                      <scientific_name>Gymnopus luxurians</scientific_name>\r
-                                                      <rank>species</rank>\r
-                                                      <uri>http://www.mushroomexpert.com/images/kuo3/gymnopus_luxurians_02.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">5322</id>\r
-                                                    <code>PLEOS</code>\r
-                                                    <scientific_name>Pleurotus ostreatus</scientific_name>\r
-                                                    <common_name>Oyster mushroom</common_name>\r
-                                                    <synonym>White-rot fungus</synonym>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://botit.botany.wisc.edu/toms_fungi/images/post1.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <taxonomy>\r
-                                                  <id provider="uniprot">68889</id>\r
-                                                  <scientific_name>Boletales</scientific_name>\r
-                                                  <synonym>Melanogastrales</synonym>\r
-                                                  <synonym>Sclerodermatales</synonym>\r
-                                                  <rank>order</rank>\r
-                                                </taxonomy>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">227334</id>\r
-                                                    <scientific_name>Coniophorineae</scientific_name>\r
-                                                    <rank>suborder</rank>\r
-                                                  </taxonomy>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">80637</id>\r
-                                                      <code>CPUXX</code>\r
-                                                      <scientific_name>Coniophora puteana</scientific_name>\r
-                                                      <authority>Schum. ex Fries</authority>\r
-                                                      <common_name>cellar fungus</common_name>\r
-                                                      <rank>species</rank>\r
-                                                      <uri>http://genome.jgi-psf.org/public/Conpu1/P1240066_dp.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                  <clade>\r
-                                                    <taxonomy>\r
-                                                      <id provider="uniprot">578457</id>\r
-                                                      <code>SERL9</code>\r
-                                                      <scientific_name>Serpula lacrymans var. lacrymans (strain S7.9)</scientific_name>\r
-                                                      <common_name>Dry rot fungus</common_name>\r
-                                                      <uri>http://www.anbg.gov.au/fungi/images/0160.jpg</uri>\r
-                                                    </taxonomy>\r
-                                                  </clade>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">388859</id>\r
-                                                    <scientific_name>Hydnomerulius pinastri</scientific_name>\r
-                                                    <common_name>Spiny dry rot fungus</common_name>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://genome.jgi.doe.gov/public/Hydpi1/Hydnomerulius_pinastri.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">202697</id>\r
-                                                <code>JARXX</code>\r
-                                                <scientific_name>Jaapia argillacea</scientific_name>\r
-                                                <rank>species</rank>\r
-                                                <uri>http://mycor.nancy.inra.fr/blogGenomes/wp-content/uploads/2012/08/IMG_21261.jpg</uri>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">104355</id>\r
-                                              <code>GLOTR</code>\r
-                                              <scientific_name>Gloeophyllum trabeum</scientific_name>\r
-                                              <common_name>Brown rot fungus</common_name>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://www.commanster.eu/commanster/Mushrooms/Basidio/SpBasidio/Gloeophyllum.trabeum.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">5303</id>\r
-                                            <scientific_name>Aphyllophorales</scientific_name>\r
-                                            <authority>Gäum. (1926)</authority>\r
-                                            <common_name>Shelf Fungi</common_name>\r
-                                            <synonym>Polyporales</synonym>\r
-                                            <rank>order</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">83233</id>\r
-                                              <scientific_name>Coriolaceae</scientific_name>\r
-                                              <rank>family</rank>\r
-                                            </taxonomy>\r
-                                            <reference doi="10.1017/S1477200005001623">\r
-                                              <desc>The phylogenetic distribution of resupinate forms across the major clades of mushroom-forming fungi (Homobasidiomycetes)</desc>\r
-                                            </reference>\r
-                                            <reference>\r
-                                            </reference>\r
-                                            <reference>\r
-                                            </reference>\r
-                                            <clade>\r
-                                              <name>Postia &amp; Fomitopsis &amp; Wolfiporia &amp; Trametes</name>\r
-                                              <clade>\r
-                                                <name>Antrodia clade</name>\r
-                                                <taxonomy>\r
-                                                  <common_name>Antrodia clade</common_name>\r
-                                                </taxonomy>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">40483</id>\r
-                                                    <code>FPIXX</code>\r
-                                                    <scientific_name>Fomitopsis pinicola</scientific_name>\r
-                                                    <authority>(Swartz) P. Karsten</authority>\r
-                                                    <common_name>Red banded polypore</common_name>\r
-                                                    <synonym>Fomes pinicola</synonym>\r
-                                                    <synonym>Boletus pinicola</synonym>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://www.mykoweb.com/CAF/photos/Fomitopsis_pinicola(mgw-02).jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">104341</id>\r
-                                                    <code>PPLXX</code>\r
-                                                    <scientific_name>Postia placenta</scientific_name>\r
-                                                    <synonym>Rhodonia placenta</synonym>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://www.commanster.eu/commanster/Mushrooms/Polypore/SuPolypore/Postia.placenta.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                              <clade>\r
-                                                <name>core polyporoid clade</name>\r
-                                                <taxonomy>\r
-                                                  <common_name>core polyporoid clade</common_name>\r
-                                                </taxonomy>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">5325</id>\r
-                                                    <code>TRAVE</code>\r
-                                                    <scientific_name>Trametes versicolor</scientific_name>\r
-                                                    <authority>(L.) Lloyd 1921</authority>\r
-                                                    <common_name>White-rot fungus</common_name>\r
-                                                    <synonym>Coriolus versicolor</synonym>\r
-                                                    <synonym>Bjerkandera versicolor</synonym>\r
-                                                    <rank>species</rank>\r
-                                                    <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0304/0521.jpeg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                                <clade>\r
-                                                  <taxonomy>\r
-                                                    <id provider="uniprot">742152</id>\r
-                                                    <code>WOLCO</code>\r
-                                                    <scientific_name>Wolfiporia cocos (strain MD-104)</scientific_name>\r
-                                                    <common_name>Brown rot fungus</common_name>\r
-                                                    <synonym>Wolfiporia cocos MD-104 SS10</synonym>\r
-                                                    <uri>http://genome.jgi-psf.org/public/Wolco1/W_cocos_CA-b1.jpg</uri>\r
-                                                  </taxonomy>\r
-                                                </clade>\r
-                                              </clade>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">42742</id>\r
-                                                <code>CERSU</code>\r
-                                                <scientific_name>Ceriporiopsis subvermispora</scientific_name>\r
-                                                <rank>species</rank>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">732165</id>\r
-                                              <code>DICSQ</code>\r
-                                              <scientific_name>Dichomitus squalens (strain LYAD-421)</scientific_name>\r
-                                              <common_name>Western red white-rot fungus</common_name>\r
-                                              <synonym>Dichomitus squalens LYAD-421 SS1</synonym>\r
-                                              <uri>http://www.fs.fed.us/r3/resources/health/field-guide/images/large/sds-f199-large.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">13563</id>\r
-                                          <code>HETAN</code>\r
-                                          <scientific_name>Heterobasidion annosum</scientific_name>\r
-                                          <common_name>Root rot fungus</common_name>\r
-                                          <rank>species</rank>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">5215</id>\r
-                                        <scientific_name>Tremellaceae</scientific_name>\r
-                                        <rank>family</rank>\r
-                                      </taxonomy>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">5207</id>\r
-                                          <code>CRYNE</code>\r
-                                          <scientific_name>Cryptococcus neoformans</scientific_name>\r
-                                          <synonym>Filobasidiella neoformans</synonym>\r
-                                          <rank>species</rank>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="eol">1029985</id>\r
-                                          <code>TREME</code>\r
-                                          <scientific_name>Tremella mesenterica</scientific_name>\r
-                                          <authority>Pers. 1800</authority>\r
-                                          <common_name>Jelly fungus</common_name>\r
-                                          <synonym>Yellow Brain</synonym>\r
-                                          <synonym>Tremella lutescens</synonym>\r
-                                          <rank>species</rank>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">452284</id>\r
-                                      <scientific_name>Ustilaginomycotina</scientific_name>\r
-                                      <rank>subphylum</rank>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">425265</id>\r
-                                        <code>MALGO</code>\r
-                                        <scientific_name>Malassezia globosa (strain ATCC MYA-4612 / CBS 7966)</scientific_name>\r
-                                        <common_name>Dandruff-associated fungus</common_name>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">237631</id>\r
-                                        <code>USTMA</code>\r
-                                        <scientific_name>Ustilago maydis (strain 521 / FGSC 9021)</scientific_name>\r
-                                        <common_name>Corn smut fungus</common_name>\r
-                                        <rank>species</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">29000</id>\r
-                                    <scientific_name>Pucciniomycotina</scientific_name>\r
-                                    <rank>subphylum</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">5258</id>\r
-                                      <scientific_name>Pucciniales</scientific_name>\r
-                                      <common_name>rusts</common_name>\r
-                                      <rank>order</rank>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">747676</id>\r
-                                        <code>MELLP</code>\r
-                                        <scientific_name>Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7)</scientific_name>\r
-                                        <authority>Kleb. 1902</authority>\r
-                                        <common_name>Poplar leaf rust fungus</common_name>\r
-                                        <synonym>Melampsora larici-populina 98AG31</synonym>\r
-                                        <synonym>Melampsora laricis-populina 98AG31</synonym>\r
-                                        <rank>strain</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">5297</id>\r
-                                        <code>PUCGR</code>\r
-                                        <scientific_name>Puccinia graminis</scientific_name>\r
-                                        <authority>Pers. 1794</authority>\r
-                                        <common_name>Black stem rust fungus</common_name>\r
-                                        <rank>species</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">89013</id>\r
-                                      <scientific_name>mitosporic Sporidiobolales</scientific_name>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">29898</id>\r
-                                        <code>RHOGR</code>\r
-                                        <scientific_name>Rhodotorula graminis</scientific_name>\r
-                                        <common_name>Yeast</common_name>\r
-                                        <rank>species</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">40563</id>\r
-                                        <code>SPORO</code>\r
-                                        <scientific_name>Sporobolomyces roseus</scientific_name>\r
-                                        <authority>Kluyver &amp; C. B. Niel 1924</authority>\r
-                                        <rank>species</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">671144</id>\r
-                                  <code>WALSC</code>\r
-                                  <scientific_name>Wallemia sebi (strain ATCC MYA-4683 / CBS 633.66)</scientific_name>\r
-                                  <rank>strain</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">451507</id>\r
-                              <scientific_name>Mucoromycotina</scientific_name>\r
-                              <rank>subphylum</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">34489</id>\r
-                                <scientific_name>Mucoraceae</scientific_name>\r
-                                <rank>family</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">36080</id>\r
-                                  <code>MUCCI</code>\r
-                                  <scientific_name>Mucor circinelloides</scientific_name>\r
-                                  <synonym>Mucor griseo-roseus</synonym>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">4837</id>\r
-                                  <code>PHYBL</code>\r
-                                  <scientific_name>Phycomyces blakesleeanus</scientific_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">64495</id>\r
-                                  <code>RHIOR</code>\r
-                                  <scientific_name>Rhizopus oryzae</scientific_name>\r
-                                  <common_name>Mucormycosis agent</common_name>\r
-                                  <synonym>Rhizopus delemar</synonym>\r
-                                  <synonym>Rhizopus arrhizus var. delemar</synonym>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">1069443</id>\r
-                                <code>MVNXX</code>\r
-                                <scientific_name>Mortierella verticillata NRRL 6337</scientific_name>\r
-                                <rank>species</rank>\r
-                                <uri>http://www.ual.es/GruposInv/myco-ual/galeria17/mortierella.jpg</uri>\r
-                                <uri>http://www.diark.org/img/species_pict/Mortierella_verticillata</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">61392</id>\r
-                            <code>CREXX</code>\r
-                            <scientific_name>Coemansia reversa</scientific_name>\r
-                            <rank>species</rank>\r
-                            <uri>http://genome.jgi.doe.gov/public/Coere1/Coemansia.jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">28583</id>\r
-                          <code>ALLMA</code>\r
-                          <scientific_name>Allomyces macrogynus</scientific_name>\r
-                          <rank>species</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">4761</id>\r
-                        <scientific_name>Chytridiomycota</scientific_name>\r
-                        <common_name>chytrids</common_name>\r
-                        <synonym>Mastigomycotina</synonym>\r
-                        <rank>phylum</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">451435</id>\r
-                          <scientific_name>Chytridiomycetes</scientific_name>\r
-                          <rank>class</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">684364</id>\r
-                            <code>BATDJ</code>\r
-                            <scientific_name>Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211)</scientific_name>\r
-                            <common_name>Frog chytrid fungus</common_name>\r
-                            <rank>strain</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">109760</id>\r
-                            <code>SPIPN</code>\r
-                            <scientific_name>Spizellomyces punctatus</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">1123529</id>\r
-                          <code>GONPR</code>\r
-                          <scientific_name>Gonapodya prolifera</scientific_name>\r
-                          <authority>A. Fisch. 1892</authority>\r
-                          <common_name>Aquatic fungus</common_name>\r
-                          <rank>species</rank>\r
-                          <uri>http://genome.jgi-psf.org/public/Ganpr1/Picture5.jpg</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">73868</id>\r
-                      <code>PIRSE</code>\r
-                      <scientific_name>Piromyces sp. (strain E2)</scientific_name>\r
-                      <rank>species</rank>\r
-                      <uri>http://www.bsu.edu/classes/ruch/msa/barr/4-17.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">6029</id>\r
-                    <scientific_name>Microsporidia</scientific_name>\r
-                    <rank>phylum</rank>\r
-                  </taxonomy>\r
-                  <reference>\r
-                    <desc>Disseminated Infection Caused by Novel Species of Microsporidium, Thailand</desc>\r
-                  </reference>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">6032</id>\r
-                      <scientific_name>Apansporoblastina</scientific_name>\r
-                      <rank>suborder</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">6033</id>\r
-                        <scientific_name>Encephalitozoon</scientific_name>\r
-                        <rank>genus</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">284813</id>\r
-                          <code>ENCCU</code>\r
-                          <scientific_name>Encephalitozoon cuniculi (strain GB-M1)</scientific_name>\r
-                          <common_name>Microsporidian parasite</common_name>\r
-                          <rank>strain</rank>\r
-                          <uri>http://www.nature.com/modpathol/journal/v15/n5/images/3880566f7.jpg</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">907965</id>\r
-                          <code>ENCHA</code>\r
-                          <scientific_name>Encephalitozoon hellem (strain ATCC 50504)</scientific_name>\r
-                          <common_name>Microsporidian parasite</common_name>\r
-                          <rank>strain</rank>\r
-                          <uri>http://ruby.fgcu.edu/courses/davidb/50249/web/Encephalitozoonhellem91.jpg</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <name>Nosematidae &amp; Enterocytozoonidae</name>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">993615</id>\r
-                          <code>VITCO</code>\r
-                          <scientific_name>Vittaforma corneae (strain ATCC 50505)</scientific_name>\r
-                          <common_name>Microsporidian parasite</common_name>\r
-                          <synonym>Nosema corneum</synonym>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">481877</id>\r
-                          <code>ENTBH</code>\r
-                          <scientific_name>Enterocytozoon bieneusi (strain H348)</scientific_name>\r
-                          <common_name>Microsporidian parasite</common_name>\r
-                          <uri>http://www.biolib.cz/IMG/GAL/17310.jpg</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">35232</id>\r
-                      <scientific_name>Pleistophoridae</scientific_name>\r
-                      <rank>family</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">72359</id>\r
-                        <code>TRAHO</code>\r
-                        <scientific_name>Trachipleistophora hominis</scientific_name>\r
-                        <common_name>Microsporidian parasite</common_name>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">948595</id>\r
-                        <code>VAVCU</code>\r
-                        <scientific_name>Vavraia culicis (isolate floridensis)</scientific_name>\r
-                        <common_name>Microsporidian parasite</common_name>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">1003232</id>\r
-                      <code>EDHAE</code>\r
-                      <scientific_name>Edhazardia aedis (strain USNM 41457)</scientific_name>\r
-                      <common_name>Microsporidian parasite</common_name>\r
-                      <uri>http://wwx.inhs.illinois.edu/files/6813/4021/9153/4Edhazardia_aedis.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">1001604</id>\r
-                  <scientific_name>Nucleariidae and Fonticula group</scientific_name>\r
-                </taxonomy>\r
-                <reference doi="10.1093/molbev/msp185">\r
-                  <desc>Phylogeny of the \93Forgotten\94 Cellular Slime Mold, Fonticula alba, Reveals a Key Evolutionary Branch within Opisthokonta</desc>\r
-                </reference>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">691883</id>\r
-                    <code>FALXX</code>\r
-                    <scientific_name>Fonticula alba</scientific_name>\r
-                    <authority>Worley, Raper &amp; Hohl. 1979</authority>\r
-                    <rank>species</rank>\r
-                    <uri>http://mbe.oxfordjournals.org/content/26/12/2699/F2.medium.gif</uri>\r
-                  </taxonomy>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">154970</id>\r
-                    <scientific_name>Nuclearia simplex</scientific_name>\r
-                    <rank>species</rank>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-            </clade>\r
-          </clade>\r
-          <clade>\r
-            <taxonomy>\r
-              <id provider="uniprot">554915</id>\r
-              <scientific_name>Amoebozoa</scientific_name>\r
-            </taxonomy>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">33083</id>\r
-                <scientific_name>Dictyosteliida</scientific_name>\r
-                <common_name>dictyostelid cellular slime molds</common_name>\r
-                <rank>order</rank>\r
-              </taxonomy>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">5782</id>\r
-                  <scientific_name>Dictyostelium</scientific_name>\r
-                  <rank>genus</rank>\r
-                </taxonomy>\r
-                <reference doi="10.1186/1471-2148-11-84">\r
-                  <desc>An expanded phylogeny of social amoebas (Dictyostelia) shows increasing diversity and new morphological patterns</desc>\r
-                </reference>\r
-                <reference>\r
-                </reference>\r
-                <reference>\r
-                </reference>\r
-                <clade>\r
-                  <name>group 4</name>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">44689</id>\r
-                      <code>DICDI</code>\r
-                      <scientific_name>Dictyostelium discoideum</scientific_name>\r
-                      <common_name>Slime mold</common_name>\r
-                      <rank>species</rank>\r
-                      <uri>http://www.tins.ne.jp/~tsukubagec/csm.GIF</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">5786</id>\r
-                      <code>DICPU</code>\r
-                      <scientific_name>Dictyostelium purpureum</scientific_name>\r
-                      <common_name>Slime mold</common_name>\r
-                      <rank>species</rank>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">1054147</id>\r
-                    <code>DICFS</code>\r
-                    <scientific_name>Dictyostelium fasciculatum (strain SH3)</scientific_name>\r
-                    <common_name>Slime mold</common_name>\r
-                    <rank>strain</rank>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">13642</id>\r
-                  <code>POLPA</code>\r
-                  <scientific_name>Polysphondylium pallidum</scientific_name>\r
-                  <common_name>Cellular slime mold</common_name>\r
-                  <rank>species</rank>\r
-                  <uri>http://cosmos.bot.kyoto-u.ac.jp/csm/photos2/Pp8s.jpeg</uri>\r
-                </taxonomy>\r
-              </clade>\r
-            </clade>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">5758</id>\r
-                <scientific_name>Entamoeba</scientific_name>\r
-                <rank>genus</rank>\r
-              </taxonomy>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">5759</id>\r
-                  <code>ENTHI</code>\r
-                  <scientific_name>Entamoeba histolytica</scientific_name>\r
-                  <rank>species</rank>\r
-                  <uri>http://www.dpd.cdc.gov/dpdx/images/ParasiteImages/A-F/Amebiasis/E_histo/Ehistdisp_troph_wtmt2.jpg</uri>\r
-                </taxonomy>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">370354</id>\r
-                  <code>ENTDS</code>\r
-                  <scientific_name>Entamoeba dispar (strain ATCC PRA-260 / SAW760)</scientific_name>\r
-                </taxonomy>\r
-              </clade>\r
-            </clade>\r
-          </clade>\r
-        </clade>\r
-        <clade>\r
-          <name>Bikonta</name>\r
-          <reference doi="10.1099/ijs.0.63216-0">\r
-          </reference>\r
-          <clade>\r
-            <name>Plants+HC+SAR megagroup</name>\r
-            <clade>\r
-              <name>Plants+HC</name>\r
-              <clade>\r
-                <name>Archaeplastida</name>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">33090</id>\r
-                    <scientific_name>Viridiplantae</scientific_name>\r
-                    <common_name>green plants</common_name>\r
-                    <rank>kingdom</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">3193</id>\r
-                      <scientific_name>Embryophyta</scientific_name>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">58023</id>\r
-                        <scientific_name>Tracheophyta</scientific_name>\r
-                        <common_name>vascular plants</common_name>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">58024</id>\r
-                          <scientific_name>Spermatophyta</scientific_name>\r
-                          <common_name>seed plants</common_name>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">3398</id>\r
-                            <scientific_name>Magnoliophyta</scientific_name>\r
-                            <common_name>flowering plants</common_name>\r
-                            <synonym>Angiospermae</synonym>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">71240</id>\r
-                              <scientific_name>eudicotyledons</scientific_name>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">91827</id>\r
-                                <scientific_name>core eudicotyledons</scientific_name>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">71275</id>\r
-                                  <scientific_name>rosids</scientific_name>\r
-                                  <rank>subclass</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <name>fabids &amp; malvids</name>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">91835</id>\r
-                                      <scientific_name>fabids</scientific_name>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <name>Rosales &amp; Cucurbitales &amp; Fabales</name>\r
-                                      <clade>\r
-                                        <name>Rosales &amp; Cucurbitales</name>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">3745</id>\r
-                                            <scientific_name>Rosaceae</scientific_name>\r
-                                            <rank>family</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">57918</id>\r
-                                              <code>FRAVE</code>\r
-                                              <scientific_name>Fragaria vesca</scientific_name>\r
-                                              <common_name>Woodland strawberry</common_name>\r
-                                              <synonym>Fragaria vesca L.</synonym>\r
-                                              <synonym>European strawberry</synonym>\r
-                                              <synonym>alpine strawberry</synonym>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://www.boga.ruhr-uni-bochum.de/html/Fragaria.vesca.ja6.jpg</uri>\r
-                                              <uri>http://caliban.mpiz-koeln.mpg.de/thome/band3/tafel_092_small.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">3760</id>\r
-                                              <code>PRUPE</code>\r
-                                              <scientific_name>Prunus persica</scientific_name>\r
-                                              <common_name>Peach</common_name>\r
-                                              <synonym>Persica vulgaris</synonym>\r
-                                              <synonym>Amygdalus persica</synonym>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://www.mezhenskyjv.narod.ru/foto_sortov/dokaz.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">3659</id>\r
-                                            <code>CUCSA</code>\r
-                                            <scientific_name>Cucumis sativus</scientific_name>\r
-                                            <common_name>Cucumber</common_name>\r
-                                            <rank>species</rank>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">3814</id>\r
-                                          <scientific_name>Papilionoideae</scientific_name>\r
-                                          <rank>subfamily</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">3847</id>\r
-                                            <code>SOYBN</code>\r
-                                            <scientific_name>Glycine max</scientific_name>\r
-                                            <authority>cv. Wye</authority>\r
-                                            <common_name>Soybean</common_name>\r
-                                            <synonym>Glycine hispida</synonym>\r
-                                            <rank>species</rank>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">3880</id>\r
-                                            <code>MEDTR</code>\r
-                                            <scientific_name>Medicago truncatula</scientific_name>\r
-                                            <common_name>Barrel medic</common_name>\r
-                                            <synonym>Medicago tribuloides</synonym>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://crdp.ac-besancon.fr/flore/FABACEAE/photos/medicago_truncatula_30.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">3646</id>\r
-                                        <scientific_name>Malpighiales</scientific_name>\r
-                                        <rank>order</rank>\r
-                                      </taxonomy>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">3977</id>\r
-                                          <scientific_name>Euphorbiaceae</scientific_name>\r
-                                          <rank>family</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">3983</id>\r
-                                            <code>MANES</code>\r
-                                            <scientific_name>Manihot esculenta</scientific_name>\r
-                                            <common_name>Tapioca</common_name>\r
-                                            <synonym>Jatropha manihot</synonym>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://upload.wikimedia.org/wikipedia/commons/9/99/Iwata_kenichi_cassava.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">3988</id>\r
-                                            <code>RICCO</code>\r
-                                            <scientific_name>Ricinus communis</scientific_name>\r
-                                            <common_name>Castor bean</common_name>\r
-                                            <synonym>Ricinus sanguineus</synonym>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://nmorganics.net/wp-content/uploads/2011/09/castor.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">3694</id>\r
-                                          <code>POPTR</code>\r
-                                          <scientific_name>Populus trichocarpa</scientific_name>\r
-                                          <common_name>Western balsam poplar</common_name>\r
-                                          <synonym>Populus balsamifera subsp. trichocarpa</synonym>\r
-                                          <rank>species</rank>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">91836</id>\r
-                                      <scientific_name>malvids</scientific_name>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <name>Brassicales &amp; Sapindales</name>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">3699</id>\r
-                                          <scientific_name>Brassicales</scientific_name>\r
-                                          <rank>order</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">3700</id>\r
-                                            <scientific_name>Brassicaceae</scientific_name>\r
-                                            <rank>family</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">3701</id>\r
-                                              <scientific_name>Arabidopsis</scientific_name>\r
-                                              <rank>genus</rank>\r
-                                            </taxonomy>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">59689</id>\r
-                                                <code>ARALY</code>\r
-                                                <scientific_name>Arabidopsis lyrata</scientific_name>\r
-                                                <common_name>Lyre-leaved rock-cress</common_name>\r
-                                                <synonym>Arabis lyrata</synonym>\r
-                                                <rank>species</rank>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                            <clade>\r
-                                              <taxonomy>\r
-                                                <id provider="uniprot">3702</id>\r
-                                                <code>ARATH</code>\r
-                                                <scientific_name>Arabidopsis thaliana</scientific_name>\r
-                                                <common_name>Mouse-ear cress</common_name>\r
-                                                <rank>species</rank>\r
-                                              </taxonomy>\r
-                                            </clade>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">98038</id>\r
-                                              <code>THEHA</code>\r
-                                              <scientific_name>Thellungiella halophila</scientific_name>\r
-                                              <common_name>Salt cress</common_name>\r
-                                              <rank>species</rank>\r
-                                              <uri>http://mplant.oxfordjournals.org/content/2/1/3/F1.large.jpg</uri>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">3649</id>\r
-                                            <code>CARPA</code>\r
-                                            <scientific_name>Carica papaya</scientific_name>\r
-                                            <common_name>Papaya</common_name>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://www.biopix.com/photos/jko-carica-papaya-00412.jpg</uri>\r
-                                            <uri>http://www.texasriviera.com/greenthumbs/papaya10.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">2706</id>\r
-                                          <scientific_name>Citrus</scientific_name>\r
-                                          <rank>genus</rank>\r
-                                        </taxonomy>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">85681</id>\r
-                                            <code>CCLXX</code>\r
-                                            <scientific_name>Citrus clementina</scientific_name>\r
-                                            <synonym>Citrus clementina hort. ex Tanaka</synonym>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://www.citrusgenomedb.org/sites/default/files/tripal/tripal_organism/images/Citrus_clementina.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">2711</id>\r
-                                            <code>CITSI</code>\r
-                                            <scientific_name>Citrus sinensis</scientific_name>\r
-                                            <common_name>Sweet orange</common_name>\r
-                                            <synonym>Citrus x sinensis</synonym>\r
-                                            <synonym>Citrus aurantium var. sinensis</synonym>\r
-                                            <rank>species</rank>\r
-                                            <uri>http://www.west-crete.com/flowers/photos/citrus_sinensis-1.jpg</uri>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">71139</id>\r
-                                        <code>EUCGR</code>\r
-                                        <scientific_name>Eucalyptus grandis</scientific_name>\r
-                                        <common_name>Flooded gum</common_name>\r
-                                        <rank>species</rank>\r
-                                        <uri>http://www.calflora.net/losangelesarboretum/images/eucalyptus_grandis.jpg</uri>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="eol">582304</id>\r
-                                    <code>VITVI</code>\r
-                                    <scientific_name>Vitis vinifera</scientific_name>\r
-                                    <common_name>Grape</common_name>\r
-                                    <rank>species</rank>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">91888</id>\r
-                                  <scientific_name>lamiids</scientific_name>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">4070</id>\r
-                                    <scientific_name>Solanaceae</scientific_name>\r
-                                    <rank>family</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">4107</id>\r
-                                      <scientific_name>Solanum</scientific_name>\r
-                                      <rank>genus</rank>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">49274</id>\r
-                                        <scientific_name>Lycopersicon</scientific_name>\r
-                                        <rank>subgenus</rank>\r
-                                      </taxonomy>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">4081</id>\r
-                                          <code>SOLLC</code>\r
-                                          <scientific_name>Solanum lycopersicum</scientific_name>\r
-                                          <common_name>Tomato</common_name>\r
-                                          <synonym>Lycopersicon esculentum</synonym>\r
-                                          <rank>species</rank>\r
-                                          <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0905/1214.jpeg</uri>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">4084</id>\r
-                                          <code>SOLPI</code>\r
-                                          <scientific_name>Solanum pimpinellifolium</scientific_name>\r
-                                          <common_name>Currant tomato</common_name>\r
-                                          <synonym>Lycopersicon pimpinellifolium</synonym>\r
-                                          <rank>species</rank>\r
-                                          <uri>http://upload.wikimedia.org/wikipedia/commons/b/b8/Currant_tomato.jpg</uri>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">4113</id>\r
-                                        <code>SOLTU</code>\r
-                                        <scientific_name>Solanum tuberosum</scientific_name>\r
-                                        <common_name>Potato</common_name>\r
-                                        <rank>species</rank>\r
-                                        <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0508/0344.jpeg</uri>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">4097</id>\r
-                                      <code>TOBAC</code>\r
-                                      <scientific_name>Nicotiana tabacum</scientific_name>\r
-                                      <common_name>Common tobacco</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0105/2073.jpeg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">4155</id>\r
-                                    <code>MIMGU</code>\r
-                                    <scientific_name>Mimulus guttatus</scientific_name>\r
-                                    <common_name>Yellow monkey flower</common_name>\r
-                                    <synonym>Yellow monkey flower</synonym>\r
-                                    <rank>species</rank>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">218851</id>\r
-                                <code>AQUCA</code>\r
-                                <scientific_name>Aquilegia caerulea</scientific_name>\r
-                                <authority>E.James</authority>\r
-                                <common_name>Rocky mountain columbine</common_name>\r
-                                <synonym>Aquilegia coerulea</synonym>\r
-                                <rank>species</rank>\r
-                                <uri>http://www.wildflower.org/image_archive/320x240/PCD3618/PCD3618_IMG0033.JPG</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">4447</id>\r
-                              <scientific_name>Liliopsida</scientific_name>\r
-                              <common_name>monocots</common_name>\r
-                              <synonym>Monocotyledoneae</synonym>\r
-                              <rank>class</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">4479</id>\r
-                                <scientific_name>Poaceae</scientific_name>\r
-                                <common_name>grass family</common_name>\r
-                                <synonym>Gramineae</synonym>\r
-                                <rank>family</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">147369</id>\r
-                                  <scientific_name>Panicoideae</scientific_name>\r
-                                  <authority>Link, 1827</authority>\r
-                                  <synonym>Centothecoideae</synonym>\r
-                                  <rank>subfamily</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">147429</id>\r
-                                    <scientific_name>Andropogoneae</scientific_name>\r
-                                    <authority>Dumort., 1824</authority>\r
-                                    <rank>tribe</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">4558</id>\r
-                                      <code>SORBI</code>\r
-                                      <scientific_name>Sorghum bicolor</scientific_name>\r
-                                      <common_name>Sorghum</common_name>\r
-                                      <synonym>Sorghum vulgare</synonym>\r
-                                      <rank>species</rank>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">4577</id>\r
-                                      <code>MAIZE</code>\r
-                                      <scientific_name>Zea mays</scientific_name>\r
-                                      <common_name>Maize</common_name>\r
-                                      <rank>species</rank>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">147428</id>\r
-                                    <scientific_name>Paniceae</scientific_name>\r
-                                    <rank>tribe</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">38727</id>\r
-                                      <code>PANVG</code>\r
-                                      <scientific_name>Panicum virgatum</scientific_name>\r
-                                      <common_name>switchgrass</common_name>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/2/29/PanicumVirgatum.jpg/220px-PanicumVirgatum.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">4555</id>\r
-                                      <code>SETIT</code>\r
-                                      <scientific_name>Setaria italica</scientific_name>\r
-                                      <common_name>Foxtail millet</common_name>\r
-                                      <synonym>Panicum italicum</synonym>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://en.academic.ru/pictures/enwiki/83/Setaria_italica0.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">359160</id>\r
-                                  <scientific_name>BEP clade</scientific_name>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">4527</id>\r
-                                    <scientific_name>Oryza</scientific_name>\r
-                                    <rank>genus</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">4530</id>\r
-                                      <code>ORYSA</code>\r
-                                      <scientific_name>Oryza sativa</scientific_name>\r
-                                      <common_name>Rice</common_name>\r
-                                      <rank>species</rank>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">39947</id>\r
-                                      <code>ORYSJ</code>\r
-                                      <scientific_name>Oryza sativa subsp. japonica</scientific_name>\r
-                                      <common_name>Rice</common_name>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">147368</id>\r
-                                    <scientific_name>Pooideae</scientific_name>\r
-                                    <rank>subfamily</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">15368</id>\r
-                                      <code>BRADI</code>\r
-                                      <scientific_name>Brachypodium distachyon</scientific_name>\r
-                                      <common_name>Purple false brome</common_name>\r
-                                      <synonym>Trachynia distachya</synonym>\r
-                                      <rank>species</rank>\r
-                                      <uri>http://upload.wikimedia.org/wikipedia/commons/0/01/Brachypodium_distachyon_Bd21-3.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">112509</id>\r
-                                      <code>HORVD</code>\r
-                                      <scientific_name>Hordeum vulgare var. distichum</scientific_name>\r
-                                      <common_name>Two-rowed barley</common_name>\r
-                                      <rank>subspecies</rank>\r
-                                      <uri>http://www.missouriplants.com/Grasses/Hordeum_vulgare_plant.jpg</uri>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">214687</id>\r
-                                <code>MUSAM</code>\r
-                                <scientific_name>Musa acuminata subsp. malaccensis</scientific_name>\r
-                                <authority>(Ridl.) N.W.Simmonds</authority>\r
-                                <common_name>Wild banana</common_name>\r
-                                <synonym>Musa malaccensis</synonym>\r
-                                <rank>subspecies</rank>\r
-                                <uri>http://farm5.staticflickr.com/4009/4572831376_07ca3089d1_z.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">3329</id>\r
-                            <code>PICAB</code>\r
-                            <scientific_name>Picea abies</scientific_name>\r
-                            <authority>H.Karst</authority>\r
-                            <common_name>Norway spruce</common_name>\r
-                            <synonym>Picea excelsa</synonym>\r
-                            <rank>species</rank>\r
-                            <uri>http://pharm1.pharmazie.uni-greifswald.de/allgemei/serturn/arzpfl-b/picea_a.jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">88036</id>\r
-                          <code>SELML</code>\r
-                          <scientific_name>Selaginella moellendorffii</scientific_name>\r
-                          <authority>Hieron</authority>\r
-                          <common_name>Spikemoss</common_name>\r
-                          <rank>species</rank>\r
-                          <uri>http://www.plantsystematics.org/users/robbin/5_22_06/upload121/Selag_moellendorffii3.JPG</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">145481</id>\r
-                        <code>PHYPA</code>\r
-                        <scientific_name>Physcomitrella patens subsp. patens</scientific_name>\r
-                        <common_name>Moss</common_name>\r
-                        <rank>subspecies</rank>\r
-                        <uri>http://www.aua.gr/plantdevelopment/Photos2/01%20Physcomitrella%20patens.jpg</uri>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">3041</id>\r
-                      <scientific_name>Chlorophyta</scientific_name>\r
-                      <rank>phylum</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">13792</id>\r
-                        <scientific_name>Mamiellales</scientific_name>\r
-                        <rank>order</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">70447</id>\r
-                          <scientific_name>Ostreococcus</scientific_name>\r
-                          <rank>genus</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">436017</id>\r
-                            <code>OSTLU</code>\r
-                            <scientific_name>Ostreococcus lucimarinus (strain CCE9901)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">385169</id>\r
-                            <code>ORCXX</code>\r
-                            <scientific_name>Ostreococcus sp. RCC809</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">70448</id>\r
-                            <code>OSTTA</code>\r
-                            <scientific_name>Ostreococcus tauri</scientific_name>\r
-                            <rank>species</rank>\r
-                            <uri>http://genome.jgi-psf.org/Ost9901_3/Ostta.jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">38832</id>\r
-                          <scientific_name>Micromonas</scientific_name>\r
-                          <rank>genus</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">564608</id>\r
-                            <code>MICPC</code>\r
-                            <scientific_name>Micromonas pusilla (strain CCMP1545)</scientific_name>\r
-                            <common_name>Picoplanktonic green alga</common_name>\r
-                            <uri>http://www.mansfield.ohio-state.edu/~sabedon/microfla.jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">296587</id>\r
-                            <code>MICSR</code>\r
-                            <scientific_name>Micromonas sp. (strain RCC299 / NOUM17)</scientific_name>\r
-                            <common_name>Picoplanktonic green alga</common_name>\r
-                            <synonym>Micromonas sp. RCC299</synonym>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <name>Trebouxiophyceae &amp; Chlorophyceae</name>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">75966</id>\r
-                          <scientific_name>Trebouxiophyceae</scientific_name>\r
-                          <rank>class</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">763042</id>\r
-                            <code>ASCXX</code>\r
-                            <scientific_name>Asterochloris sp. Cgr/DA1pho</scientific_name>\r
-                            <rank>species</rank>\r
-                            <uri>http://genome.jgi-psf.org/Astpho1/Figure_3.jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">554065</id>\r
-                            <code>CHLVA</code>\r
-                            <scientific_name>Chlorella variabilis</scientific_name>\r
-                            <authority>Shihira &amp; Krauss 1965</authority>\r
-                            <common_name>Green alga</common_name>\r
-                            <synonym>Chlorella sp. NC64A</synonym>\r
-                            <synonym>Chlorella sp. Bnd1-ZK</synonym>\r
-                            <rank>species</rank>\r
-                            <uri>http://www.sinice.cz/res/image/collection/Chlorella.jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">574566</id>\r
-                            <code>CSUXX</code>\r
-                            <scientific_name>Coccomyxa subellipsoidea C-169</scientific_name>\r
-                            <synonym>Chlorella vulgaris C-169</synonym>\r
-                            <synonym>Coccomyxa sp. C-169</synonym>\r
-                            <rank>species</rank>\r
-                            <uri>http://genome.jgi.doe.gov/Coc_C169_1/Chlvu.jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">3042</id>\r
-                          <scientific_name>Chlamydomonadales</scientific_name>\r
-                          <rank>order</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">3055</id>\r
-                            <code>CHLRE</code>\r
-                            <scientific_name>Chlamydomonas reinhardtii</scientific_name>\r
-                            <synonym>Chlamydomonas smithii</synonym>\r
-                            <rank>species</rank>\r
-                            <uri>http://genome.jgi-psf.org/Chlre3/chlamy_BG.gif</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">3067</id>\r
-                            <code>VOLCA</code>\r
-                            <scientific_name>Volvox carteri</scientific_name>\r
-                            <common_name>Green alga</common_name>\r
-                            <rank>species</rank>\r
-                            <uri>http://genome.jgi-psf.org/Volca1/Volvox.jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">2763</id>\r
-                    <scientific_name>Rhodophyta</scientific_name>\r
-                    <common_name>red algae</common_name>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">265316</id>\r
-                      <scientific_name>Cyanidiaceae</scientific_name>\r
-                      <rank>family</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">45157</id>\r
-                        <code>CYAME</code>\r
-                        <scientific_name>Cyanidioschyzon merolae</scientific_name>\r
-                        <common_name>Red alga</common_name>\r
-                        <rank>species</rank>\r
-                        <uri>http://www.shigen.nig.ac.jp/algae_tree/CyanidiophyceaeIMG.jpg</uri>\r
-                      </taxonomy>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">130081</id>\r
-                        <code>GALSU</code>\r
-                        <scientific_name>Galdieria sulphuraria</scientific_name>\r
-                        <common_name>Red alga</common_name>\r
-                        <rank>species</rank>\r
-                        <uri>http://phenomena.nationalgeographic.com/files/2013/03/Alga.jpg</uri>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">2769</id>\r
-                      <code>CHOCR</code>\r
-                      <scientific_name>Chondrus crispus</scientific_name>\r
-                      <common_name>Carragheen moss</common_name>\r
-                      <synonym>Irish moss</synonym>\r
-                      <rank>species</rank>\r
-                      <uri>http://www.seaweed.ie/_images/MG3_0485.png</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">38254</id>\r
-                    <scientific_name>Glaucocystophyceae</scientific_name>\r
-                    <synonym>Glaucophyta</synonym>\r
-                    <rank>class</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">2762</id>\r
-                      <code>CYAPA</code>\r
-                      <scientific_name>Cyanophora paradoxa</scientific_name>\r
-                      <rank>species</rank>\r
-                      <uri>http://www.people.vcu.edu/~rfisher/paradoxa.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">38271</id>\r
-                      <scientific_name>Glaucocystis nostochinearum</scientific_name>\r
-                      <rank>species</rank>\r
-                      <uri>http://protist.i.hosei.ac.jp/pdb/images/Others/Glaucocystis/sp_02.jpg</uri>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <name>Hacrobia (Cryptophyta &amp; Haptophyceae &amp; Centroheliozoa)</name>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">2903</id>\r
-                    <code>EMIHU</code>\r
-                    <scientific_name>Emiliania huxleyi</scientific_name>\r
-                    <synonym>Pontosphaera huxleyi</synonym>\r
-                    <rank>species</rank>\r
-                    <uri>http://research.kahaku.go.jp/zoology/kaisei/hp-2/images/hapto.jpg</uri>\r
-                  </taxonomy>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">55529</id>\r
-                    <code>GUITH</code>\r
-                    <scientific_name>Guillardia theta</scientific_name>\r
-                    <synonym>Cryptomonas phi</synonym>\r
-                    <rank>species</rank>\r
-                    <uri>http://genome.jgi.doe.gov/public/Guith1/Gtheta_SEM.jpg</uri>\r
-                  </taxonomy>\r
-                  <reference doi="10.1016/j.cub.2007.03.069">\r
-                    <desc>Multiple Gene Phylogenies Support the Monophyly of Cryptomonad and Haptophyte Host Lineages</desc>\r
-                  </reference>\r
-                  <reference>\r
-                  </reference>\r
-                </clade>\r
-              </clade>\r
-            </clade>\r
-            <clade>\r
-              <name>Stramenopiles &amp; Alveolata &amp; Rhizaria</name>\r
-              <reference doi="10.1186/1471-2148-10-377">\r
-                <desc>Evolution of Rhizaria: new insights from phylogenomic analysis of uncultivated protists</desc>\r
-              </reference>\r
-              <reference>\r
-              </reference>\r
-              <clade>\r
-                <name>Stramenopiles &amp; Alveolata</name>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">33630</id>\r
-                    <scientific_name>Alveolata</scientific_name>\r
-                    <rank>superphylum</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <name>Apicomplexa &amp; Dinophyceae</name>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">5794</id>\r
-                        <scientific_name>Apicomplexa</scientific_name>\r
-                        <rank>phylum</rank>\r
-                      </taxonomy>\r
-                      <reference doi="10.1101/gr.083386.108">\r
-                        <desc>The origins of apicomplexan sequence innovation (2009)</desc>\r
-                      </reference>\r
-                      <reference>\r
-                      </reference>\r
-                      <clade>\r
-                        <name>Aconoidasida &amp; Coccidia</name>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">422676</id>\r
-                            <scientific_name>Aconoidasida</scientific_name>\r
-                            <authority>Mehlhorn et al. 1980</authority>\r
-                            <synonym>Hematozoa</synonym>\r
-                            <rank>class</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">5820</id>\r
-                              <scientific_name>Plasmodium</scientific_name>\r
-                              <rank>genus</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">5825</id>\r
-                                <code>PLACH</code>\r
-                                <scientific_name>Plasmodium chabaudi</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">36329</id>\r
-                                <code>PLAF7</code>\r
-                                <scientific_name>Plasmodium falciparum (isolate 3D7)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">73239</id>\r
-                                <code>PLAYO</code>\r
-                                <scientific_name>Plasmodium yoelii yoelii</scientific_name>\r
-                                <rank>subspecies</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">126793</id>\r
-                                <code>PLAVS</code>\r
-                                <scientific_name>Plasmodium vivax (strain Salvador I)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">5863</id>\r
-                              <scientific_name>Piroplasmida</scientific_name>\r
-                              <common_name>Piroplasmids</common_name>\r
-                              <rank>order</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <name>Theileria</name>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">5873</id>\r
-                                <scientific_name>Theileria</scientific_name>\r
-                                <rank>genus</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">5874</id>\r
-                                  <code>THEAN</code>\r
-                                  <scientific_name>Theileria annulata</scientific_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">5875</id>\r
-                                  <code>THEPA</code>\r
-                                  <scientific_name>Theileria parva</scientific_name>\r
-                                  <common_name>East coast fever infection agent</common_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">5865</id>\r
-                                <code>BABBO</code>\r
-                                <scientific_name>Babesia bovis</scientific_name>\r
-                                <rank>species</rank>\r
-                                <uri>http://www.perulactea.com/wp-content/uploads/2012/03/Babesia_bovis.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">5796</id>\r
-                            <scientific_name>Coccidia</scientific_name>\r
-                            <common_name>coccidians</common_name>\r
-                            <rank>subclass</rank>\r
-                          </taxonomy>\r
-                          <reference doi="10.1093/molbev/msn213">\r
-                            <desc>The Apicomplexan Whole-Genome Phylogeny: An Analysis of Incongruence among Gene Trees</desc>\r
-                          </reference>\r
-                          <reference>\r
-                          </reference>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">5802</id>\r
-                              <code>EIMTE</code>\r
-                              <scientific_name>Eimeria tenella</scientific_name>\r
-                              <common_name>Coccidian parasite</common_name>\r
-                              <rank>species</rank>\r
-                              <uri>http://www.k-state.edu/parasitology/625tutorials/FIGtenella.jpg</uri>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">5811</id>\r
-                              <code>TOXGO</code>\r
-                              <scientific_name>Toxoplasma gondii</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">5806</id>\r
-                          <scientific_name>Cryptosporidium</scientific_name>\r
-                          <rank>genus</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">237895</id>\r
-                            <code>CRYHO</code>\r
-                            <scientific_name>Cryptosporidium hominis</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">5807</id>\r
-                            <code>CRYPV</code>\r
-                            <scientific_name>Cryptosporidium parvum</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">353152</id>\r
-                            <code>CRYPI</code>\r
-                            <scientific_name>Cryptosporidium parvum (strain Iowa II)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">2864</id>\r
-                        <scientific_name>Dinophyceae</scientific_name>\r
-                        <authority>Fritsch, 1927</authority>\r
-                        <common_name>dinoflagellates</common_name>\r
-                        <synonym>Chromophyta</synonym>\r
-                        <synonym>Dinoflagellata</synonym>\r
-                        <synonym>Pyrrophyta</synonym>\r
-                        <rank>class</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">2866</id>\r
-                          <code>CRYCO</code>\r
-                          <scientific_name>Crypthecodinium cohnii</scientific_name>\r
-                          <common_name>Dinoflagellate</common_name>\r
-                          <rank>species</rank>\r
-                          <uri>http://www.lamolina.net/image/DHAcell.jpg</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">2923</id>\r
-                          <code>THOHE</code>\r
-                          <scientific_name>Thoracosphaera heimii</scientific_name>\r
-                          <common_name>Dinoflagellate</common_name>\r
-                          <rank>species</rank>\r
-                          <uri>http://planktonnet.awi.de/repository/rawdata-PlanktonNet2/viewable/fjouenne_21806a_20080123172436_small.jpg</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">5878</id>\r
-                      <scientific_name>Ciliophora</scientific_name>\r
-                      <common_name>ciliates</common_name>\r
-                      <rank>phylum</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">431838</id>\r
-                        <scientific_name>Intramacronucleata</scientific_name>\r
-                        <rank>subphylum</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">6020</id>\r
-                          <scientific_name>Oligohymenophorea</scientific_name>\r
-                          <rank>class</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">5888</id>\r
-                            <code>PARTE</code>\r
-                            <scientific_name>Paramecium tetraurelia</scientific_name>\r
-                            <rank>species</rank>\r
-                            <uri>http://research.plattsburgh.edu/ciliates/images/jdopics208.jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">312017</id>\r
-                            <code>TETTS</code>\r
-                            <scientific_name>Tetrahymena thermophila (strain SB210)</scientific_name>\r
-                            <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/0/08/Tetrahymena_thermophila.png/220px-Tetrahymena_thermophila.png</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">1172189</id>\r
-                          <code>OTRXX</code>\r
-                          <scientific_name>Oxytricha trifallax</scientific_name>\r
-                          <authority>Stein, 1859</authority>\r
-                          <rank>species</rank>\r
-                          <uri>http://centexnaturalist.com/foldermainmenus/sfprotists/folderprotozoans/oxytricha04.gif</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">5961</id>\r
-                        <code>BLEJA</code>\r
-                        <scientific_name>Blepharisma japonicum</scientific_name>\r
-                        <rank>species</rank>\r
-                        <uri>http://upload.wikimedia.org/wikipedia/commons/2/23/Mikrofoto.de-Blepharisma_japonicum_15.jpg</uri>\r
-                        <uri>http://protist.i.hosei.ac.jp/PDB/PCD0473/C/016.jpg</uri>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">33634</id>\r
-                    <scientific_name>Stramenopiles</scientific_name>\r
-                    <authority>Patterson 1989, emend. Adl et al. 2005</authority>\r
-                    <synonym>Chromophyta</synonym>\r
-                    <synonym>heterokonts</synonym>\r
-                    <synonym>Heterokontophyta</synonym>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <name>Labyrinthulomycetes &amp; Ochrophyta &amp; Oomycetes</name>\r
-                    <clade>\r
-                      <name>Ochrophyta &amp; Oomycetes</name>\r
-                      <reference doi="10.1016/j.protis.2008.11.004">\r
-                        <desc>Seven Gene Phylogeny of Heterokonts</desc>\r
-                      </reference>\r
-                      <reference>\r
-                      </reference>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <scientific_name>Ochrophyta</scientific_name>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">2836</id>\r
-                            <scientific_name>Bacillariophyta</scientific_name>\r
-                            <common_name>diatoms</common_name>\r
-                            <rank>class</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">33850</id>\r
-                              <scientific_name>Bacillariophycidae</scientific_name>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">186039</id>\r
-                                <code>FCYXX</code>\r
-                                <scientific_name>Fragilariopsis cylindrus</scientific_name>\r
-                                <authority>Krieger</authority>\r
-                                <synonym>Nitzschia cylindrus</synonym>\r
-                                <rank>species</rank>\r
-                                <uri>http://www.awi.de/fileadmin/user_upload/News/Press_Releases/2012/1._Quartal/000_Fragilariposis_Chloroplasten_GDieckmann_w.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">2850</id>\r
-                                <code>PHATR</code>\r
-                                <scientific_name>Phaeodactylum tricornutum</scientific_name>\r
-                                <authority>Bohlin</authority>\r
-                                <rank>species</rank>\r
-                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/b/bf/Phaeodactylum_tricornutum.png/637px-Phaeodactylum_tricornutum.png</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">35127</id>\r
-                              <scientific_name>Thalassiosira</scientific_name>\r
-                              <rank>genus</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">35128</id>\r
-                                <code>THAPS</code>\r
-                                <scientific_name>Thalassiosira pseudonana</scientific_name>\r
-                                <authority>Hasle &amp; Heimdal</authority>\r
-                                <common_name>Marine diatom</common_name>\r
-                                <synonym>Cyclotella nana</synonym>\r
-                                <rank>species</rank>\r
-                                <uri>http://www.genomenewsnetwork.org/gnn_images/sequenced_genomes/thalassiosira_pseudonana.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">159749</id>\r
-                                <code>THAOC</code>\r
-                                <scientific_name>Thalassiosira oceanica</scientific_name>\r
-                                <common_name>Marine diatom</common_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <name>Pelagophyceae &amp; Phaeophyceae</name>\r
-                          <reference doi="10.1128/AEM.06952-11">\r
-                            <desc>Distribution patterns and phylogeny of marine stramenopiles in the north pacific ocean</desc>\r
-                          </reference>\r
-                          <reference>\r
-                          </reference>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">44056</id>\r
-                              <code>AURAN</code>\r
-                              <scientific_name>Aureococcus anophagefferens</scientific_name>\r
-                              <authority>Hargraves &amp; Sieburth</authority>\r
-                              <common_name>Harmful bloom alga</common_name>\r
-                              <rank>species</rank>\r
-                              <uri>http://www.dec.ny.gov/images/fish_marine_images/alex1.jpg</uri>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">2880</id>\r
-                              <code>ECTSI</code>\r
-                              <scientific_name>Ectocarpus siliculosus</scientific_name>\r
-                              <common_name>Brown alga</common_name>\r
-                              <rank>species</rank>\r
-                              <uri>http://www.research.kobe-u.ac.jp/rcis-ku-macc/j.p.folder/photo/KU-1110%20Ectocarpus%20siliculosus%20b%20x20.jpg</uri>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">4762</id>\r
-                          <scientific_name>Oomycetes</scientific_name>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">4776</id>\r
-                            <scientific_name>Peronosporales</scientific_name>\r
-                            <rank>order</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">4783</id>\r
-                              <scientific_name>Phytophthora</scientific_name>\r
-                              <rank>genus</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">4787</id>\r
-                                <code>PHYIN</code>\r
-                                <scientific_name>Phytophthora infestans</scientific_name>\r
-                                <authority>(Mont.) de Bary 1876</authority>\r
-                                <common_name>Potato late blight fungus</common_name>\r
-                                <rank>species</rank>\r
-                                <uri>http://bioweb.uwlax.edu/bio203/s2007/benrud_jaco/index_files/image4901.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">164328</id>\r
-                                <code>PHYRM</code>\r
-                                <scientific_name>Phytophthora ramorum</scientific_name>\r
-                                <common_name>Sudden oak death agent</common_name>\r
-                                <rank>species</rank>\r
-                                <uri>http://genome.jgi-psf.org/Phyra1_1/pramorum.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">67593</id>\r
-                                <code>PHYSO</code>\r
-                                <scientific_name>Phytophthora sojae</scientific_name>\r
-                                <common_name>Soybean stem and root rot agent</common_name>\r
-                                <synonym>Phytophthora megasperma f. sp. glycines</synonym>\r
-                                <rank>species</rank>\r
-                                <uri>http://www.apsnet.org/publications/imageresources/PublishingImages/2003/IW000025b.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">4785</id>\r
-                                <code>PHYCI</code>\r
-                                <scientific_name>Phytophthora cinnamomi</scientific_name>\r
-                                <common_name>Cinnamon fungus</common_name>\r
-                                <rank>species</rank>\r
-                                <uri>http://genome.jgi.doe.gov/public/Phyci1/Pcinnamomi_hyphae_and_chlamydospores.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">4784</id>\r
-                                <code>PHYCP</code>\r
-                                <scientific_name>Phytophthora capsici</scientific_name>\r
-                                <rank>species</rank>\r
-                                <uri>http://upload.wikimedia.org/wikipedia/commons/2/24/Phytophthora_capsici_sporangia.jpg</uri>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">559515</id>\r
-                              <code>HYAAE</code>\r
-                              <scientific_name>Hyaloperonospora arabidopsidis (strain Emoy2)</scientific_name>\r
-                              <common_name>Downy mildew agent</common_name>\r
-                              <synonym>Peronospora arabidopsidis</synonym>\r
-                              <uri>http://www.nature.com/nature/journal/v470/n7332/images/470044a-f1.2.jpg</uri>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">65071</id>\r
-                            <code>PYTUL</code>\r
-                            <scientific_name>Pythium ultimum</scientific_name>\r
-                            <rank>species</rank>\r
-                            <uri>http://www.plantpath.cornell.edu/labs/enelson/images/Germ_Sporangia(small).jpg</uri>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">33674</id>\r
-                        <scientific_name>Thraustochytriaceae</scientific_name>\r
-                        <synonym>Thraustochytriales</synonym>\r
-                        <rank>family</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">702273</id>\r
-                          <code>AKEXX</code>\r
-                          <scientific_name>Aplanochytrium kerguelense PBS07</scientific_name>\r
-                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/9/91/Aplanolm.jpg/120px-Aplanolm.jpg</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">876976</id>\r
-                          <code>SAGXX</code>\r
-                          <scientific_name>Schizochytrium aggregatum ATCC 28209</scientific_name>\r
-                          <uri>http://genome.jgi-psf.org/public/Schag1/120124-ATCC28209-22.JPG</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">87102</id>\r
-                          <code>ALIXX</code>\r
-                          <scientific_name>Aurantiochytrium limacinum</scientific_name>\r
-                          <synonym>Schizochytrium limacinum</synonym>\r
-                          <rank>species</rank>\r
-                          <uri>http://upload.wikimedia.org/wikipedia/commons/3/38/Aurantiochytrium_limacinum_SR21.jpg</uri>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">12968</id>\r
-                      <code>BLAHO</code>\r
-                      <scientific_name>Blastocystis hominis</scientific_name>\r
-                      <rank>species</rank>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">543769</id>\r
-                  <scientific_name>Rhizaria</scientific_name>\r
-                </taxonomy>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">71427</id>\r
-                    <scientific_name>Allogromia laticollaris</scientific_name>\r
-                    <rank>species</rank>\r
-                    <uri>http://forambarcoding.unige.ch/system/pictures/424/s600/A.laticollaris1.jpg</uri>\r
-                  </taxonomy>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">227086</id>\r
-                    <code>BIGNA</code>\r
-                    <scientific_name>Bigelowiella natans</scientific_name>\r
-                    <common_name>Pedinomonas minutissima</common_name>\r
-                    <synonym>Chlorarachnion sp. (strain CCMP621)</synonym>\r
-                    <synonym>Pedinomonas minutissima</synonym>\r
-                    <rank>species</rank>\r
-                    <uri>http://genome.jgi.doe.gov/Bigna1/Bigna1.jpg</uri>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-            </clade>\r
-          </clade>\r
-          <clade>\r
-            <name>Excavata</name>\r
-            <reference doi="10.1038/nature04546">\r
-            </reference>\r
-            <clade>\r
-              <name>Kinetoplastida &amp; Heterolobosea</name>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">5653</id>\r
-                  <scientific_name>Kinetoplastida</scientific_name>\r
-                  <common_name>kinetoplasts</common_name>\r
-                  <rank>order</rank>\r
-                </taxonomy>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">5654</id>\r
-                    <scientific_name>Trypanosomatidae</scientific_name>\r
-                    <rank>family</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">5690</id>\r
-                      <scientific_name>Trypanosoma</scientific_name>\r
-                      <rank>genus</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">999953</id>\r
-                        <code>TRYB2</code>\r
-                        <scientific_name>Trypanosoma brucei brucei (strain 927/4 GUTat10.1)</scientific_name>\r
-                        <rank>strain</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">5693</id>\r
-                        <code>TRYCR</code>\r
-                        <scientific_name>Trypanosoma cruzi</scientific_name>\r
-                        <rank>species</rank>\r
-                        <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/0/0b/Trypanosoma_cruzi_crithidia.jpeg/220px-Trypanosoma_cruzi_crithidia.jpeg</uri>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">5658</id>\r
-                      <scientific_name>Leishmania</scientific_name>\r
-                      <rank>genus</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">5664</id>\r
-                        <code>LEIMA</code>\r
-                        <scientific_name>Leishmania major</scientific_name>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">5671</id>\r
-                        <code>LEIIN</code>\r
-                        <scientific_name>Leishmania infantum</scientific_name>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">5660</id>\r
-                        <code>LEIBR</code>\r
-                        <scientific_name>Leishmania braziliensis</scientific_name>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">75058</id>\r
-                    <code>BODSA</code>\r
-                    <scientific_name>Bodo saltans</scientific_name>\r
-                    <common_name>Flagellated protozoan</common_name>\r
-                    <rank>species</rank>\r
-                    <uri>http://protist.i.hosei.ac.jp/pdb/images/Mastigophora/Bodo/sp_1f.jpg</uri>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">5762</id>\r
-                  <code>NAEGR</code>\r
-                  <scientific_name>Naegleria gruberi</scientific_name>\r
-                  <common_name>Amoeba</common_name>\r
-                  <rank>species</rank>\r
-                  <uri>http://media.npr.org/assets/news/2010/03/05/amoeba_custom-a24a7e20b8d9f1b681cf6a25d0d046d84f238349-s3.jpg</uri>\r
-                </taxonomy>\r
-              </clade>\r
-            </clade>\r
-            <clade>\r
-              <name>Metamonada</name>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">184922</id>\r
-                  <code>GIAIC</code>\r
-                  <scientific_name>Giardia intestinalis (strain ATCC 50803 / WB clone C6)</scientific_name>\r
-                  <synonym>Giardia intestinalis (strain ATCC 50803 / WB clone C6)</synonym>\r
-                  <synonym>Giardia lamblia</synonym>\r
-                  <rank>species</rank>\r
-                </taxonomy>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">5722</id>\r
-                  <code>TRIVA</code>\r
-                  <scientific_name>Trichomonas vaginalis</scientific_name>\r
-                  <rank>species</rank>\r
-                </taxonomy>\r
-              </clade>\r
-            </clade>\r
-          </clade>\r
-          <clade>\r
-            <taxonomy>\r
-              <id provider="uniprot">554296</id>\r
-              <scientific_name>Apusozoa</scientific_name>\r
-            </taxonomy>\r
-            <reference doi="10.1016/j.protis.2008.06.002">\r
-              <desc>Planomonadida ord. nov. (Apusozoa): Ultrastructural Affinity with Micronuclearia podoventralis and Deep Divergences within Planomonas gen. nov</desc>\r
-            </reference>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">554453</id>\r
-                <scientific_name>Planomonas micra</scientific_name>\r
-                <authority>(Cavalier-Smith, 2008) Heiss, Walker &amp; Simpson 2010</authority>\r
-                <synonym>Apusomonadidae sp. micra</synonym>\r
-                <rank>species</rank>\r
-              </taxonomy>\r
-            </clade>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">529818</id>\r
-                <code>TTRXX</code>\r
-                <scientific_name>Thecamonas trahens</scientific_name>\r
-                <authority>Larsen &amp; Patterson 1990</authority>\r
-                <synonym>Amastigomonas trahens</synonym>\r
-                <rank>species</rank>\r
-                <uri>http://bioinformatica.upf.edu/2011/projectes11/Cx/images/pro_t_tra.jpg</uri>\r
-              </taxonomy>\r
-            </clade>\r
-          </clade>\r
-        </clade>\r
-      </clade>\r
-      <clade>\r
-        <taxonomy>\r
-          <id provider="uniprot">2157</id>\r
-          <scientific_name>Archaea</scientific_name>\r
-          <rank>superkingdom</rank>\r
-        </taxonomy>\r
-        <clade>\r
-          <name>a_62</name>\r
-          <clade>\r
-            <name>a_56</name>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">28890</id>\r
-                <scientific_name>Euryarchaeota</scientific_name>\r
-                <rank>phylum</rank>\r
-              </taxonomy>\r
-              <clade>\r
-                <name>a_44</name>\r
-                <clade>\r
-                  <name>a_28</name>\r
-                  <clade>\r
-                    <name>a_26</name>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">224756</id>\r
-                        <scientific_name>Methanomicrobia</scientific_name>\r
-                        <rank>class</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <name>a_14</name>\r
-                        <clade>\r
-                          <name>a_12</name>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">2206</id>\r
-                              <scientific_name>Methanosarcinaceae</scientific_name>\r
-                              <rank>family</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">2207</id>\r
-                                <scientific_name>Methanosarcina</scientific_name>\r
-                                <rank>genus</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <name>a_2</name>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">2214</id>\r
-                                    <code>METAC</code>\r
-                                    <scientific_name>Methanosarcina acetivorans</scientific_name>\r
-                                    <rank>species</rank>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">269797</id>\r
-                                    <code>METBF</code>\r
-                                    <scientific_name>Methanosarcina barkeri (strain Fusaro / DSM 804)</scientific_name>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">2209</id>\r
-                                  <code>METMA</code>\r
-                                  <scientific_name>Methanosarcina mazei</scientific_name>\r
-                                  <synonym>Methanosarcina frisia</synonym>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">259564</id>\r
-                                <code>METBU</code>\r
-                                <scientific_name>Methanococcoides burtonii (strain DSM 6242)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <name>a_11</name>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">2191</id>\r
-                              <scientific_name>Methanomicrobiales</scientific_name>\r
-                              <rank>order</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <name>a_9</name>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">456442</id>\r
-                                  <code>METB6</code>\r
-                                  <scientific_name>Methanoregula boonei (strain 6A8)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">2203</id>\r
-                                  <code>METHU</code>\r
-                                  <scientific_name>Methanospirillum hungatei</scientific_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">368407</id>\r
-                                <code>METMJ</code>\r
-                                <scientific_name>Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">410358</id>\r
-                            <code>METLZ</code>\r
-                            <scientific_name>Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">349307</id>\r
-                          <code>METTP</code>\r
-                          <scientific_name>Methanosaeta thermophila (strain DSM 6194 / PT)</scientific_name>\r
-                          <synonym>Methanothrix thermophila (strain DSM 6194 / PT)</synonym>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">2236</id>\r
-                        <scientific_name>Halobacteriaceae</scientific_name>\r
-                        <rank>family</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <name>a_23</name>\r
-                        <clade>\r
-                          <name>a_19</name>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">2238</id>\r
-                              <code>HALMA</code>\r
-                              <scientific_name>Haloarcula marismortui</scientific_name>\r
-                              <synonym>Halobacterium marismortui</synonym>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">2257</id>\r
-                              <code>NATPH</code>\r
-                              <scientific_name>Natronomonas pharaonis</scientific_name>\r
-                              <common_name>Natronobacterium pharaonis</common_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <name>a_22</name>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">2239</id>\r
-                            <scientific_name>Halobacterium</scientific_name>\r
-                            <rank>genus</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">478009</id>\r
-                              <code>HALS3</code>\r
-                              <scientific_name>Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)</scientific_name>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">2243</id>\r
-                              <code>HALSP</code>\r
-                              <scientific_name>Halobacterium sp.</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">362976</id>\r
-                          <code>HALWD</code>\r
-                          <scientific_name>Haloquadratum walsbyi (strain DSM 16790)</scientific_name>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">224325</id>\r
-                      <code>ARCFU</code>\r
-                      <scientific_name>Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)</scientific_name>\r
-                      <rank>strain</rank>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <name>a_43</name>\r
-                  <clade>\r
-                    <name>a_41</name>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">2182</id>\r
-                        <scientific_name>Methanococcales</scientific_name>\r
-                        <rank>order</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <name>a_31</name>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">2190</id>\r
-                            <code>METJA</code>\r
-                            <scientific_name>Methanocaldococcus jannaschii</scientific_name>\r
-                            <synonym>Methanococcus jannaschii</synonym>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">419665</id>\r
-                            <code>META3</code>\r
-                            <scientific_name>Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <name>a_34</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">2184</id>\r
-                          <scientific_name>Methanococcus</scientific_name>\r
-                          <rank>genus</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">39152</id>\r
-                            <code>METMP</code>\r
-                            <scientific_name>Methanococcus maripaludis</scientific_name>\r
-                            <synonym>Methanococcus deltae</synonym>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">406327</id>\r
-                            <code>METVS</code>\r
-                            <scientific_name>Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <name>a_40</name>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">2159</id>\r
-                        <scientific_name>Methanobacteriaceae</scientific_name>\r
-                        <rank>family</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <name>a_38</name>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">420247</id>\r
-                            <code>METS3</code>\r
-                            <scientific_name>Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">339860</id>\r
-                            <code>METST</code>\r
-                            <scientific_name>Methanosphaera stadtmanae (strain DSM 3091)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">187420</id>\r
-                          <code>METTH</code>\r
-                          <scientific_name>Methanobacterium thermoautotrophicum</scientific_name>\r
-                          <synonym>Methanobacterium thermoautotrophicum</synonym>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">2320</id>\r
-                      <code>METKA</code>\r
-                      <scientific_name>Methanopyrus kandleri</scientific_name>\r
-                      <rank>species</rank>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">2259</id>\r
-                  <scientific_name>Thermococcaceae</scientific_name>\r
-                  <rank>family</rank>\r
-                </taxonomy>\r
-                <clade>\r
-                  <name>PYRFU &amp; PYRKO &amp; PYRAB &amp; PYRHO</name>\r
-                  <clade>\r
-                    <name>PYRFU &amp; PYRKO</name>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">2261</id>\r
-                        <code>PYRFU</code>\r
-                        <scientific_name>Pyrococcus furiosus</scientific_name>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">69014</id>\r
-                        <code>PYRKO</code>\r
-                        <scientific_name>Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)</scientific_name>\r
-                        <synonym>Thermococcus kodakaraensis (strain KOD1)</synonym>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">2260</id>\r
-                      <scientific_name>Pyrococcus</scientific_name>\r
-                      <rank>genus</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">29292</id>\r
-                        <code>PYRAB</code>\r
-                        <scientific_name>Pyrococcus abyssi</scientific_name>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">53953</id>\r
-                        <code>PYRHO</code>\r
-                        <scientific_name>Pyrococcus horikoshii</scientific_name>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">523850</id>\r
-                    <code>THEON</code>\r
-                    <scientific_name>Thermococcus onnurineus (strain NA1)</scientific_name>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-            </clade>\r
-            <clade>\r
-              <name>a_55</name>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">228908</id>\r
-                  <code>NANEQ</code>\r
-                  <scientific_name>Nanoarchaeum equitans (strain Kin4-M)</scientific_name>\r
-                </taxonomy>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">436308</id>\r
-                  <code>NITMS</code>\r
-                  <scientific_name>Nitrosopumilus maritimus (strain SCM1)</scientific_name>\r
-                </taxonomy>\r
-              </clade>\r
-            </clade>\r
-          </clade>\r
-          <clade>\r
-            <taxonomy>\r
-              <id provider="uniprot">2301</id>\r
-              <scientific_name>Thermoplasmatales</scientific_name>\r
-              <rank>order</rank>\r
-            </taxonomy>\r
-            <clade>\r
-              <name>a_59</name>\r
-              <taxonomy>\r
-                <id provider="uniprot">2302</id>\r
-                <scientific_name>Thermoplasma</scientific_name>\r
-                <rank>genus</rank>\r
-              </taxonomy>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">273075</id>\r
-                  <code>THEAC</code>\r
-                  <scientific_name>Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)</scientific_name>\r
-                </taxonomy>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">273116</id>\r
-                  <code>THEVO</code>\r
-                  <scientific_name>Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / IFO 15438 / JCM 9571 / GSS1)</scientific_name>\r
-                </taxonomy>\r
-              </clade>\r
-            </clade>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">263820</id>\r
-                <code>PICTO</code>\r
-                <scientific_name>Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)</scientific_name>\r
-              </taxonomy>\r
-            </clade>\r
-          </clade>\r
-        </clade>\r
-        <clade>\r
-          <name>a_93</name>\r
-          <clade>\r
-            <taxonomy>\r
-              <id provider="uniprot">183924</id>\r
-              <scientific_name>Thermoprotei</scientific_name>\r
-              <rank>class</rank>\r
-            </taxonomy>\r
-            <clade>\r
-              <name>a_83</name>\r
-              <clade>\r
-                <name>a_81</name>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">2267</id>\r
-                    <scientific_name>Thermoproteaceae</scientific_name>\r
-                    <rank>family</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <name>a_71</name>\r
-                    <clade>\r
-                      <name>a_67</name>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">2276</id>\r
-                        <scientific_name>Pyrobaculum</scientific_name>\r
-                        <rank>genus</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <name>a_65</name>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">340102</id>\r
-                            <code>PYRAR</code>\r
-                            <scientific_name>Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">410359</id>\r
-                            <code>PYRCJ</code>\r
-                            <scientific_name>Pyrobaculum calidifontis (strain JCM 11548 / VA1)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">13773</id>\r
-                          <code>PYRAE</code>\r
-                          <scientific_name>Pyrobaculum aerophilum</scientific_name>\r
-                          <rank>species</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <name>a_70</name>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">384616</id>\r
-                          <code>PYRIL</code>\r
-                          <scientific_name>Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)</scientific_name>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">444157</id>\r
-                          <code>THENV</code>\r
-                          <scientific_name>Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta)</scientific_name>\r
-                          <synonym>Thermoproteus neutrophilus</synonym>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">397948</id>\r
-                      <code>CALMQ</code>\r
-                      <scientific_name>Caldivirga maquilingensis (strain ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167)</scientific_name>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <name>a_80</name>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">118883</id>\r
-                    <scientific_name>Sulfolobaceae</scientific_name>\r
-                    <rank>family</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <name>a_78</name>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">2284</id>\r
-                      <scientific_name>Sulfolobus</scientific_name>\r
-                      <rank>genus</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <name>a_76</name>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">2285</id>\r
-                          <code>SULAC</code>\r
-                          <scientific_name>Sulfolobus acidocaldarius</scientific_name>\r
-                          <rank>species</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">273063</id>\r
-                          <code>SULTO</code>\r
-                          <scientific_name>Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)</scientific_name>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">2287</id>\r
-                        <code>SULSO</code>\r
-                        <scientific_name>Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)</scientific_name>\r
-                        <synonym>Sulfolobus solfataricus P2</synonym>\r
-                        <rank>strain</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">399549</id>\r
-                      <code>METS5</code>\r
-                      <scientific_name>Metallosphaera sedula (strain ATCC 51363 / DSM 5348)</scientific_name>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">56636</id>\r
-                  <code>AERPE</code>\r
-                  <scientific_name>Aeropyrum pernix</scientific_name>\r
-                  <rank>species</rank>\r
-                </taxonomy>\r
-              </clade>\r
-            </clade>\r
-            <clade>\r
-              <name>a_90</name>\r
-              <clade>\r
-                <name>a_88</name>\r
-                <clade>\r
-                  <name>a_86</name>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">399550</id>\r
-                      <code>STAMF</code>\r
-                      <scientific_name>Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)</scientific_name>\r
-                    </taxonomy>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">368408</id>\r
-                      <code>THEPD</code>\r
-                      <scientific_name>Thermofilum pendens (strain Hrk 5)</scientific_name>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">415426</id>\r
-                    <code>HYPBU</code>\r
-                    <scientific_name>Hyperthermus butylicus (strain DSM 5456 / JCM 9403)</scientific_name>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">453591</id>\r
-                  <code>IGNH4</code>\r
-                  <scientific_name>Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)</scientific_name>\r
-                </taxonomy>\r
-              </clade>\r
-            </clade>\r
-          </clade>\r
-          <clade>\r
-            <taxonomy>\r
-              <id provider="uniprot">374847</id>\r
-              <code>KORCO</code>\r
-              <scientific_name>Korarchaeum cryptofilum (strain OPF8)</scientific_name>\r
-            </taxonomy>\r
-          </clade>\r
-        </clade>\r
-      </clade>\r
-    </clade>\r
-    <clade>\r
-      <taxonomy>\r
-        <id provider="uniprot">2</id>\r
-        <scientific_name>Bacteria</scientific_name>\r
-        <rank>superkingdom</rank>\r
-      </taxonomy>\r
-      <clade>\r
-        <name>b_278</name>\r
-        <clade>\r
-          <name>b_268</name>\r
-          <clade>\r
-            <name>b_226</name>\r
-            <clade>\r
-              <name>b_200</name>\r
-              <clade>\r
-                <name>b_194</name>\r
-                <clade>\r
-                  <name>b_104</name>\r
-                  <clade>\r
-                    <name>b_80</name>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">1224</id>\r
-                        <scientific_name>Proteobacteria</scientific_name>\r
-                        <rank>phylum</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <name>b_52</name>\r
-                        <clade>\r
-                          <name>b_44</name>\r
-                          <clade>\r
-                            <name>b_30</name>\r
-                            <clade>\r
-                              <name>b_24</name>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">1236</id>\r
-                                <scientific_name>Gammaproteobacteria</scientific_name>\r
-                                <rank>class</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <name>b_16</name>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">543</id>\r
-                                    <scientific_name>Enterobacteriaceae</scientific_name>\r
-                                    <rank>family</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <name>b_8</name>\r
-                                    <clade>\r
-                                      <name>b_6</name>\r
-                                      <clade>\r
-                                        <name>b_4</name>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">561</id>\r
-                                            <scientific_name>Escherichia</scientific_name>\r
-                                            <rank>genus</rank>\r
-                                          </taxonomy>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">83333</id>\r
-                                              <code>ECOLI</code>\r
-                                              <scientific_name>Escherichia coli (strain K12)</scientific_name>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                          <clade>\r
-                                            <taxonomy>\r
-                                              <id provider="uniprot">83334</id>\r
-                                              <code>ECO57</code>\r
-                                              <scientific_name>Escherichia coli O157:H7</scientific_name>\r
-                                            </taxonomy>\r
-                                          </clade>\r
-                                        </clade>\r
-                                        <clade>\r
-                                          <taxonomy>\r
-                                            <id provider="uniprot">623</id>\r
-                                            <code>SHIFL</code>\r
-                                            <scientific_name>Shigella flexneri</scientific_name>\r
-                                            <rank>species</rank>\r
-                                          </taxonomy>\r
-                                        </clade>\r
-                                      </clade>\r
-                                      <clade>\r
-                                        <taxonomy>\r
-                                          <id provider="uniprot">90371</id>\r
-                                          <code>SALTY</code>\r
-                                          <scientific_name>Salmonella typhimurium</scientific_name>\r
-                                        </taxonomy>\r
-                                      </clade>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">632</id>\r
-                                        <code>YERPE</code>\r
-                                        <scientific_name>Yersinia pestis</scientific_name>\r
-                                        <rank>species</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">29488</id>\r
-                                      <code>PHOLU</code>\r
-                                      <scientific_name>Photorhabdus luminescens</scientific_name>\r
-                                      <synonym>Xenorhabdus luminescens</synonym>\r
-                                      <rank>species</rank>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <name>b_15</name>\r
-                                  <clade>\r
-                                    <name>b_13</name>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">641</id>\r
-                                      <scientific_name>Vibrionaceae</scientific_name>\r
-                                      <rank>family</rank>\r
-                                    </taxonomy>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">74109</id>\r
-                                        <code>PHOPR</code>\r
-                                        <scientific_name>Photobacterium profundum</scientific_name>\r
-                                        <synonym>Photobacterium sp. (strain SS9)</synonym>\r
-                                        <rank>species</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">666</id>\r
-                                        <code>VIBCH</code>\r
-                                        <scientific_name>Vibrio cholerae</scientific_name>\r
-                                        <rank>species</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">318161</id>\r
-                                      <code>SHEDO</code>\r
-                                      <scientific_name>Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)</scientific_name>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <name>b_23</name>\r
-                                <clade>\r
-                                  <name>b_21</name>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">286</id>\r
-                                    <scientific_name>Pseudomonas</scientific_name>\r
-                                    <rank>genus</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <name>b_19</name>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">220664</id>\r
-                                        <code>PSEF5</code>\r
-                                        <scientific_name>Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)</scientific_name>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">205922</id>\r
-                                        <code>PSEPF</code>\r
-                                        <scientific_name>Pseudomonas fluorescens (strain Pf0-1)</scientific_name>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">287</id>\r
-                                      <code>PSEAE</code>\r
-                                      <scientific_name>Pseudomonas aeruginosa</scientific_name>\r
-                                      <rank>species</rank>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">290398</id>\r
-                                    <code>CHRSD</code>\r
-                                    <scientific_name>Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)</scientific_name>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <name>b_29</name>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">28216</id>\r
-                                <scientific_name>Betaproteobacteria</scientific_name>\r
-                                <rank>class</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">159087</id>\r
-                                  <code>DECAR</code>\r
-                                  <scientific_name>Dechloromonas aromatica (strain RCB)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">266264</id>\r
-                                  <code>RALME</code>\r
-                                  <scientific_name>Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <name>b_43</name>\r
-                            <clade>\r
-                              <name>b_41</name>\r
-                              <clade>\r
-                                <name>b_35</name>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">28216</id>\r
-                                  <scientific_name>Betaproteobacteria</scientific_name>\r
-                                  <rank>class</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <name>b_33</name>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">206379</id>\r
-                                    <scientific_name>Nitrosomonadaceae</scientific_name>\r
-                                    <rank>family</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">915</id>\r
-                                      <code>NITEU</code>\r
-                                      <scientific_name>Nitrosomonas europaea</scientific_name>\r
-                                      <rank>species</rank>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">323848</id>\r
-                                      <code>NITMU</code>\r
-                                      <scientific_name>Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)</scientific_name>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">36861</id>\r
-                                    <code>THIDE</code>\r
-                                    <scientific_name>Thiobacillus denitrificans</scientific_name>\r
-                                    <rank>species</rank>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <name>b_40</name>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">135613</id>\r
-                                  <scientific_name>Chromatiales</scientific_name>\r
-                                  <rank>order</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <name>b_38</name>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">72276</id>\r
-                                    <scientific_name>Ectothiorhodospiraceae</scientific_name>\r
-                                    <common_name>purple sulfur bacteria</common_name>\r
-                                    <rank>family</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">187272</id>\r
-                                      <code>ALHEH</code>\r
-                                      <scientific_name>Alkalilimnicola ehrlichei (strain MLHE-1)</scientific_name>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">349124</id>\r
-                                      <code>HALHL</code>\r
-                                      <scientific_name>Halorhodospira halophila (strain DSM 244 / SL1)</scientific_name>\r
-                                      <synonym>Ectothiorhodospira halophila (strain DSM 244 / SL1)</synonym>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">323261</id>\r
-                                    <code>NITOC</code>\r
-                                    <scientific_name>Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)</scientific_name>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">317025</id>\r
-                                <code>THICR</code>\r
-                                <scientific_name>Thiomicrospira crunogena (strain XCL-2)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <name>b_51</name>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">1236</id>\r
-                            <scientific_name>Gammaproteobacteria</scientific_name>\r
-                            <rank>class</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <name>b_47</name>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">135577</id>\r
-                                <code>IDILO</code>\r
-                                <scientific_name>Idiomarina loihiensis</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">446</id>\r
-                                <code>LEGPN</code>\r
-                                <scientific_name>Legionella pneumophila</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <name>b_50</name>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">32033</id>\r
-                              <scientific_name>Xanthomonadaceae</scientific_name>\r
-                              <rank>family</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">190486</id>\r
-                                <code>XANAC</code>\r
-                                <scientific_name>Xanthomonas axonopodis pv. citri (strain 306)</scientific_name>\r
-                                <synonym>Xanthomonas citri pv. citri str. 306</synonym>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">183190</id>\r
-                                <code>XYLFT</code>\r
-                                <scientific_name>Xylella fastidiosa (strain Temecula1 / ATCC 700964)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <name>b_71</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">28211</id>\r
-                          <scientific_name>Alphaproteobacteria</scientific_name>\r
-                          <rank>class</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <name>b_67</name>\r
-                          <clade>\r
-                            <name>b_65</name>\r
-                            <clade>\r
-                              <name>b_61</name>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">356</id>\r
-                                <scientific_name>Rhizobiales</scientific_name>\r
-                                <rank>order</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <name>b_57</name>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">227290</id>\r
-                                  <scientific_name>Rhizobium/Agrobacterium group</scientific_name>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">176299</id>\r
-                                    <code>AGRT5</code>\r
-                                    <scientific_name>Agrobacterium tumefaciens (strain C58 / ATCC 33970)</scientific_name>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">347834</id>\r
-                                    <code>RHIEC</code>\r
-                                    <scientific_name>Rhizobium etli (strain CFN 42 / ATCC 51251)</scientific_name>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <name>b_60</name>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">41294</id>\r
-                                  <scientific_name>Bradyrhizobiaceae</scientific_name>\r
-                                  <rank>family</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">375</id>\r
-                                    <code>BRAJA</code>\r
-                                    <scientific_name>Bradyrhizobium japonicum</scientific_name>\r
-                                    <rank>species</rank>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">395960</id>\r
-                                    <code>RHOPT</code>\r
-                                    <scientific_name>Rhodopseudomonas palustris (strain TIE-1)</scientific_name>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <name>b_64</name>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">31989</id>\r
-                                <scientific_name>Rhodobacteraceae</scientific_name>\r
-                                <rank>family</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">349101</id>\r
-                                  <code>RHOS1</code>\r
-                                  <scientific_name>Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">375451</id>\r
-                                  <code>ROSDO</code>\r
-                                  <scientific_name>Roseobacter denitrificans (strain ATCC 33942 / OCh 114)</scientific_name>\r
-                                  <common_name>Erythrobacter sp. (strain OCh 114)</common_name>\r
-                                  <synonym>Roseobacter denitrificans</synonym>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">155892</id>\r
-                              <code>CAUCR</code>\r
-                              <scientific_name>Caulobacter crescentus</scientific_name>\r
-                              <synonym>Caulobacter vibrioides</synonym>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <name>b_70</name>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">204441</id>\r
-                            <scientific_name>Rhodospirillales</scientific_name>\r
-                            <rank>order</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">524</id>\r
-                              <code>ACICY</code>\r
-                              <scientific_name>Acidiphilium cryptum</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">1085</id>\r
-                              <code>RHORU</code>\r
-                              <scientific_name>Rhodospirillum rubrum</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <name>b_79</name>\r
-                      <clade>\r
-                        <name>b_77</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">1224</id>\r
-                          <scientific_name>Proteobacteria</scientific_name>\r
-                          <rank>phylum</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <name>b_75</name>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">712</id>\r
-                            <scientific_name>Pasteurellaceae</scientific_name>\r
-                            <rank>family</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">727</id>\r
-                              <code>HAEIN</code>\r
-                              <scientific_name>Haemophilus influenzae</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">747</id>\r
-                              <code>PASMU</code>\r
-                              <scientific_name>Pasteurella multocida</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">487</id>\r
-                            <code>NEIME</code>\r
-                            <scientific_name>Neisseria meningitidis</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">905</id>\r
-                          <code>ACIFE</code>\r
-                          <scientific_name>Acidaminococcus fermentans</scientific_name>\r
-                          <rank>species</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <name>b_103</name>\r
-                    <clade>\r
-                      <name>b_91</name>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">28221</id>\r
-                        <scientific_name>Deltaproteobacteria</scientific_name>\r
-                        <rank>class</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <name>b_87</name>\r
-                        <clade>\r
-                          <name>b_83</name>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">84980</id>\r
-                              <code>DESPS</code>\r
-                              <scientific_name>Desulfotalea psychrophila</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">876</id>\r
-                              <code>DESDE</code>\r
-                              <scientific_name>Desulfovibrio desulfuricans</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">56780</id>\r
-                            <code>SYNAS</code>\r
-                            <scientific_name>Syntrophus aciditrophicus (strain SB)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <name>b_90</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">28231</id>\r
-                          <scientific_name>Geobacter</scientific_name>\r
-                          <rank>genus</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">28232</id>\r
-                            <code>GEOME</code>\r
-                            <scientific_name>Geobacter metallireducens</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">35554</id>\r
-                            <code>GEOSL</code>\r
-                            <scientific_name>Geobacter sulfurreducens</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <name>b_102</name>\r
-                      <clade>\r
-                        <name>b_98</name>\r
-                        <clade>\r
-                          <name>b_94</name>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">31</id>\r
-                            <scientific_name>Myxococcaceae</scientific_name>\r
-                            <rank>family</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">290397</id>\r
-                              <code>ANADE</code>\r
-                              <scientific_name>Anaeromyxobacter dehalogenans (strain 2CP-C)</scientific_name>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">34</id>\r
-                              <code>MYXXA</code>\r
-                              <scientific_name>Myxococcus xanthus</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <name>b_97</name>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">57723</id>\r
-                            <scientific_name>Acidobacteria</scientific_name>\r
-                            <rank>phylum</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">204669</id>\r
-                              <code>ACIBL</code>\r
-                              <scientific_name>Acidobacteria bacterium (strain Ellin345)</scientific_name>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">332163</id>\r
-                              <code>SOLUS</code>\r
-                              <scientific_name>Solibacter usitatus</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">265606</id>\r
-                          <code>RHOBA</code>\r
-                          <scientific_name>Rhodopirellula baltica</scientific_name>\r
-                          <rank>species</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <name>b_193</name>\r
-                  <clade>\r
-                    <name>b_163</name>\r
-                    <clade>\r
-                      <name>b_133</name>\r
-                      <clade>\r
-                        <name>Chloroflexi &amp; Actinobacteria</name>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">201174</id>\r
-                            <scientific_name>Actinobacteria</scientific_name>\r
-                            <rank>phylum</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">2037</id>\r
-                              <scientific_name>Actinomycetales</scientific_name>\r
-                              <rank>order</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <name>b_115</name>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">266940</id>\r
-                                  <code>KINRD</code>\r
-                                  <scientific_name>Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">378753</id>\r
-                                  <code>KOCRD</code>\r
-                                  <scientific_name>Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">1032480</id>\r
-                                  <code>MICPN</code>\r
-                                  <scientific_name>Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1)</scientific_name>\r
-                                  <common_name>Microlunatus phosphovorus NM-1</common_name>\r
-                                  <rank>strain</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">1902</id>\r
-                                  <code>STRCO</code>\r
-                                  <scientific_name>Streptomyces coelicolor</scientific_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">269800</id>\r
-                                  <code>THEFY</code>\r
-                                  <scientific_name>Thermobifida fusca (strain YX)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">85007</id>\r
-                                <scientific_name>Corynebacterineae</scientific_name>\r
-                                <rank>suborder</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">1763</id>\r
-                                  <scientific_name>Mycobacterium</scientific_name>\r
-                                  <rank>genus</rank>\r
-                                </taxonomy>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">1769</id>\r
-                                    <code>MYCLE</code>\r
-                                    <scientific_name>Mycobacterium leprae</scientific_name>\r
-                                    <rank>species</rank>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">1773</id>\r
-                                    <code>MYCTU</code>\r
-                                    <scientific_name>Mycobacterium tuberculosis</scientific_name>\r
-                                    <rank>species</rank>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">306537</id>\r
-                                  <code>CORJK</code>\r
-                                  <scientific_name>Corynebacterium jeikeium (strain K411)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">632772</id>\r
-                                  <code>RHOOB</code>\r
-                                  <scientific_name>Rhodococcus opacus (strain B4)</scientific_name>\r
-                                  <rank>strain</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">266117</id>\r
-                              <code>RUBXD</code>\r
-                              <scientific_name>Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)</scientific_name>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">200795</id>\r
-                            <scientific_name>Chloroflexi</scientific_name>\r
-                            <common_name>GNS bacteria</common_name>\r
-                            <synonym>Thermomicrobia</synonym>\r
-                            <rank>phylum</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">32061</id>\r
-                              <scientific_name>Chloroflexi (class)</scientific_name>\r
-                              <synonym>Chloroflecales</synonym>\r
-                              <synonym>Chloroflexus/Deinococcus group</synonym>\r
-                              <rank>class</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">1106</id>\r
-                                <scientific_name>Chloroflexaceae</scientific_name>\r
-                                <common_name>filamentous anoxygenic phototrophic bacteria</common_name>\r
-                                <rank>family</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">1108</id>\r
-                                  <code>CHLAU</code>\r
-                                  <scientific_name>Chloroflexus aurantiacus</scientific_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">383372</id>\r
-                                  <code>ROSCS</code>\r
-                                  <scientific_name>Roseiflexus castenholzii (strain DSM 13941 / HLO8)</scientific_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">65</id>\r
-                                <code>HERAU</code>\r
-                                <scientific_name>Herpetosiphon aurantiacus</scientific_name>\r
-                                <synonym>Herpetosiphon giganteus</synonym>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">479434</id>\r
-                              <code>SPHTD</code>\r
-                              <scientific_name>Sphaerobacter thermophilus (strain DSM 20745 / S 6022)</scientific_name>\r
-                              <rank>strain</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <name>b_132</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">188787</id>\r
-                          <scientific_name>Deinococci</scientific_name>\r
-                          <rank>class</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">1298</id>\r
-                            <scientific_name>Deinococcus</scientific_name>\r
-                            <rank>genus</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">319795</id>\r
-                              <code>DEIGD</code>\r
-                              <scientific_name>Deinococcus geothermalis (strain DSM 11300)</scientific_name>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">1299</id>\r
-                              <code>DEIRA</code>\r
-                              <scientific_name>Deinococcus radiodurans</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">300852</id>\r
-                            <code>THET8</code>\r
-                            <scientific_name>Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)</scientific_name>\r
-                            <rank>strain</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <name>b_162</name>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">1117</id>\r
-                        <scientific_name>Cyanobacteria</scientific_name>\r
-                        <rank>phylum</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <name>b_154</name>\r
-                        <clade>\r
-                          <name>b_152</name>\r
-                          <clade>\r
-                            <name>b_146</name>\r
-                            <clade>\r
-                              <name>b_144</name>\r
-                              <clade>\r
-                                <name>b_142</name>\r
-                                <clade>\r
-                                  <name>b_138</name>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">1162</id>\r
-                                    <scientific_name>Nostocaceae</scientific_name>\r
-                                    <rank>family</rank>\r
-                                  </taxonomy>\r
-                                  <clade>\r
-                                    <name>b_136</name>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">240292</id>\r
-                                        <code>ANAVT</code>\r
-                                        <scientific_name>Anabaena variabilis (strain ATCC 29413 / PCC 7937)</scientific_name>\r
-                                        <synonym>Anabaena flos-aquae (strain IUCC 1444)</synonym>\r
-                                        <rank>strain</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                    <clade>\r
-                                      <taxonomy>\r
-                                        <id provider="uniprot">28072</id>\r
-                                        <code>NOSS7</code>\r
-                                        <scientific_name>Nostoc sp. (strain ATCC 29411 / PCC 7524)</scientific_name>\r
-                                        <rank>species</rank>\r
-                                      </taxonomy>\r
-                                    </clade>\r
-                                  </clade>\r
-                                  <clade>\r
-                                    <taxonomy>\r
-                                      <id provider="uniprot">63737</id>\r
-                                      <code>NOSP7</code>\r
-                                      <scientific_name>Nostoc punctiforme (strain ATCC 29133 / PCC 73102)</scientific_name>\r
-                                      <rank>strain</rank>\r
-                                    </taxonomy>\r
-                                  </clade>\r
-                                </clade>\r
-                                <clade>\r
-                                  <taxonomy>\r
-                                    <id provider="uniprot">329726</id>\r
-                                    <code>ACAM1</code>\r
-                                    <scientific_name>Acaryochloris marina (strain MBIC 11017</scientific_name>\r
-                                    <rank>strain</rank>\r
-                                  </taxonomy>\r
-                                </clade>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">449447</id>\r
-                                  <code>MICAN</code>\r
-                                  <scientific_name>Microcystis aeruginosa (strain NIES-843)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">1206</id>\r
-                                <code>TRIER</code>\r
-                                <scientific_name>Trichodesmium erythraeum</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">1118</id>\r
-                              <scientific_name>Chroococcales</scientific_name>\r
-                              <rank>order</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">32046</id>\r
-                                <code>SYNEL</code>\r
-                                <scientific_name>Synechococcus elongatus</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">1111708</id>\r
-                                <code>SYNY3</code>\r
-                                <scientific_name>Synechocystis sp. (strain PCC 6803 / Kazusa)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">33072</id>\r
-                            <code>GLOVI</code>\r
-                            <scientific_name>Gloeobacter violaceus</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <name>b_161</name>\r
-                        <clade>\r
-                          <name>b_159</name>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">1218</id>\r
-                            <scientific_name>Prochlorococcus</scientific_name>\r
-                            <rank>genus</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <name>b_157</name>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">1219</id>\r
-                                <code>PROMA</code>\r
-                                <scientific_name>Prochlorococcus marinus</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">59919</id>\r
-                                <code>PROMP</code>\r
-                                <scientific_name>Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">74547</id>\r
-                              <code>PROMM</code>\r
-                              <scientific_name>Prochlorococcus marinus (strain MIT 9313)</scientific_name>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">64471</id>\r
-                            <code>SYNS3</code>\r
-                            <scientific_name>Synechococcus sp. (strain CC9311)</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <name>b_192</name>\r
-                    <clade>\r
-                      <name>b_190</name>\r
-                      <clade>\r
-                        <name>b_178</name>\r
-                        <clade>\r
-                          <name>b_176</name>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">191412</id>\r
-                            <scientific_name>Chlorobiaceae</scientific_name>\r
-                            <rank>family</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <name>b_170</name>\r
-                            <clade>\r
-                              <name>b_166</name>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">331678</id>\r
-                                  <code>CHLPB</code>\r
-                                  <scientific_name>Chlorobium phaeobacteroides (strain BS1)</scientific_name>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">1102</id>\r
-                                  <code>PROAE</code>\r
-                                  <scientific_name>Prosthecochloris aestuarii</scientific_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <name>b_169</name>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">274493</id>\r
-                                <scientific_name>Chlorobium/Pelodictyon group</scientific_name>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">1100</id>\r
-                                  <code>PELLU</code>\r
-                                  <scientific_name>Pelodictyon luteolum</scientific_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">290318</id>\r
-                                  <code>PROVI</code>\r
-                                  <scientific_name>Prosthecochloris vibrioformis (strain DSM 265)</scientific_name>\r
-                                  <common_name>Chlorobium vibrioforme subsp. thiosulfatophilum (strain DSM 265)</common_name>\r
-                                  <synonym>Chlorobium phaeovibrioides (strain DSM 265)</synonym>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <name>b_175</name>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">256319</id>\r
-                                <scientific_name>Chlorobaculum</scientific_name>\r
-                                <rank>genus</rank>\r
-                              </taxonomy>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">517417</id>\r
-                                  <code>CHLP8</code>\r
-                                  <scientific_name>Chlorobaculum parvum (strain NCIB 8327)</scientific_name>\r
-                                  <synonym>Chlorobium vibrioforme subsp. thiosulfatophilum (strain DSM 263 / NCIB 8327)</synonym>\r
-                                </taxonomy>\r
-                              </clade>\r
-                              <clade>\r
-                                <taxonomy>\r
-                                  <id provider="uniprot">1097</id>\r
-                                  <code>CHLTE</code>\r
-                                  <scientific_name>Chlorobium tepidum</scientific_name>\r
-                                  <rank>species</rank>\r
-                                </taxonomy>\r
-                              </clade>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">340177</id>\r
-                                <code>CHLCH</code>\r
-                                <scientific_name>Chlorobium chlorochromatii (strain CaD3)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">315277</id>\r
-                            <code>CHLTA</code>\r
-                            <scientific_name>Chlamydia trachomatis serovar A (strain HAR-13 / ATCC VR-571B)</scientific_name>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <name>b_189</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">976</id>\r
-                          <scientific_name>Bacteroidetes</scientific_name>\r
-                          <rank>phylum</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <name>b_183</name>\r
-                          <clade>\r
-                            <name>b_181</name>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">49546</id>\r
-                              <scientific_name>Flavobacteriaceae</scientific_name>\r
-                              <rank>family</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">986</id>\r
-                                <code>FLAJO</code>\r
-                                <scientific_name>Flavobacterium johnsoniae</scientific_name>\r
-                                <synonym>Cytophaga johnsonae</synonym>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">411154</id>\r
-                                <code>GRAFK</code>\r
-                                <scientific_name>Gramella forsetii (strain KT0803)</scientific_name>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">269798</id>\r
-                              <code>CYTH3</code>\r
-                              <scientific_name>Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)</scientific_name>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <name>b_188</name>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">171549</id>\r
-                            <scientific_name>Bacteroidales</scientific_name>\r
-                            <rank>order</rank>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <name>b_186</name>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">816</id>\r
-                              <scientific_name>Bacteroides</scientific_name>\r
-                              <rank>genus</rank>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">817</id>\r
-                                <code>BACFR</code>\r
-                                <scientific_name>Bacteroides fragilis</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">818</id>\r
-                                <code>BACTN</code>\r
-                                <scientific_name>Bacteroides thetaiotaomicron</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">837</id>\r
-                              <code>PORGI</code>\r
-                              <scientific_name>Porphyromonas gingivalis</scientific_name>\r
-                              <synonym>Bacteroides gingivalis</synonym>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">309807</id>\r
-                        <code>SALRD</code>\r
-                        <scientific_name>Salinibacter ruber (strain DSM 13855 / M31)</scientific_name>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <name>b_199</name>\r
-                <clade>\r
-                  <name>b_197</name>\r
-                  <taxonomy>\r
-                    <scientific_name>Verrucomicrobia</scientific_name>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">349741</id>\r
-                      <code>AKKM8</code>\r
-                      <scientific_name>Akkermansia muciniphila (strain ATCC BAA-835)</scientific_name>\r
-                    </taxonomy>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">481448</id>\r
-                      <code>METI4</code>\r
-                      <scientific_name>Methylacidiphilum infernorum (isolate V4)</scientific_name>\r
-                      <synonym>Methylokorus infernorum (strain V4)</synonym>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">44275</id>\r
-                    <code>LEPIC</code>\r
-                    <scientific_name>Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni</scientific_name>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-            </clade>\r
-            <clade>\r
-              <name>b_225</name>\r
-              <clade>\r
-                <name>b_219</name>\r
-                <taxonomy>\r
-                  <id provider="uniprot">1239</id>\r
-                  <scientific_name>Firmicutes</scientific_name>\r
-                  <rank>phylum</rank>\r
-                </taxonomy>\r
-                <clade>\r
-                  <name>b_213</name>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">1385</id>\r
-                      <scientific_name>Bacillales</scientific_name>\r
-                      <rank>order</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">186817</id>\r
-                        <scientific_name>Bacillaceae</scientific_name>\r
-                        <rank>family</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">1386</id>\r
-                          <scientific_name>Bacillus</scientific_name>\r
-                          <rank>genus</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">86661</id>\r
-                            <scientific_name>Bacillus cereus group</scientific_name>\r
-                          </taxonomy>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">1392</id>\r
-                              <code>BACAN</code>\r
-                              <scientific_name>Bacillus anthracis</scientific_name>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">572264</id>\r
-                              <code>BACC3</code>\r
-                              <scientific_name>Bacillus cereus (strain 03BB102)</scientific_name>\r
-                              <rank>strain</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">224308</id>\r
-                            <code>BACSU</code>\r
-                            <scientific_name>Bacillus subtilis (strain 168)</scientific_name>\r
-                            <synonym>Bacillus subtilis subsp. subtilis str. 168</synonym>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <name>b_206</name>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">86665</id>\r
-                            <code>BACHD</code>\r
-                            <scientific_name>Bacillus halodurans</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">1462</id>\r
-                            <code>GEOKA</code>\r
-                            <scientific_name>Geobacillus kaustophilus</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <name>b_210</name>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">1639</id>\r
-                          <code>LISMO</code>\r
-                          <scientific_name>Listeria monocytogenes</scientific_name>\r
-                          <rank>species</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">1280</id>\r
-                          <code>STAAU</code>\r
-                          <scientific_name>Staphylococcus aureus</scientific_name>\r
-                          <rank>species</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">195103</id>\r
-                      <code>CLOP1</code>\r
-                      <scientific_name>Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A)</scientific_name>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <name>Clostridia</name>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">186801</id>\r
-                    <scientific_name>Clostridia</scientific_name>\r
-                    <rank>class</rank>\r
-                  </taxonomy>\r
-                  <clade>\r
-                    <name>b_218</name>\r
-                    <clade>\r
-                      <name>b_216</name>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">186814</id>\r
-                        <scientific_name>Thermoanaerobacteriaceae</scientific_name>\r
-                        <rank>family</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">246194</id>\r
-                          <code>CARHZ</code>\r
-                          <scientific_name>Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)</scientific_name>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">119072</id>\r
-                          <code>THETN</code>\r
-                          <scientific_name>Thermoanaerobacter tengcongensis</scientific_name>\r
-                          <rank>species</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">49338</id>\r
-                        <code>DESHA</code>\r
-                        <scientific_name>Desulfitobacterium hafniense</scientific_name>\r
-                        <synonym>Desulfitobacterium frappieri</synonym>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">515619</id>\r
-                      <code>EUBR3</code>\r
-                      <scientific_name>Eubacterium rectale (strain ATCC 33656 / VPI 0990)</scientific_name>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <name>b_224</name>\r
-                <taxonomy>\r
-                  <id provider="uniprot">188709</id>\r
-                  <scientific_name>Thermotogaceae</scientific_name>\r
-                  <rank>family</rank>\r
-                </taxonomy>\r
-                <clade>\r
-                  <name>b_222</name>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">381764</id>\r
-                      <code>FERNB</code>\r
-                      <scientific_name>Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)</scientific_name>\r
-                    </taxonomy>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">416591</id>\r
-                      <code>THELT</code>\r
-                      <scientific_name>Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)</scientific_name>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">2336</id>\r
-                    <code>THEMA</code>\r
-                    <scientific_name>Thermotoga maritima</scientific_name>\r
-                    <rank>species</rank>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-            </clade>\r
-          </clade>\r
-          <clade>\r
-            <name>b_267</name>\r
-            <clade>\r
-              <name>b_263</name>\r
-              <clade>\r
-                <name>b_251</name>\r
-                <clade>\r
-                  <name>b_249</name>\r
-                  <clade>\r
-                    <name>b_245</name>\r
-                    <clade>\r
-                      <name>b_237</name>\r
-                      <clade>\r
-                        <name>b_233</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">31969</id>\r
-                          <scientific_name>Mollicutes</scientific_name>\r
-                          <rank>class</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <name>b_231</name>\r
-                          <clade>\r
-                            <name>b_229</name>\r
-                            <taxonomy>\r
-                              <scientific_name>Mycoplasma</scientific_name>\r
-                            </taxonomy>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">2097</id>\r
-                                <code>MYCGE</code>\r
-                                <scientific_name>Mycoplasma genitalium</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                            <clade>\r
-                              <taxonomy>\r
-                                <id provider="uniprot">2104</id>\r
-                                <code>MYCPN</code>\r
-                                <scientific_name>Mycoplasma pneumoniae</scientific_name>\r
-                                <rank>species</rank>\r
-                              </taxonomy>\r
-                            </clade>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">2151</id>\r
-                              <code>MESFL</code>\r
-                              <scientific_name>Mesoplasma florum</scientific_name>\r
-                              <synonym>Acholeplasma florum</synonym>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">134821</id>\r
-                            <code>UREPA</code>\r
-                            <scientific_name>Ureaplasma parvum</scientific_name>\r
-                            <synonym>Ureaplasma urealyticum biotype 1</synonym>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <name>b_236</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">137</id>\r
-                          <scientific_name>Spirochaetaceae</scientific_name>\r
-                          <rank>family</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">139</id>\r
-                            <code>BORBU</code>\r
-                            <scientific_name>Borrelia burgdorferi</scientific_name>\r
-                            <common_name>Lyme disease spirochete</common_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">160</id>\r
-                            <code>TREPA</code>\r
-                            <scientific_name>Treponema pallidum</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <name>b_244</name>\r
-                      <clade>\r
-                        <name>b_242</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">1113537</id>\r
-                          <scientific_name>Chlamydia/Chlamydophila group</scientific_name>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <name>b_240</name>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">83558</id>\r
-                              <code>CHLPN</code>\r
-                              <scientific_name>Chlamydia pneumoniae</scientific_name>\r
-                              <synonym>Chlamydophila pneumoniae</synonym>\r
-                              <rank>species</rank>\r
-                            </taxonomy>\r
-                          </clade>\r
-                          <clade>\r
-                            <taxonomy>\r
-                              <id provider="uniprot">264202</id>\r
-                              <code>CHLFF</code>\r
-                              <scientific_name>Chlamydophila felis (strain Fe/C-56)</scientific_name>\r
-                            </taxonomy>\r
-                          </clade>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">83560</id>\r
-                            <code>CHLMU</code>\r
-                            <scientific_name>Chlamydia muridarum</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">785</id>\r
-                          <code>RICTY</code>\r
-                          <scientific_name>Rickettsia typhi</scientific_name>\r
-                          <rank>species</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">28211</id>\r
-                      <scientific_name>Alphaproteobacteria</scientific_name>\r
-                      <rank>class</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">38323</id>\r
-                        <code>BARHE</code>\r
-                        <scientific_name>Bartonella henselae</scientific_name>\r
-                        <synonym>Rochalimaea henselae</synonym>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">198252</id>\r
-                        <code>PELUB</code>\r
-                        <scientific_name>Pelagibacter ubique</scientific_name>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">780</id>\r
-                        <scientific_name>Rickettsia</scientific_name>\r
-                        <rank>genus</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">391896</id>\r
-                          <code>RICB8</code>\r
-                          <scientific_name>Rickettsia bellii (strain OSU 85-389)</scientific_name>\r
-                        </taxonomy>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">452659</id>\r
-                          <code>RICRO</code>\r
-                          <scientific_name>Rickettsia rickettsii (strain Iowa)</scientific_name>\r
-                          <rank>strain</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">263</id>\r
-                    <code>FRATU</code>\r
-                    <scientific_name>Francisella tularensis</scientific_name>\r
-                    <rank>species</rank>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-              <clade>\r
-                <name>b_262</name>\r
-                <clade>\r
-                  <name>b_260</name>\r
-                  <clade>\r
-                    <name>b_258</name>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">186826</id>\r
-                      <scientific_name>Lactobacillales</scientific_name>\r
-                      <rank>order</rank>\r
-                    </taxonomy>\r
-                    <clade>\r
-                      <name>b_256</name>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">1300</id>\r
-                        <scientific_name>Streptococcaceae</scientific_name>\r
-                        <rank>family</rank>\r
-                      </taxonomy>\r
-                      <clade>\r
-                        <name>b_254</name>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">1301</id>\r
-                          <scientific_name>Streptococcus</scientific_name>\r
-                          <rank>genus</rank>\r
-                        </taxonomy>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">1313</id>\r
-                            <code>STRPN</code>\r
-                            <scientific_name>Streptococcus pneumoniae</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                        <clade>\r
-                          <taxonomy>\r
-                            <id provider="uniprot">1314</id>\r
-                            <code>STRPY</code>\r
-                            <scientific_name>Streptococcus pyogenes</scientific_name>\r
-                            <rank>species</rank>\r
-                          </taxonomy>\r
-                        </clade>\r
-                      </clade>\r
-                      <clade>\r
-                        <taxonomy>\r
-                          <id provider="uniprot">1360</id>\r
-                          <code>LACLA</code>\r
-                          <scientific_name>Lactococcus lactis subsp. lactis</scientific_name>\r
-                          <synonym>Streptococcus lactis</synonym>\r
-                          <rank>subspecies</rank>\r
-                        </taxonomy>\r
-                      </clade>\r
-                    </clade>\r
-                    <clade>\r
-                      <taxonomy>\r
-                        <id provider="uniprot">1579</id>\r
-                        <code>LACAC</code>\r
-                        <scientific_name>Lactobacillus acidophilus</scientific_name>\r
-                        <rank>species</rank>\r
-                      </taxonomy>\r
-                    </clade>\r
-                  </clade>\r
-                  <clade>\r
-                    <taxonomy>\r
-                      <id provider="uniprot">216816</id>\r
-                      <code>BIFLO</code>\r
-                      <scientific_name>Bifidobacterium longum</scientific_name>\r
-                      <rank>species</rank>\r
-                    </taxonomy>\r
-                  </clade>\r
-                </clade>\r
-                <clade>\r
-                  <taxonomy>\r
-                    <id provider="uniprot">851</id>\r
-                    <code>FUSNU</code>\r
-                    <scientific_name>Fusobacterium nucleatum</scientific_name>\r
-                    <rank>species</rank>\r
-                  </taxonomy>\r
-                </clade>\r
-              </clade>\r
-            </clade>\r
-            <clade>\r
-              <name>b_266</name>\r
-              <taxonomy>\r
-                <id provider="uniprot">61434</id>\r
-                <scientific_name>Dehalococcoides</scientific_name>\r
-                <rank>genus</rank>\r
-              </taxonomy>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">243164</id>\r
-                  <code>DEHE1</code>\r
-                  <scientific_name>Dehalococcoides ethenogenes (strain 195)</scientific_name>\r
-                </taxonomy>\r
-              </clade>\r
-              <clade>\r
-                <taxonomy>\r
-                  <id provider="uniprot">216389</id>\r
-                  <code>DEHSB</code>\r
-                  <scientific_name>Dehalococcoides sp. (strain BAV1)</scientific_name>\r
-                  <rank>species</rank>\r
-                </taxonomy>\r
-              </clade>\r
-            </clade>\r
-          </clade>\r
-        </clade>\r
-        <clade>\r
-          <name>b_277</name>\r
-          <taxonomy>\r
-            <id provider="uniprot">29547</id>\r
-            <scientific_name>Epsilonproteobacteria</scientific_name>\r
-            <rank>class</rank>\r
-          </taxonomy>\r
-          <clade>\r
-            <name>b_273</name>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">387092</id>\r
-                <code>NITSB</code>\r
-                <scientific_name>Nitratiruptor sp. (strain SB155-2)</scientific_name>\r
-                <rank>species</rank>\r
-              </taxonomy>\r
-            </clade>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">387093</id>\r
-                <code>SULNB</code>\r
-                <scientific_name>Sulfurovum sp. (strain NBC37-1)</scientific_name>\r
-                <rank>species</rank>\r
-              </taxonomy>\r
-            </clade>\r
-          </clade>\r
-          <clade>\r
-            <name>b_276</name>\r
-            <taxonomy>\r
-              <id provider="uniprot">213849</id>\r
-              <scientific_name>Campylobacterales</scientific_name>\r
-              <rank>order</rank>\r
-            </taxonomy>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">197</id>\r
-                <code>CAMJE</code>\r
-                <scientific_name>Campylobacter jejuni</scientific_name>\r
-                <rank>species</rank>\r
-              </taxonomy>\r
-            </clade>\r
-            <clade>\r
-              <taxonomy>\r
-                <id provider="uniprot">357544</id>\r
-                <code>HELPH</code>\r
-                <scientific_name>Helicobacter pylori (strain HPAG1)</scientific_name>\r
-              </taxonomy>\r
-            </clade>\r
-          </clade>\r
-        </clade>\r
-      </clade>\r
-      <clade>\r
-        <taxonomy>\r
-          <id provider="uniprot">224324</id>\r
-          <code>AQUAE</code>\r
-          <scientific_name>Aquifex aeolicus (strain VF5)</scientific_name>\r
-          <rank>strain</rank>\r
-        </taxonomy>\r
-      </clade>\r
-    </clade>\r
-  </clade>\r
-</phylogeny>\r
+<?xml version="1.0" encoding="UTF-8"?>
+<phyloxml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd" xmlns="http://www.phyloxml.org">
+<phylogeny rooted="true" rerootable="false">
+  <clade>
+    <taxonomy>
+      <id provider="uniprot">131567</id>
+      <scientific_name>cellular organisms</scientific_name>
+    </taxonomy>
+    <clade>
+      <taxonomy>
+        <scientific_name>Neomura</scientific_name>
+      </taxonomy>
+      <clade>
+        <taxonomy>
+          <id provider="uniprot">2759</id>
+          <scientific_name>Eukaryota</scientific_name>
+          <rank>superkingdom</rank>
+        </taxonomy>
+        <clade>
+          <name>Unikonta</name>
+          <clade>
+            <taxonomy>
+              <id provider="uniprot">33154</id>
+              <scientific_name>Opisthokonta</scientific_name>
+              <common_name>Fungi/Metazoa group</common_name>
+            </taxonomy>
+            <clade>
+              <taxonomy>
+                <scientific_name>Holozoa</scientific_name>
+              </taxonomy>
+              <clade>
+                <name>Choanoflagellatea &amp; Metazoa</name>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">33208</id>
+                    <scientific_name>Metazoa</scientific_name>
+                    <rank>kingdom</rank>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">6072</id>
+                      <scientific_name>Eumetazoa</scientific_name>
+                    </taxonomy>
+                    <reference doi="10.1038/nature06614">
+                    </reference>
+                    <clade>
+                      <name>Bilateria &amp; Cnidaria</name>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">33213</id>
+                          <scientific_name>Bilateria</scientific_name>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">33511</id>
+                            <scientific_name>Deuterostomia</scientific_name>
+                          </taxonomy>
+                          <reference doi="10.1038/nature04336">
+                          </reference>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">7711</id>
+                              <scientific_name>Chordata</scientific_name>
+                              <rank>phylum</rank>
+                            </taxonomy>
+                            <clade>
+                              <name>Urochordata &amp; Vertebrata</name>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">7742</id>
+                                  <scientific_name>Vertebrata</scientific_name>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">7776</id>
+                                    <scientific_name>Gnathostomata</scientific_name>
+                                    <common_name>jawed vertebrates</common_name>
+                                    <rank>superclass</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">117571</id>
+                                      <scientific_name>Euteleostomi</scientific_name>
+                                      <common_name>bony vertebrates</common_name>
+                                    </taxonomy>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">8287</id>
+                                        <scientific_name>Sarcopterygii</scientific_name>
+                                        <common_name>lobe-finned fish</common_name>
+                                      </taxonomy>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">32523</id>
+                                          <scientific_name>Tetrapoda</scientific_name>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">32524</id>
+                                            <scientific_name>Amniota</scientific_name>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">40674</id>
+                                              <scientific_name>Mammalia</scientific_name>
+                                              <rank>class</rank>
+                                            </taxonomy>
+                                            <clade>
+                                              <name>Theria</name>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">9347</id>
+                                                  <scientific_name>Eutheria</scientific_name>
+                                                  <common_name>Placental mammals</common_name>
+                                                </taxonomy>
+                                                <reference doi="10.1002/bies.200900053">
+                                                  <desc>The new framework for understanding placental mammal evolution</desc>
+                                                </reference>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <scientific_name>Boreoeutheria</scientific_name>
+                                                    <synonym>Boreotheria</synonym>
+                                                  </taxonomy>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">314146</id>
+                                                      <scientific_name>Euarchontoglires</scientific_name>
+                                                      <rank>superorder</rank>
+                                                    </taxonomy>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <scientific_name>Euarchonta</scientific_name>
+                                                      </taxonomy>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">9443</id>
+                                                          <scientific_name>Primates</scientific_name>
+                                                          <rank>order</rank>
+                                                        </taxonomy>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">376913</id>
+                                                            <scientific_name>Haplorrhini</scientific_name>
+                                                            <rank>suborder</rank>
+                                                          </taxonomy>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">314293</id>
+                                                              <scientific_name>Simiiformes</scientific_name>
+                                                              <rank>infraorder</rank>
+                                                            </taxonomy>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">9526</id>
+                                                                <scientific_name>Catarrhini</scientific_name>
+                                                              </taxonomy>
+                                                              <clade>
+                                                                <taxonomy>
+                                                                  <id provider="uniprot">314295</id>
+                                                                  <scientific_name>Hominoidea</scientific_name>
+                                                                  <common_name>Apes</common_name>
+                                                                  <rank>superfamily</rank>
+                                                                </taxonomy>
+                                                                <clade>
+                                                                  <taxonomy>
+                                                                    <id provider="uniprot">9604</id>
+                                                                    <scientific_name>Hominidae</scientific_name>
+                                                                    <common_name>Great apes</common_name>
+                                                                    <rank>family</rank>
+                                                                  </taxonomy>
+                                                                  <clade>
+                                                                    <taxonomy>
+                                                                      <id provider="uniprot">207598</id>
+                                                                      <scientific_name>Homininae</scientific_name>
+                                                                      <rank>subfamily</rank>
+                                                                    </taxonomy>
+                                                                    <clade>
+                                                                      <taxonomy>
+                                                                        <scientific_name>Hominini</scientific_name>
+                                                                        <rank>tribe</rank>
+                                                                      </taxonomy>
+                                                                      <clade>
+                                                                        <taxonomy>
+                                                                          <id provider="uniprot">9606</id>
+                                                                          <code>HUMAN</code>
+                                                                          <scientific_name>Homo sapiens</scientific_name>
+                                                                          <common_name>Human</common_name>
+                                                                          <rank>species</rank>
+                                                                          <uri>http://www.thehindu.com/multimedia/dynamic/00029/IN05_DARWIN_29896f.jpg</uri>
+                                                                        </taxonomy>
+                                                                      </clade>
+                                                                      <clade>
+                                                                        <taxonomy>
+                                                                          <id provider="uniprot">9598</id>
+                                                                          <code>PANTR</code>
+                                                                          <scientific_name>Pan troglodytes</scientific_name>
+                                                                          <common_name>Chimpanzee</common_name>
+                                                                          <rank>species</rank>
+                                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/8b/Schimpanse_zoo-leipig.jpg/800px-Schimpanse_zoo-leipig.jpg</uri>
+                                                                        </taxonomy>
+                                                                      </clade>
+                                                                    </clade>
+                                                                    <clade>
+                                                                      <taxonomy>
+                                                                        <id provider="uniprot">9595</id>
+                                                                        <code>GORGO</code>
+                                                                        <scientific_name>Gorilla gorilla gorilla</scientific_name>
+                                                                        <common_name>Western lowland gorilla</common_name>
+                                                                        <rank>subspecies</rank>
+                                                                        <uri>http://upload.wikimedia.org/wikipedia/commons/c/c7/Stavenn_Gorilla_gorilla_00.jpg</uri>
+                                                                      </taxonomy>
+                                                                    </clade>
+                                                                  </clade>
+                                                                  <clade>
+                                                                    <taxonomy>
+                                                                      <id provider="uniprot">9601</id>
+                                                                      <code>PONAB</code>
+                                                                      <scientific_name>Pongo abelii</scientific_name>
+                                                                      <common_name>Sumatran orangutan</common_name>
+                                                                      <synonym>Pongo pygmaeus abelii</synonym>
+                                                                      <rank>species</rank>
+                                                                      <uri>http://www.ism.ac.jp/~hasegawa/photos/animal3b.jpg</uri>
+                                                                    </taxonomy>
+                                                                  </clade>
+                                                                </clade>
+                                                                <clade>
+                                                                  <taxonomy>
+                                                                    <id provider="uniprot">61853</id>
+                                                                    <code>NOMLE</code>
+                                                                    <scientific_name>Nomascus leucogenys</scientific_name>
+                                                                    <common_name>Northern white-cheeked gibbon</common_name>
+                                                                    <synonym>Hylobates leucogenys</synonym>
+                                                                    <synonym>Hylobates concolor leucogenys</synonym>
+                                                                    <rank>species</rank>
+                                                                    <uri>http://uswest.ensembl.org/img/species/pic_Nomascus_leucogenys.png</uri>
+                                                                    <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/1/1b/Hylobates_concolor2.jpg/450px-Hylobates_concolor2.jpg</uri>
+                                                                  </taxonomy>
+                                                                </clade>
+                                                              </clade>
+                                                              <clade>
+                                                                <taxonomy>
+                                                                  <id provider="uniprot">9528</id>
+                                                                  <scientific_name>Cercopithecinae</scientific_name>
+                                                                  <rank>subfamily</rank>
+                                                                </taxonomy>
+                                                                <clade>
+                                                                  <taxonomy>
+                                                                    <id provider="uniprot">9544</id>
+                                                                    <code>MACMU</code>
+                                                                    <scientific_name>Macaca mulatta</scientific_name>
+                                                                    <common_name>Rhesus macaque</common_name>
+                                                                    <rank>species</rank>
+                                                                    <uri>http://www.our-pets.net/images/rhesus1.jpg</uri>
+                                                                  </taxonomy>
+                                                                </clade>
+                                                                <clade>
+                                                                  <taxonomy>
+                                                                    <id provider="uniprot">9557</id>
+                                                                    <code>PAPHA</code>
+                                                                    <scientific_name>Papio hamadryas</scientific_name>
+                                                                    <common_name>Hamadryas baboon</common_name>
+                                                                    <rank>species</rank>
+                                                                    <uri>http://pin.primate.wisc.edu/fs/sheets/images/227lg.jpg</uri>
+                                                                  </taxonomy>
+                                                                </clade>
+                                                              </clade>
+                                                            </clade>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">9483</id>
+                                                                <code>CALJA</code>
+                                                                <scientific_name>Callithrix jacchus</scientific_name>
+                                                                <common_name>White-tufted-ear marmoset</common_name>
+                                                                <synonym>Callithrix jacchus jacchus</synonym>
+                                                                <rank>species</rank>
+                                                                <uri>http://www.arthurgrosset.com/mammals/photos/caljac28086.jpg</uri>
+                                                              </taxonomy>
+                                                            </clade>
+                                                          </clade>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">9478</id>
+                                                              <code>TARSY</code>
+                                                              <scientific_name>Tarsius syrichta</scientific_name>
+                                                              <common_name>Philippine tarsier</common_name>
+                                                              <rank>species</rank>
+                                                              <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0408/1425.jpeg</uri>
+                                                            </taxonomy>
+                                                          </clade>
+                                                        </clade>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">376911</id>
+                                                            <scientific_name>Strepsirrhini</scientific_name>
+                                                            <rank>suborder</rank>
+                                                          </taxonomy>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">30608</id>
+                                                              <code>MICMU</code>
+                                                              <scientific_name>Microcebus murinus</scientific_name>
+                                                              <common_name>Lesser mouse lemur</common_name>
+                                                              <synonym>Gray Mouse Lemur</synonym>
+                                                              <rank>species</rank>
+                                                              <uri>http://daniel.montagnon.pagesperso-orange.fr/images/MicrocbusMurinus.jpg</uri>
+                                                            </taxonomy>
+                                                          </clade>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">30611</id>
+                                                              <code>OTOGA</code>
+                                                              <scientific_name>Otolemur garnettii</scientific_name>
+                                                              <common_name>Garnett&apos;s greater bushbaby</common_name>
+                                                              <synonym>Galago garnetti</synonym>
+                                                              <synonym>Small-eared galago</synonym>
+                                                              <synonym>Garnett&apos;s greater bushbaby</synonym>
+                                                              <rank>species</rank>
+                                                              <uri>http://www.mbweni.com/images/Mbweni%20Images/naturetrail/small-earedgalago.jpg</uri>
+                                                            </taxonomy>
+                                                          </clade>
+                                                        </clade>
+                                                      </clade>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">37347</id>
+                                                          <code>TUPBE</code>
+                                                          <scientific_name>Tupaia belangeri</scientific_name>
+                                                          <common_name>Common tree shrew</common_name>
+                                                          <synonym>Tupaia glis belangeri</synonym>
+                                                          <rank>species</rank>
+                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/4/44/Tupaia_belangeri.JPG/800px-Tupaia_belangeri.JPG</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">314147</id>
+                                                        <scientific_name>Glires</scientific_name>
+                                                        <common_name>Rodents and rabbits</common_name>
+                                                      </taxonomy>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">9989</id>
+                                                          <scientific_name>Rodentia</scientific_name>
+                                                          <rank>order</rank>
+                                                        </taxonomy>
+                                                        <clade>
+                                                          <name>Hystricomorpha &amp; Sciurognathi</name>
+                                                          <reference doi="10.1186/1471-2148-9-71">
+                                                            <desc>Rodent phylogeny revised: analysis of six nuclear genes from all major rodent clades.</desc>
+                                                          </reference>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">33553</id>
+                                                              <scientific_name>Sciurognathi</scientific_name>
+                                                              <rank>suborder</rank>
+                                                            </taxonomy>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">337687</id>
+                                                                <scientific_name>Muroidea</scientific_name>
+                                                              </taxonomy>
+                                                              <clade>
+                                                                <taxonomy>
+                                                                  <id provider="uniprot">39107</id>
+                                                                  <scientific_name>Murinae</scientific_name>
+                                                                  <rank>subfamily</rank>
+                                                                </taxonomy>
+                                                                <clade>
+                                                                  <taxonomy>
+                                                                    <id provider="uniprot">10090</id>
+                                                                    <code>MOUSE</code>
+                                                                    <scientific_name>Mus musculus</scientific_name>
+                                                                    <common_name>Mouse</common_name>
+                                                                    <rank>species</rank>
+                                                                    <uri>http://www.nsrl.ttu.edu/tmot1/images/mus_musc.jpg</uri>
+                                                                  </taxonomy>
+                                                                </clade>
+                                                                <clade>
+                                                                  <taxonomy>
+                                                                    <id provider="uniprot">10116</id>
+                                                                    <code>RAT</code>
+                                                                    <scientific_name>Rattus norvegicus</scientific_name>
+                                                                    <common_name>Rat</common_name>
+                                                                    <rank>species</rank>
+                                                                    <uri>http://upload.wikimedia.org/wikipedia/commons/0/01/Rattus_norvegicus_1.jpg</uri>
+                                                                  </taxonomy>
+                                                                </clade>
+                                                              </clade>
+                                                              <clade>
+                                                                <taxonomy>
+                                                                  <id provider="uniprot">10036</id>
+                                                                  <code>MESAU</code>
+                                                                  <scientific_name>Mesocricetus auratus</scientific_name>
+                                                                  <common_name>Golden hamster</common_name>
+                                                                  <rank>species</rank>
+                                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/85/Syrian_hamster_filling_his_cheek_pouches_with_Dandelion_leaves.JPG/800px-Syrian_hamster_filling_his_cheek_pouches_with_Dandelion_leaves.JPG</uri>
+                                                                </taxonomy>
+                                                              </clade>
+                                                            </clade>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">10020</id>
+                                                                <code>DIPOR</code>
+                                                                <scientific_name>Dipodomys ordii</scientific_name>
+                                                                <common_name>Ord&apos;s kangaroo rat</common_name>
+                                                                <rank>species</rank>
+                                                                <uri>http://www.nsrl.ttu.edu/tmot1/images/dipoordi.jpg</uri>
+                                                              </taxonomy>
+                                                            </clade>
+                                                          </clade>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">33550</id>
+                                                              <scientific_name>Hystricognathi</scientific_name>
+                                                              <rank>suborder</rank>
+                                                            </taxonomy>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">10141</id>
+                                                                <code>CAVPO</code>
+                                                                <scientific_name>Cavia porcellus</scientific_name>
+                                                                <common_name>Guinea pig</common_name>
+                                                                <rank>species</rank>
+                                                                <uri>http://archive.vetknowledge.com/files/images/guinea-pig---tan.jpg</uri>
+                                                              </taxonomy>
+                                                            </clade>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">10181</id>
+                                                                <code>HETGA</code>
+                                                                <scientific_name>Heterocephalus glaber</scientific_name>
+                                                                <common_name>Naked mole rat</common_name>
+                                                                <rank>species</rank>
+                                                                <uri>http://calphotos.berkeley.edu/imgs/512x768/9092_3191/3555/0080.jpeg</uri>
+                                                              </taxonomy>
+                                                            </clade>
+                                                          </clade>
+                                                        </clade>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">43179</id>
+                                                            <code>SPETR</code>
+                                                            <scientific_name>Spermophilus tridecemlineatus</scientific_name>
+                                                            <common_name>Thirteen-lined ground squirrel</common_name>
+                                                            <synonym>Ictidomys tridecemlineatus</synonym>
+                                                            <rank>species</rank>
+                                                            <uri>http://animaldiversity.ummz.umich.edu/site/resources/phil_myers/ADW_mammals/Rodentia/Spermophilus4345.jpg/medium.jpg</uri>
+                                                          </taxonomy>
+                                                        </clade>
+                                                      </clade>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">9975</id>
+                                                          <scientific_name>Lagomorpha</scientific_name>
+                                                          <rank>order</rank>
+                                                        </taxonomy>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">9978</id>
+                                                            <code>OCHPR</code>
+                                                            <scientific_name>Ochotona princeps</scientific_name>
+                                                            <common_name>Southern American pika</common_name>
+                                                            <rank>species</rank>
+                                                            <uri>http://upload.wikimedia.org/wikipedia/commons/3/3b/Ochotona_princeps.jpg</uri>
+                                                          </taxonomy>
+                                                        </clade>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">9986</id>
+                                                            <code>RABIT</code>
+                                                            <scientific_name>Oryctolagus cuniculus</scientific_name>
+                                                            <common_name>Rabbit</common_name>
+                                                            <rank>species</rank>
+                                                            <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/3/3b/Rabbit_in_montana.jpg/675px-Rabbit_in_montana.jpg</uri>
+                                                          </taxonomy>
+                                                        </clade>
+                                                      </clade>
+                                                    </clade>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">314145</id>
+                                                      <scientific_name>Laurasiatheria</scientific_name>
+                                                      <rank>superorder</rank>
+                                                    </taxonomy>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <scientific_name>Scrotifera</scientific_name>
+                                                      </taxonomy>
+                                                      <clade>
+                                                        <name>Perissodactyla &amp; Cetartiodactyla &amp; Chiroptera</name>
+                                                        <clade>
+                                                          <name>Perissodactyla &amp; Cetartiodactyla</name>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">91561</id>
+                                                              <scientific_name>Cetartiodactyla</scientific_name>
+                                                              <common_name>Even-toed ungulates</common_name>
+                                                            </taxonomy>
+                                                            <clade>
+                                                              <name>Cetruminantia &amp; Suina</name>
+                                                              <clade>
+                                                                <taxonomy>
+                                                                  <scientific_name>Cetruminantia</scientific_name>
+                                                                </taxonomy>
+                                                                <clade>
+                                                                  <taxonomy>
+                                                                    <id provider="uniprot">9895</id>
+                                                                    <scientific_name>Bovidae</scientific_name>
+                                                                    <rank>family</rank>
+                                                                  </taxonomy>
+                                                                  <clade>
+                                                                    <taxonomy>
+                                                                      <id provider="uniprot">9913</id>
+                                                                      <code>BOVIN</code>
+                                                                      <scientific_name>Bos taurus</scientific_name>
+                                                                      <common_name>Bovine</common_name>
+                                                                      <synonym>Bos bovis</synonym>
+                                                                      <rank>species</rank>
+                                                                      <uri>http://bioweb.uwlax.edu/bio203/s2007/hayes_katy/images/DSC01638.JPG</uri>
+                                                                    </taxonomy>
+                                                                  </clade>
+                                                                  <clade>
+                                                                    <taxonomy>
+                                                                      <id provider="uniprot">9940</id>
+                                                                      <code>SHEEP</code>
+                                                                      <scientific_name>Ovis aries</scientific_name>
+                                                                      <common_name>Sheep</common_name>
+                                                                      <rank>species</rank>
+                                                                      <uri>http://animaldiversity.ummz.umich.edu/site/resources/james_dowlinghealey/blacksheep.jpg/medium.jpg</uri>
+                                                                    </taxonomy>
+                                                                  </clade>
+                                                                </clade>
+                                                                <clade>
+                                                                  <taxonomy>
+                                                                    <id provider="uniprot">9721</id>
+                                                                    <scientific_name>Cetacea</scientific_name>
+                                                                    <common_name>Whales</common_name>
+                                                                    <rank>order</rank>
+                                                                  </taxonomy>
+                                                                  <clade>
+                                                                    <taxonomy>
+                                                                      <id provider="uniprot">9771</id>
+                                                                      <code>BALMU</code>
+                                                                      <scientific_name>Balaenoptera musculus</scientific_name>
+                                                                      <common_name>Blue whale</common_name>
+                                                                      <rank>species</rank>
+                                                                      <uri>http://2.bp.blogspot.com/_W90V87w3sr8/TT63uRT_U9I/AAAAAAAAAo8/to9O8zEeo7k/s1600/bluewhale.jpg</uri>
+                                                                    </taxonomy>
+                                                                  </clade>
+                                                                  <clade>
+                                                                    <taxonomy>
+                                                                      <id provider="uniprot">9739</id>
+                                                                      <code>TURTR</code>
+                                                                      <scientific_name>Tursiops truncatus</scientific_name>
+                                                                      <common_name>Atlantic bottle-nosed dolphin</common_name>
+                                                                      <synonym>Delphinus truncatus</synonym>
+                                                                      <rank>species</rank>
+                                                                      <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/a/a6/Bottlenose_Dolphin_KSC04pd0178.jpg/800px-Bottlenose_Dolphin_KSC04pd0178.jpg</uri>
+                                                                    </taxonomy>
+                                                                  </clade>
+                                                                </clade>
+                                                              </clade>
+                                                              <clade>
+                                                                <taxonomy>
+                                                                  <id provider="uniprot">9823</id>
+                                                                  <code>PIG</code>
+                                                                  <scientific_name>Sus scrofa</scientific_name>
+                                                                  <common_name>Pig</common_name>
+                                                                  <rank>species</rank>
+                                                                  <uri>http://www.batraciens-reptiles.com/sus%20scrofa2.jpg</uri>
+                                                                </taxonomy>
+                                                              </clade>
+                                                            </clade>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">30538</id>
+                                                                <code>LAMPA</code>
+                                                                <scientific_name>Lama guanicoe pacos</scientific_name>
+                                                                <common_name>Alpaca</common_name>
+                                                                <synonym>Lama pacos</synonym>
+                                                                <rank>species</rank>
+                                                                <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/1206/0658.jpeg</uri>
+                                                              </taxonomy>
+                                                            </clade>
+                                                          </clade>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">9796</id>
+                                                              <code>HORSE</code>
+                                                              <scientific_name>Equus caballus</scientific_name>
+                                                              <common_name>Horse</common_name>
+                                                              <rank>species</rank>
+                                                              <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0801/0088.jpeg</uri>
+                                                            </taxonomy>
+                                                          </clade>
+                                                        </clade>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">9397</id>
+                                                            <scientific_name>Chiroptera</scientific_name>
+                                                            <common_name>Bats</common_name>
+                                                            <rank>order</rank>
+                                                          </taxonomy>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">59463</id>
+                                                              <code>MYOLU</code>
+                                                              <scientific_name>Myotis lucifugus</scientific_name>
+                                                              <common_name>Little brown bat</common_name>
+                                                              <rank>species</rank>
+                                                              <uri>http://biology.lakeheadu.ca/uploads/Nature_photography/brown_bat.jpg</uri>
+                                                            </taxonomy>
+                                                          </clade>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">132908</id>
+                                                              <code>PTEVA</code>
+                                                              <scientific_name>Pteropus vampyrus</scientific_name>
+                                                              <common_name>Large flying fox</common_name>
+                                                              <rank>species</rank>
+                                                              <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/5/5e/Pteropus_vampyrus1.jpg/412px-Pteropus_vampyrus1.jpg</uri>
+                                                            </taxonomy>
+                                                          </clade>
+                                                        </clade>
+                                                      </clade>
+                                                      <clade>
+                                                        <name>Carnivora</name>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">33554</id>
+                                                          <scientific_name>Carnivora</scientific_name>
+                                                          <rank>order</rank>
+                                                        </taxonomy>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">379584</id>
+                                                            <scientific_name>Caniformia</scientific_name>
+                                                            <rank>suborder</rank>
+                                                          </taxonomy>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">9646</id>
+                                                              <code>AILME</code>
+                                                              <scientific_name>Ailuropoda melanoleuca</scientific_name>
+                                                              <common_name>Giant panda</common_name>
+                                                              <rank>species</rank>
+                                                              <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/3/3c/Giant_Panda_2004-03-2.jpg/800px-Giant_Panda_2004-03-2.jpg</uri>
+                                                            </taxonomy>
+                                                          </clade>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">9615</id>
+                                                              <code>CANFA</code>
+                                                              <scientific_name>Canis familiaris</scientific_name>
+                                                              <common_name>Dog</common_name>
+                                                              <synonym>Canis lupus familiaris</synonym>
+                                                              <rank>subspecies</rank>
+                                                              <uri>http://upload.wikimedia.org/wikipedia/commons/a/ab/Wikilabrador_jardin.JPG</uri>
+                                                            </taxonomy>
+                                                          </clade>
+                                                        </clade>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">9685</id>
+                                                            <code>FELCA</code>
+                                                            <scientific_name>Felis catus</scientific_name>
+                                                            <common_name>Cat</common_name>
+                                                            <synonym>Felis silvestris catus</synonym>
+                                                            <rank>species</rank>
+                                                            <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/9/9b/Domestic_cat_cropped.jpg/755px-Domestic_cat_cropped.jpg</uri>
+                                                          </taxonomy>
+                                                        </clade>
+                                                      </clade>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">9362</id>
+                                                        <scientific_name>Insectivora</scientific_name>
+                                                        <common_name>hedgehogs, shrews, moles and others</common_name>
+                                                        <rank>order</rank>
+                                                      </taxonomy>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">9365</id>
+                                                          <code>ERIEU</code>
+                                                          <scientific_name>Erinaceus europaeus</scientific_name>
+                                                          <common_name>Western European hedgehog</common_name>
+                                                          <rank>species</rank>
+                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/d/d4/Igel01.jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">42254</id>
+                                                          <code>SORAR</code>
+                                                          <scientific_name>Sorex araneus</scientific_name>
+                                                          <common_name>Eurasian common shrew</common_name>
+                                                          <synonym>European shrew</synonym>
+                                                          <rank>species</rank>
+                                                          <uri>http://www.batraciens-reptiles.com/musaraigne2.jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                    </clade>
+                                                  </clade>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <scientific_name>Atlantogenata</scientific_name>
+                                                  </taxonomy>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">311790</id>
+                                                      <scientific_name>Afrotheria</scientific_name>
+                                                      <rank>superorder</rank>
+                                                    </taxonomy>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <scientific_name>Paenungulata</scientific_name>
+                                                      </taxonomy>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">9785</id>
+                                                          <code>LOXAF</code>
+                                                          <scientific_name>Loxodonta africana</scientific_name>
+                                                          <common_name>African savanna elephant</common_name>
+                                                          <rank>species</rank>
+                                                          <uri>http://animaldiversity.ummz.umich.edu/site/resources/susan_hoffman/elephants.jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">9813</id>
+                                                          <code>PROCA</code>
+                                                          <scientific_name>Procavia capensis</scientific_name>
+                                                          <common_name>Cape hyrax</common_name>
+                                                          <synonym>Rock dassie</synonym>
+                                                          <rank>species</rank>
+                                                          <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/1206/0460.jpeg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">9371</id>
+                                                        <code>ECHTE</code>
+                                                        <scientific_name>Echinops telfairi</scientific_name>
+                                                        <common_name>Lesser hedgehog tenrec</common_name>
+                                                        <rank>species</rank>
+                                                        <uri>http://animaldiversity.ummz.umich.edu/site/resources/david_kupitz/etelfairi.jpg</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">9348</id>
+                                                      <scientific_name>Xenarthra</scientific_name>
+                                                      <synonym>Edentata</synonym>
+                                                      <rank>superorder</rank>
+                                                    </taxonomy>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">9358</id>
+                                                        <code>CHOHO</code>
+                                                        <scientific_name>Choloepus hoffmanni</scientific_name>
+                                                        <common_name>Hoffmann&apos;s two-fingered sloth</common_name>
+                                                        <rank>species</rank>
+                                                        <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/89/Sloth8.jpg/800px-Sloth8.jpg</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">9361</id>
+                                                        <code>DASNO</code>
+                                                        <scientific_name>Dasypus novemcinctus</scientific_name>
+                                                        <common_name>Nine-banded armadillo</common_name>
+                                                        <rank>species</rank>
+                                                        <uri>http://anthropometaphors.files.wordpress.com/2008/11/nine-banded-armadillo41.jpg</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                  </clade>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">9263</id>
+                                                  <scientific_name>Metatheria</scientific_name>
+                                                  <common_name>Marsupials</common_name>
+                                                </taxonomy>
+                                                <reference doi="10.1016/j.ympev.2004.05.004">
+                                                  <desc>First combined cladistic analysis of marsupial mammal interrelationships</desc>
+                                                </reference>
+                                                <reference>
+                                                </reference>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <scientific_name>Eometatheria</scientific_name>
+                                                  </taxonomy>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">9315</id>
+                                                      <code>MACEU</code>
+                                                      <scientific_name>Macropus eugenii</scientific_name>
+                                                      <common_name>Tammar wallaby</common_name>
+                                                      <rank>species</rank>
+                                                      <uri>http://upload.wikimedia.org/wikipedia/commons/d/de/Macropus_eugenii.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">9305</id>
+                                                      <code>SARHA</code>
+                                                      <scientific_name>Sarcophilus harrisii</scientific_name>
+                                                      <common_name>Tasmanian devil</common_name>
+                                                      <synonym>Sarcophilus laniarius</synonym>
+                                                      <rank>species</rank>
+                                                      <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/3/3b/Sarcophilus_harrisii_-Healesville_Sanctuary-8a.jpg/727px-Sarcophilus_harrisii_-Healesville_Sanctuary-8a.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">13616</id>
+                                                    <code>MONDO</code>
+                                                    <scientific_name>Monodelphis domestica</scientific_name>
+                                                    <common_name>Short-tailed gray opossum</common_name>
+                                                    <rank>species</rank>
+                                                    <uri>http://animaldiversity.ummz.umich.edu/site/resources/phil_myers/classic/monodelphis.jpg/medium.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">9258</id>
+                                                <code>ORNAN</code>
+                                                <scientific_name>Ornithorhynchus anatinus</scientific_name>
+                                                <common_name>Duckbill platypus</common_name>
+                                                <rank>species</rank>
+                                                <uri>http://upload.wikimedia.org/wikipedia/commons/1/12/Platypus_BrokenRiver_QLD_Australia2.png</uri>
+                                              </taxonomy>
+                                            </clade>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">8457</id>
+                                              <scientific_name>Sauropsida</scientific_name>
+                                            </taxonomy>
+                                            <clade>
+                                              <name>Archosauria &amp; Testudines</name>
+                                              <reference doi="10.1038/ng.2615">
+                                                <desc>The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan</desc>
+                                              </reference>
+                                              <reference>
+                                              </reference>
+                                              <reference>
+                                              </reference>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">8492</id>
+                                                  <scientific_name>Archosauria</scientific_name>
+                                                </taxonomy>
+                                                <clade>
+                                                  <name>Neognathae</name>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">8825</id>
+                                                    <scientific_name>Neognathae</scientific_name>
+                                                    <rank>superorder</rank>
+                                                  </taxonomy>
+                                                  <clade>
+                                                    <name>Phasianidae &amp; Anatidae (waterfowl)</name>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">9005</id>
+                                                        <scientific_name>Phasianidae</scientific_name>
+                                                        <rank>family</rank>
+                                                      </taxonomy>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">9031</id>
+                                                          <code>CHICK</code>
+                                                          <scientific_name>Gallus gallus</scientific_name>
+                                                          <common_name>Chicken</common_name>
+                                                          <synonym>Gallus domesticus</synonym>
+                                                          <rank>species</rank>
+                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/f/f8/Rooster04_adjusted.jpg/800px-Rooster04_adjusted.jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">9103</id>
+                                                          <code>MELGA</code>
+                                                          <scientific_name>Meleagris gallopavo</scientific_name>
+                                                          <common_name>Common turkey</common_name>
+                                                          <rank>species</rank>
+                                                          <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0205/0858.jpeg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">8839</id>
+                                                        <code>ANAPL</code>
+                                                        <scientific_name>Anas platyrhynchos</scientific_name>
+                                                        <common_name>Domestic duck</common_name>
+                                                        <synonym>Anas boschas</synonym>
+                                                        <rank>species</rank>
+                                                        <uri>http://content.ornith.cornell.edu/UEWebApp/images/MPR_070302_100009_L.jpg</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">59729</id>
+                                                      <code>TAEGU</code>
+                                                      <scientific_name>Taeniopygia guttata</scientific_name>
+                                                      <common_name>Zebra finch</common_name>
+                                                      <synonym>Poephila guttata</synonym>
+                                                      <rank>species</rank>
+                                                      <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/8/84/Taeniopygia_guttata_-_front_view_-_dundee_wildlife_park.jpg/355px-Taeniopygia_guttata_-_front_view_-_dundee_wildlife_park.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">8496</id>
+                                                    <code>ALLMI</code>
+                                                    <scientific_name>Alligator mississippiensis</scientific_name>
+                                                    <common_name>American alligator</common_name>
+                                                    <rank>species</rank>
+                                                    <uri>http://www.herpcenter.com/reptile-caresheets/images/american_alligator.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">13735</id>
+                                                  <code>PELSI</code>
+                                                  <scientific_name>Pelodiscus sinensis</scientific_name>
+                                                  <authority>(Wiegmann, 1835) Cox et al. 1998</authority>
+                                                  <common_name>Chinese softshell turtle</common_name>
+                                                  <synonym>Trionyx sinensis</synonym>
+                                                  <rank>species</rank>
+                                                  <uri>http://www.chelonia.org/PsinensisTR1.jpg</uri>
+                                                </taxonomy>
+                                              </clade>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">28377</id>
+                                                <code>ANOCA</code>
+                                                <scientific_name>Anolis carolinensis</scientific_name>
+                                                <authority>Voigt, 1832</authority>
+                                                <common_name>Green anole</common_name>
+                                                <synonym>American chameleon</synonym>
+                                                <rank>species</rank>
+                                                <uri>http://content61.eol.org/content/2009/09/20/01/05528_580_360.jpg</uri>
+                                                <uri>http://content61.eol.org/content/2008/10/08/13/66818_580_360.jpg</uri>
+                                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/5/5a/Anolis_carolinensis.jpg/800px-Anolis_carolinensis.jpg</uri>
+                                              </taxonomy>
+                                            </clade>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">8353</id>
+                                            <scientific_name>Xenopus</scientific_name>
+                                            <rank>genus</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">8355</id>
+                                              <code>XENLA</code>
+                                              <scientific_name>Xenopus laevis</scientific_name>
+                                              <authority>Daudin, 1802</authority>
+                                              <common_name>African clawed frog</common_name>
+                                              <synonym>Bufo laevis</synonym>
+                                              <rank>species</rank>
+                                              <uri>http://upload.wikimedia.org/wikipedia/commons/e/e3/Xenopus_laevis.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">8364</id>
+                                              <code>XENTR</code>
+                                              <scientific_name>Xenopus tropicalis</scientific_name>
+                                              <common_name>Western clawed frog</common_name>
+                                              <synonym>Silurana tropicalis</synonym>
+                                              <rank>species</rank>
+                                              <uri>http://genoweb.univ-rennes1.fr/OGP/xenopus%20tropicalis.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">7897</id>
+                                          <code>LATCH</code>
+                                          <scientific_name>Latimeria chalumnae</scientific_name>
+                                          <common_name>West Indian ocean coelacanth</common_name>
+                                          <rank>species</rank>
+                                          <uri>http://marinebio.org/upload/Latimeria-chalumnae/1.jpg</uri>
+                                          <uri>http://images.nationalgeographic.com/wpf/media-live/photos/000/005/cache/coelacanth_501_600x450.jpg</uri>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <name>Teleostei</name>
+                                      <taxonomy>
+                                        <id provider="uniprot">32443</id>
+                                        <scientific_name>Teleostei</scientific_name>
+                                      </taxonomy>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">123368</id>
+                                          <scientific_name>Acanthomorpha</scientific_name>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">32485</id>
+                                            <scientific_name>Percomorpha</scientific_name>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">129949</id>
+                                              <scientific_name>Smegmamorpha</scientific_name>
+                                            </taxonomy>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">32456</id>
+                                                <scientific_name>Atherinomorpha</scientific_name>
+                                              </taxonomy>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">8090</id>
+                                                  <code>ORYLA</code>
+                                                  <scientific_name>Oryzias latipes</scientific_name>
+                                                  <common_name>Medaka fish</common_name>
+                                                  <synonym>Japanese ricefish</synonym>
+                                                  <rank>species</rank>
+                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/4/49/Nihonmedaka.jpg</uri>
+                                                </taxonomy>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">8083</id>
+                                                  <code>XIPMA</code>
+                                                  <scientific_name>Xiphophorus maculatus</scientific_name>
+                                                  <authority>Guenther, 1866</authority>
+                                                  <common_name>Southern platyfish</common_name>
+                                                  <synonym>Platypoecilus maculatus</synonym>
+                                                  <rank>species</rank>
+                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/6/6b/Poissons_06.jpg</uri>
+                                                </taxonomy>
+                                              </clade>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">69293</id>
+                                                <code>GASAC</code>
+                                                <scientific_name>Gasterosteus aculeatus</scientific_name>
+                                                <common_name>Three-spined stickleback</common_name>
+                                                <rank>species</rank>
+                                                <uri>http://www.jjphoto.dk/fish_archive/freshwater/gasterosteus_aculeatus.jpg</uri>
+                                              </taxonomy>
+                                            </clade>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">31031</id>
+                                              <scientific_name>Tetraodontidae</scientific_name>
+                                              <common_name>puffers</common_name>
+                                              <rank>family</rank>
+                                            </taxonomy>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">31033</id>
+                                                <code>TAKRU</code>
+                                                <scientific_name>Takifugu rubripes</scientific_name>
+                                                <common_name>Japanese pufferfish</common_name>
+                                                <synonym>Fugu rubripes</synonym>
+                                                <rank>species</rank>
+                                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/2/25/Fugu_in_Tank.jpg/800px-Fugu_in_Tank.jpg</uri>
+                                              </taxonomy>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">99883</id>
+                                                <code>TETNG</code>
+                                                <scientific_name>Tetraodon nigroviridis</scientific_name>
+                                                <common_name>Green puffer</common_name>
+                                                <synonym>Chelonodon nigroviridis</synonym>
+                                                <rank>species</rank>
+                                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/b/b6/Tetraodon_nigroviridis_1.jpg/800px-Tetraodon_nigroviridis_1.jpg</uri>
+                                              </taxonomy>
+                                            </clade>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">8128</id>
+                                              <code>ORENI</code>
+                                              <scientific_name>Tilapia nilotica</scientific_name>
+                                              <authority>Linnaeus, 1758</authority>
+                                              <common_name>Nile tilapia</common_name>
+                                              <synonym>Tilapia nilotica</synonym>
+                                              <rank>species</rank>
+                                              <uri>http://www.jjphoto.dk/fish_archive/warm_freshwater/oreochromis_niloticus_niloticus.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">8049</id>
+                                            <code>GADMO</code>
+                                            <scientific_name>Gadus morhua</scientific_name>
+                                            <common_name>Atlantic cod</common_name>
+                                            <rank>species</rank>
+                                            <uri>http://www.marinbi.com/g-morhua.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">7955</id>
+                                          <code>DANRE</code>
+                                          <scientific_name>Danio rerio</scientific_name>
+                                          <common_name>Zebrafish</common_name>
+                                          <synonym>Brachydanio rerio</synonym>
+                                          <rank>species</rank>
+                                          <uri>http://fishbase.org.cn/images/species/Darer_m0.jpg</uri>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">7868</id>
+                                      <code>CALMI</code>
+                                      <scientific_name>Callorhynchus milii</scientific_name>
+                                      <common_name>Australian ghost shark</common_name>
+                                      <synonym>Australian ghost shark</synonym>
+                                      <rank>species</rank>
+                                      <uri>http://www.tudiscovery.com/tiburones/que_es/popup_que/asset/07914907646434433_elephant_shark_380x290.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">7757</id>
+                                    <code>PETMA</code>
+                                    <scientific_name>Petromyzon marinus</scientific_name>
+                                    <common_name>Sea lamprey</common_name>
+                                    <rank>species</rank>
+                                    <uri>http://www.uk-fish.info/pics/sealampray01.jpg</uri>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <name>Urochordata</name>
+                                <taxonomy>
+                                  <id provider="uniprot">7712</id>
+                                  <scientific_name>Urochordata</scientific_name>
+                                  <rank>subphylum</rank>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">7718</id>
+                                    <scientific_name>Ciona</scientific_name>
+                                    <rank>genus</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">7719</id>
+                                      <code>CIOIN</code>
+                                      <scientific_name>Ciona intestinalis</scientific_name>
+                                      <common_name>Transparent sea squirt</common_name>
+                                      <synonym>Ascidia intestinalis</synonym>
+                                      <rank>species</rank>
+                                      <uri>http://adl.brs.gov.au/marinepests/images/Ciona_intestinalis2.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">51511</id>
+                                      <code>CIOSA</code>
+                                      <scientific_name>Ciona savignyi</scientific_name>
+                                      <common_name>Pacific transparent sea squirt</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://www.pnwscuba.com/invasives/photos/ciona4.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="ncbi">34765</id>
+                                    <code>OIKDI</code>
+                                    <scientific_name>Oikopleura dioica</scientific_name>
+                                    <common_name>Tunicate</common_name>
+                                    <rank>species</rank>
+                                    <uri>http://jellieszone.com/images/oikopleura.jpg</uri>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">7739</id>
+                                <code>BRAFL</code>
+                                <scientific_name>Branchiostoma floridae</scientific_name>
+                                <common_name>Florida lancelet</common_name>
+                                <synonym>Amphioxus</synonym>
+                                <rank>species</rank>
+                                <uri>http://www.nicerweb.com/sketches/video/PBS-ShapeOfLife/4.8_BonesBrawnBrains/Branchiostoma_floridae.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <name>Hemichordata &amp; Echinodermata</name>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">10224</id>
+                                <code>SACKO</code>
+                                <scientific_name>Saccoglossus kowalevskii</scientific_name>
+                                <authority>Agassiz, 1873</authority>
+                                <common_name>Acorn worm</common_name>
+                                <rank>species</rank>
+                                <uri>http://faculty.washington.edu/bjswalla/Hemichordata/Enteropneusta/SkowAK.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">7668</id>
+                                <code>STRPU</code>
+                                <scientific_name>Strongylocentrotus purpuratus</scientific_name>
+                                <common_name>Purple sea urchin</common_name>
+                                <rank>species</rank>
+                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/f/f4/Strongylocentrotus_purpuratus_1.jpg/724px-Strongylocentrotus_purpuratus_1.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">33317</id>
+                            <scientific_name>Protostomia</scientific_name>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">1206794</id>
+                              <scientific_name>Ecdysozoa</scientific_name>
+                            </taxonomy>
+                            <reference doi="10.1098/rstb.2007.2243">
+                              <desc>The evolution of the Ecdysozoa</desc>
+                            </reference>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">88770</id>
+                                <scientific_name>Panarthropoda</scientific_name>
+                              </taxonomy>
+                              <clade>
+                                <name>Onychophora &amp; Arthropoda</name>
+                                <reference doi="10.1073/pnas.1105499108">
+                                  <desc>MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda</desc>
+                                </reference>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">6656</id>
+                                    <scientific_name>Arthropoda</scientific_name>
+                                    <rank>phylum</rank>
+                                  </taxonomy>
+                                  <reference doi="10.1098/rspb.2010.0590">
+                                    <desc>A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata</desc>
+                                  </reference>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">197563</id>
+                                      <scientific_name>Mandibulata</scientific_name>
+                                    </taxonomy>
+                                    <reference doi="doi:10.1038/ncomms3485">
+                                      <desc>Arthropod fossil data increase congruence of morphological and molecular phylogenies</desc>
+                                    </reference>
+                                    <reference>
+                                    </reference>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">197562</id>
+                                        <scientific_name>Pancrustacea</scientific_name>
+                                      </taxonomy>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">6960</id>
+                                          <scientific_name>Hexapoda</scientific_name>
+                                          <rank>superclass</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">50557</id>
+                                            <scientific_name>Insecta</scientific_name>
+                                            <common_name>true insects</common_name>
+                                            <rank>class</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">33340</id>
+                                              <scientific_name>Neoptera</scientific_name>
+                                              <rank>subclass</rank>
+                                            </taxonomy>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">33392</id>
+                                                <scientific_name>Endopterygota</scientific_name>
+                                                <rank>infraclass</rank>
+                                              </taxonomy>
+                                              <clade>
+                                                <name>Hymenoptera &amp; Lepidoptera &amp; Diptera</name>
+                                                <clade>
+                                                  <name>Lepidoptera &amp; Diptera</name>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">7147</id>
+                                                      <scientific_name>Diptera</scientific_name>
+                                                      <rank>order</rank>
+                                                    </taxonomy>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">7215</id>
+                                                        <scientific_name>Drosophila</scientific_name>
+                                                        <common_name>fruit flies</common_name>
+                                                        <rank>genus</rank>
+                                                      </taxonomy>
+                                                      <reference doi="10.1534/genetics.111.126540">
+                                                        <desc>The 19 Genomes of Drosophila: A BAC Library Resource for Genus-Wide and Genome-Scale Comparative Evolutionary Research</desc>
+                                                      </reference>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">32341</id>
+                                                          <scientific_name>Sophophora</scientific_name>
+                                                          <rank>subgenus</rank>
+                                                        </taxonomy>
+                                                        <clade>
+                                                          <name>melanogaster &amp; pseudoobscura subgroups</name>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">32346</id>
+                                                              <scientific_name>melanogaster group</scientific_name>
+                                                            </taxonomy>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">32351</id>
+                                                                <scientific_name>melanogaster subgroup</scientific_name>
+                                                              </taxonomy>
+                                                              <clade>
+                                                                <name>DROSE &amp; DROSI &amp; DROME &amp; DROYA</name>
+                                                                <clade>
+                                                                  <name>DROSE &amp; DROSI &amp; DROME</name>
+                                                                  <clade>
+                                                                    <name>DROSE &amp; DROSI</name>
+                                                                    <clade>
+                                                                      <taxonomy>
+                                                                        <id provider="uniprot">7238</id>
+                                                                        <code>DROSE</code>
+                                                                        <scientific_name>Drosophila sechellia</scientific_name>
+                                                                        <common_name>Fruit fly</common_name>
+                                                                        <rank>species</rank>
+                                                                      </taxonomy>
+                                                                    </clade>
+                                                                    <clade>
+                                                                      <taxonomy>
+                                                                        <id provider="uniprot">7240</id>
+                                                                        <code>DROSI</code>
+                                                                        <scientific_name>Drosophila simulans</scientific_name>
+                                                                        <common_name>Fruit fly</common_name>
+                                                                        <rank>species</rank>
+                                                                      </taxonomy>
+                                                                    </clade>
+                                                                  </clade>
+                                                                  <clade>
+                                                                    <taxonomy>
+                                                                      <id provider="uniprot">7227</id>
+                                                                      <code>DROME</code>
+                                                                      <scientific_name>Drosophila melanogaster</scientific_name>
+                                                                      <common_name>Fruit fly</common_name>
+                                                                      <rank>species</rank>
+                                                                      <uri>http://www.snv.jussieu.fr/bmedia/ATP/images/dro-mal1.jpg</uri>
+                                                                    </taxonomy>
+                                                                  </clade>
+                                                                </clade>
+                                                                <clade>
+                                                                  <taxonomy>
+                                                                    <id provider="uniprot">7245</id>
+                                                                    <code>DROYA</code>
+                                                                    <scientific_name>Drosophila yakuba</scientific_name>
+                                                                    <common_name>Fruit fly</common_name>
+                                                                    <rank>species</rank>
+                                                                  </taxonomy>
+                                                                </clade>
+                                                              </clade>
+                                                              <clade>
+                                                                <taxonomy>
+                                                                  <id provider="uniprot">7220</id>
+                                                                  <code>DROER</code>
+                                                                  <scientific_name>Drosophila erecta</scientific_name>
+                                                                  <common_name>Fruit fly</common_name>
+                                                                  <rank>species</rank>
+                                                                </taxonomy>
+                                                              </clade>
+                                                            </clade>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">7217</id>
+                                                                <code>DROAN</code>
+                                                                <scientific_name>Drosophila ananassae</scientific_name>
+                                                                <common_name>Fruit fly</common_name>
+                                                                <rank>species</rank>
+                                                              </taxonomy>
+                                                            </clade>
+                                                          </clade>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">32358</id>
+                                                              <scientific_name>pseudoobscura subgroup</scientific_name>
+                                                            </taxonomy>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">7234</id>
+                                                                <code>DROPE</code>
+                                                                <scientific_name>Drosophila persimilis</scientific_name>
+                                                                <common_name>Fruit fly</common_name>
+                                                                <rank>species</rank>
+                                                              </taxonomy>
+                                                            </clade>
+                                                            <clade>
+                                                              <taxonomy>
+                                                                <id provider="uniprot">46245</id>
+                                                                <code>DROPS</code>
+                                                                <scientific_name>Drosophila pseudoobscura pseudoobscura</scientific_name>
+                                                                <common_name>Fruit fly</common_name>
+                                                                <rank>subspecies</rank>
+                                                                <uri>http://www.naylorgallery.com/wp-content/uploads/fly4stack01small.jpg</uri>
+                                                              </taxonomy>
+                                                            </clade>
+                                                          </clade>
+                                                        </clade>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">7260</id>
+                                                            <code>DROWI</code>
+                                                            <scientific_name>Drosophila willistoni</scientific_name>
+                                                            <common_name>Fruit fly</common_name>
+                                                            <rank>species</rank>
+                                                          </taxonomy>
+                                                        </clade>
+                                                      </clade>
+                                                      <clade>
+                                                        <name>Drosophila subgenus &amp; Hawaiian Drosophila</name>
+                                                        <clade>
+                                                          <name>Drosophila subgenus</name>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">7230</id>
+                                                              <code>DROMO</code>
+                                                              <scientific_name>Drosophila mojavensis</scientific_name>
+                                                              <common_name>Fruit fly</common_name>
+                                                              <rank>species</rank>
+                                                            </taxonomy>
+                                                          </clade>
+                                                          <clade>
+                                                            <taxonomy>
+                                                              <id provider="uniprot">7244</id>
+                                                              <code>DROVI</code>
+                                                              <scientific_name>Drosophila virilis</scientific_name>
+                                                              <common_name>Fruit fly</common_name>
+                                                              <rank>species</rank>
+                                                            </taxonomy>
+                                                          </clade>
+                                                        </clade>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">7222</id>
+                                                            <code>DROGR</code>
+                                                            <scientific_name>Drosophila grimshawi</scientific_name>
+                                                            <common_name>Fruit fly</common_name>
+                                                            <synonym>Idiomyia grimshawi</synonym>
+                                                            <rank>species</rank>
+                                                            <uri>http://www.pacificislandbooks.com/fruitf~1.jpg</uri>
+                                                          </taxonomy>
+                                                        </clade>
+                                                      </clade>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">7157</id>
+                                                        <scientific_name>Culicidae</scientific_name>
+                                                        <common_name>mosquitos</common_name>
+                                                        <rank>family</rank>
+                                                      </taxonomy>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">7159</id>
+                                                          <code>AEDAE</code>
+                                                          <scientific_name>Aedes aegypti</scientific_name>
+                                                          <common_name>Yellowfever mosquito</common_name>
+                                                          <synonym>Culex aegypti</synonym>
+                                                          <rank>species</rank>
+                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/4/48/Aedes_aegypti_biting_human.jpg/757px-Aedes_aegypti_biting_human.jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">7165</id>
+                                                          <code>ANOGA</code>
+                                                          <scientific_name>Anopheles gambiae</scientific_name>
+                                                          <common_name>African malaria mosquito</common_name>
+                                                          <rank>species</rank>
+                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/e/e9/Anopheles_gambiae_Mosquito.jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">7175</id>
+                                                          <code>CULPI</code>
+                                                          <scientific_name>Culex pipiens</scientific_name>
+                                                          <common_name>House mosquito</common_name>
+                                                          <rank>species</rank>
+                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/3/35/Culex_pipiens_2007-1.jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                    </clade>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">104431</id>
+                                                      <scientific_name>Obtectomera</scientific_name>
+                                                    </taxonomy>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">7091</id>
+                                                        <code>BOMMO</code>
+                                                        <scientific_name>Bombyx mori</scientific_name>
+                                                        <common_name>Silk moth</common_name>
+                                                        <rank>species</rank>
+                                                        <uri>http://lepidoptera.butterflyhouse.com.au/bomb/mori5.jpg</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">13037</id>
+                                                        <code>DANPL</code>
+                                                        <scientific_name>Danaus plexippus</scientific_name>
+                                                        <common_name>Monarch butterfly</common_name>
+                                                        <rank>species</rank>
+                                                        <uri>http://bugguide.net/images/cache/7QFRQQYRJKQ0X0YQM0Z02000U0ORKQR090H07QBRFKNRQQH0P0YRE0YRZQARLQWR70JQG09RYKDQJKCQFKFQJKTQI0.jpg</uri>
+                                                        <uri>http://bugguide.net/images/raw/7RTZXR3Z6RRHKZHH8RVL8RRHMZKHERKHQZLHGRLHPR1LERQH4RCZYL1LGRHH7ZZHER1LGRSH7R6L.jpg</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                  </clade>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">7400</id>
+                                                    <scientific_name>Apocrita</scientific_name>
+                                                    <common_name>wasps, ants and bees</common_name>
+                                                  </taxonomy>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">7434</id>
+                                                      <scientific_name>Aculeata</scientific_name>
+                                                      <rank>suborder</rank>
+                                                    </taxonomy>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">36668</id>
+                                                        <scientific_name>Formicidae</scientific_name>
+                                                        <common_name>ants</common_name>
+                                                        <rank>family</rank>
+                                                      </taxonomy>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">143999</id>
+                                                          <scientific_name>Attini</scientific_name>
+                                                          <rank>tribe</rank>
+                                                        </taxonomy>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">12957</id>
+                                                            <code>ATTCE</code>
+                                                            <scientific_name>Atta cephalotes</scientific_name>
+                                                            <authority>Linnaeus, 1758</authority>
+                                                            <common_name>Leafcutter ant</common_name>
+                                                            <rank>species</rank>
+                                                            <uri>http://upload.wikimedia.org/wikipedia/commons/4/4e/Leaf-cutting_ant.jpg</uri>
+                                                          </taxonomy>
+                                                        </clade>
+                                                        <clade>
+                                                          <taxonomy>
+                                                            <id provider="uniprot">103372</id>
+                                                            <code>ACREC</code>
+                                                            <scientific_name>Acromyrmex echinatior</scientific_name>
+                                                            <authority>Forel, 1899</authority>
+                                                            <common_name>Panamanian leafcutter ant</common_name>
+                                                            <synonym>Acromyrmex octospinosus echinatior</synonym>
+                                                            <rank>species</rank>
+                                                            <uri>http://hymenopteragenome.org/acromyrmex/sites/hymenopteragenome.org.acromyrmex/files/Acromyrmex_echinatior2.jpg</uri>
+                                                          </taxonomy>
+                                                        </clade>
+                                                      </clade>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">104421</id>
+                                                          <code>CAMFO</code>
+                                                          <scientific_name>Camponotus floridanus</scientific_name>
+                                                          <authority>Buckley, 1866</authority>
+                                                          <common_name>Florida carpenter ant</common_name>
+                                                          <rank>species</rank>
+                                                          <uri>http://bugguide.net/images/cache/5RLH6RRHXRALZZ9LZZ6L3LBLXZBL2RFZHZ9L7ZKH4RDZ3L3Z2RZHKZCLMZKH4R0H6R3Z6RSHMZBL5RRH5ROLKZELLZ.jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">7460</id>
+                                                        <code>APIME</code>
+                                                        <scientific_name>Apis mellifera</scientific_name>
+                                                        <common_name>Honeybee</common_name>
+                                                        <rank>species</rank>
+                                                        <uri>http://www.floridanature.org/photos/Apis_mellifera_6b_&amp;_Trifolium_sp.,_TBP,_Tallahassee,_20030323.jpg</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">7425</id>
+                                                      <code>NASVI</code>
+                                                      <scientific_name>Nasonia vitripennis</scientific_name>
+                                                      <common_name>Parasitic wasp</common_name>
+                                                      <rank>species</rank>
+                                                      <uri>http://www.freshpond.org/nasonia.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">7070</id>
+                                                  <code>TRICA</code>
+                                                  <scientific_name>Tribolium castaneum</scientific_name>
+                                                  <common_name>Red flour beetle</common_name>
+                                                  <rank>species</rank>
+                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/d/da/Tribolium_castaneum.jpg</uri>
+                                                </taxonomy>
+                                              </clade>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">33342</id>
+                                                <scientific_name>Paraneoptera</scientific_name>
+                                                <rank>infraclass</rank>
+                                              </taxonomy>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">7524</id>
+                                                  <scientific_name>Hemiptera</scientific_name>
+                                                  <rank>order</rank>
+                                                </taxonomy>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">7029</id>
+                                                    <code>ACYPI</code>
+                                                    <scientific_name>Acyrthosiphon pisum</scientific_name>
+                                                    <common_name>Pea aphid</common_name>
+                                                    <rank>species</rank>
+                                                    <uri>http://www.agroatlas.ru/content/pests/Acyrthosiphon_pisum/Acyrthosiphon_pisum.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">13249</id>
+                                                    <code>RHOPR</code>
+                                                    <scientific_name>Rhodnius prolixus</scientific_name>
+                                                    <common_name>Triatomid bug</common_name>
+                                                    <rank>species</rank>
+                                                    <uri>http://upload.wikimedia.org/wikipedia/commons/b/b9/Rhodnius_prolixus.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">121224</id>
+                                                  <code>PEDHC</code>
+                                                  <scientific_name>Pediculus humanus subsp. corporis</scientific_name>
+                                                  <common_name>Body louse</common_name>
+                                                  <rank>subspecies</rank>
+                                                  <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/9/92/Body_lice.jpg/436px-Body_lice.jpg</uri>
+                                                </taxonomy>
+                                              </clade>
+                                            </clade>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">568273</id>
+                                              <scientific_name>Machilis germanica</scientific_name>
+                                              <rank>species</rank>
+                                              <uri>http://www.naturefg.com/images/c-animals/machilis.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">383857</id>
+                                            <scientific_name>Campodea fragilis</scientific_name>
+                                            <rank>species</rank>
+                                            <uri>http://images.wikia.com/insect/images/3/3c/Campodea_fragilis.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">6657</id>
+                                          <scientific_name>Crustacea</scientific_name>
+                                          <rank>subphylum</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">6658</id>
+                                            <scientific_name>Branchiopoda</scientific_name>
+                                            <rank>class</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">6661</id>
+                                              <code>ARTSF</code>
+                                              <scientific_name>Artemia franciscana</scientific_name>
+                                              <common_name>Brine shrimp</common_name>
+                                              <synonym>Artemia sanfranciscana</synonym>
+                                              <rank>species</rank>
+                                              <uri>http://www.aslo.org/photopost/data/518/medium/8Brine_shrimp.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">6669</id>
+                                              <code>DAPPU</code>
+                                              <scientific_name>Daphnia pulex</scientific_name>
+                                              <common_name>Water flea</common_name>
+                                              <rank>species</rank>
+                                              <uri>http://www.microscopy-uk.org.uk/mag/imgjun99/daphni.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">6706</id>
+                                            <code>HOMAM</code>
+                                            <scientific_name>Homarus americanus</scientific_name>
+                                            <common_name>American lobster</common_name>
+                                            <uri>http://upload.wikimedia.org/wikipedia/commons/5/5e/Lobster.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">61985</id>
+                                        <scientific_name>Myriapoda</scientific_name>
+                                        <rank>subphylum</rank>
+                                      </taxonomy>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">7553</id>
+                                          <scientific_name>Diplopoda</scientific_name>
+                                          <common_name>millipedes</common_name>
+                                          <rank>class</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">118561</id>
+                                            <scientific_name>Helminthomorpha</scientific_name>
+                                            <rank>subclass</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">364406</id>
+                                              <code>ANTGC</code>
+                                              <scientific_name>Antrokoreana gracilipes</scientific_name>
+                                              <common_name>Troglobite millipede</common_name>
+                                              <rank>species</rank>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">174156</id>
+                                              <code>NARAN</code>
+                                              <scientific_name>Narceus annularis</scientific_name>
+                                              <common_name>Millipede</common_name>
+                                              <rank>species</rank>
+                                              <uri>http://i.pbase.com/g4/59/68959/2/59864073.narceus0705062large.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">52428</id>
+                                            <scientific_name>Polyxenus lagurus</scientific_name>
+                                            <common_name>bristly millipede</common_name>
+                                            <rank>species</rank>
+                                            <uri>http://upload.wikimedia.org/wikipedia/commons/5/54/Polyxenus.lagurus.1.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">7540</id>
+                                          <scientific_name>Chilopoda</scientific_name>
+                                          <common_name>centipedes</common_name>
+                                          <rank>class</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">29022</id>
+                                            <code>SCUCO</code>
+                                            <scientific_name>Scutigera coleoptrata</scientific_name>
+                                            <common_name>House centipede</common_name>
+                                            <rank>species</rank>
+                                            <uri>http://upload.wikimedia.org/wikipedia/commons/1/14/Scutigera_coleoptrata.JPG</uri>
+                                          </taxonomy>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">126957</id>
+                                            <code>STRMM</code>
+                                            <scientific_name>Strigamia maritima</scientific_name>
+                                            <common_name>European centipede</common_name>
+                                            <synonym>Geophilus maritimus</synonym>
+                                            <rank>species</rank>
+                                            <uri>http://images.marinespecies.org/resized/22703_strigamia-maritima-male-loch-linnhe-scotland.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">6843</id>
+                                      <scientific_name>Chelicerata</scientific_name>
+                                      <rank>subphylum</rank>
+                                    </taxonomy>
+                                    <reference doi="10.1016/j.ympev.2009.08.014">
+                                      <desc>A 454 sequencing approach for large scale phylogenomic analysis of the common emperor scorpion (Pandinus imperator)</desc>
+                                    </reference>
+                                    <reference>
+                                    </reference>
+                                    <reference>
+                                    </reference>
+                                    <reference>
+                                    </reference>
+                                    <clade>
+                                      <name>Arachnida &amp; Merostomata</name>
+                                      <taxonomy>
+                                        <id>Sea spider</id>
+                                      </taxonomy>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">6854</id>
+                                          <scientific_name>Arachnida</scientific_name>
+                                          <rank>class</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">6933</id>
+                                            <scientific_name>Acari</scientific_name>
+                                            <common_name>mites &amp; ticks</common_name>
+                                            <rank>subclass</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">6945</id>
+                                              <code>IXOSC</code>
+                                              <scientific_name>Ixodes scapularis</scientific_name>
+                                              <common_name>Black-legged tick</common_name>
+                                              <synonym>Deer tick</synonym>
+                                              <rank>species</rank>
+                                              <uri>http://upload.wikimedia.org/wikipedia/commons/8/8c/Deertick.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">32264</id>
+                                              <code>TETUR</code>
+                                              <scientific_name>Tetranychus urticae</scientific_name>
+                                              <common_name>Two-spotted spider mite</common_name>
+                                              <rank>species</rank>
+                                              <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/c/c5/Tetranychus-urticae.jpg/472px-Tetranychus-urticae.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">34649</id>
+                                            <code>MESMA</code>
+                                            <scientific_name>Mesobuthus martensii</scientific_name>
+                                            <authority>Karsch, 1879</authority>
+                                            <common_name>Manchurian scorpion</common_name>
+                                            <synonym>Buthus martensi</synonym>
+                                            <synonym>Buthus martensii</synonym>
+                                            <rank>species</rank>
+                                            <uri>http://www.ntnu.no/ub/scorpion-files/m_martensii1.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">6850</id>
+                                          <code>LIMPO</code>
+                                          <scientific_name>Limulus polyphemus</scientific_name>
+                                          <common_name>Atlantic horseshoe crab</common_name>
+                                          <rank>species</rank>
+                                          <uri>http://www.biopix.eu/photosmedium/Limulus%20polyphemus%2000008.JPG</uri>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">258330</id>
+                                        <scientific_name>Ammothea hilgendorfi</scientific_name>
+                                        <rank>species</rank>
+                                        <uri>http://nathistoc.bio.uci.edu/Pycnogonida/DSCF0073b.jpg</uri>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">488523</id>
+                                    <scientific_name>Euperipatoides kanangrensis</scientific_name>
+                                    <authority>Reid, 1996</authority>
+                                    <rank>species</rank>
+                                    <uri>http://content60.eol.org/content/2012/04/05/01/26600_580_360.jpg</uri>
+                                    <uri>http://upload.wikimedia.org/wikipedia/commons/6/67/Euperipatoides_kanangrensis_crop.jpg</uri>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">232323</id>
+                                  <code>HYPDU</code>
+                                  <scientific_name>Hypsibius dujardini</scientific_name>
+                                  <common_name>Water bear</common_name>
+                                  <synonym>Macrobiotus dujardini</synonym>
+                                  <rank>species</rank>
+                                  <uri>http://content62.eol.org/content/2013/08/23/23/61018_580_360.jpg</uri>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">6231</id>
+                                <scientific_name>Nematoda</scientific_name>
+                                <common_name>roundworms</common_name>
+                                <rank>phylum</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">119089</id>
+                                  <scientific_name>Chromadorea</scientific_name>
+                                  <rank>class</rank>
+                                </taxonomy>
+                                <reference doi="10.1038/32160">
+                                </reference>
+                                <clade>
+                                  <name>nematode Clade V</name>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">6237</id>
+                                      <scientific_name>Caenorhabditis</scientific_name>
+                                      <rank>genus</rank>
+                                    </taxonomy>
+                                    <reference doi="10.1073/pnas.0403094101">
+                                      <desc>Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss</desc>
+                                    </reference>
+                                    <clade>
+                                      <name>CAEBR &amp; CAERE &amp; CAEBE &amp; CAEEL</name>
+                                      <clade>
+                                        <name>CAEBR &amp; CAERE &amp; CAEBE</name>
+                                        <clade>
+                                          <name>CAEBR &amp; CAERE</name>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">6238</id>
+                                              <code>CAEBR</code>
+                                              <scientific_name>Caenorhabditis briggsae</scientific_name>
+                                              <rank>species</rank>
+                                              <uri>http://www.life.umd.edu/biology/haag/briggsae_herm.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">31234</id>
+                                              <code>CAERE</code>
+                                              <scientific_name>Caenorhabditis remanei</scientific_name>
+                                              <synonym>Caenorhabditis vulgaris</synonym>
+                                              <rank>species</rank>
+                                              <uri>http://lemur.amu.edu.pl/share/php/mirnest_1.0/species_images/Caenorhabditis_remanei.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">135651</id>
+                                            <code>CAEBE</code>
+                                            <scientific_name>Caenorhabditis brenneri</scientific_name>
+                                            <common_name>Nematode worm</common_name>
+                                            <synonym>Caenorhabditis CB5161</synonym>
+                                            <rank>species</rank>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">6239</id>
+                                          <code>CAEEL</code>
+                                          <scientific_name>Caenorhabditis elegans</scientific_name>
+                                          <rank>species</rank>
+                                          <uri>http://homepages.ed.ac.uk/mbx/C_elegans/N2_picture.gif</uri>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">281687</id>
+                                        <code>CAEJA</code>
+                                        <scientific_name>Caenorhabditis japonica</scientific_name>
+                                        <rank>species</rank>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">54126</id>
+                                      <code>PRIPA</code>
+                                      <scientific_name>Pristionchus pacificus</scientific_name>
+                                      <common_name>Parasitic nematode</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://smithlabdb.usc.edu/images/Pristionchus_pacificus.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">6296</id>
+                                    <scientific_name>Onchocercidae</scientific_name>
+                                    <rank>family</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">6279</id>
+                                      <code>BRUMA</code>
+                                      <scientific_name>Brugia malayi</scientific_name>
+                                      <common_name>Filarial nematode worm</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://upload.wikimedia.org/wikipedia/commons/4/4a/Brugia_malayi.JPG</uri>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">6293</id>
+                                      <code>WUCBA</code>
+                                      <scientific_name>Wuchereria bancrofti</scientific_name>
+                                      <rank>species</rank>
+                                      <uri>http://upload.wikimedia.org/wikipedia/commons/a/a9/Wuchereria_bancrofti_1_DPDX.JPG</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">6334</id>
+                                  <code>TRISP</code>
+                                  <scientific_name>Trichinella spiralis</scientific_name>
+                                  <common_name>Trichina worm</common_name>
+                                  <rank>species</rank>
+                                  <uri>http://upload.wikimedia.org/wikipedia/commons/e/e8/Trichinella_larv1_DPDx.JPG</uri>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">1206795</id>
+                              <scientific_name>Lophotrochozoa</scientific_name>
+                            </taxonomy>
+                            <clade>
+                              <name>Annelida &amp; Mollusca</name>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">6447</id>
+                                  <scientific_name>Mollusca</scientific_name>
+                                  <rank>phylum</rank>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">6448</id>
+                                    <scientific_name>Gastropoda</scientific_name>
+                                    <rank>class</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">6500</id>
+                                      <code>APLCA</code>
+                                      <scientific_name>Aplysia californica</scientific_name>
+                                      <common_name>California sea hare</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://upload.wikimedia.org/wikipedia/commons/e/ef/Aplysia_californica.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">225164</id>
+                                      <code>LOTGI</code>
+                                      <scientific_name>Lottia gigantea</scientific_name>
+                                      <common_name>Owl limpet</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://nathistoc.bio.uci.edu/Molluscs/OwlLimpet1.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">6545</id>
+                                    <scientific_name>Pteriomorphia</scientific_name>
+                                    <synonym>Pteriomorpha</synonym>
+                                    <rank>subclass</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">29159</id>
+                                      <code>CRAGI</code>
+                                      <scientific_name>Crassostrea gigas</scientific_name>
+                                      <authority>Thunberg, 1793</authority>
+                                      <common_name>Pacific oyster</common_name>
+                                      <synonym>Crassotrea gigas</synonym>
+                                      <synonym>Crassostrea angulata</synonym>
+                                      <synonym>Ostrea gigas</synonym>
+                                      <rank>species</rank>
+                                      <uri>http://www.marlin.ac.uk/imgs/o_cragig.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">50426</id>
+                                      <code>PINFU</code>
+                                      <scientific_name>Pinctada fucata</scientific_name>
+                                      <common_name>Pearl oyster</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://www.elrincondelmalacologo.com/Web%20fotos%20marinos%20no%20gasteropodos/Fotos%20coleccion/Pteriidae/Pinctada%20fucata.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">6340</id>
+                                  <scientific_name>Annelida</scientific_name>
+                                  <rank>phylum</rank>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">283909</id>
+                                    <code>CTEXX</code>
+                                    <scientific_name>Capitella teleta</scientific_name>
+                                    <authority>Blake, Grassle &amp; Eckelbarger, 2009</authority>
+                                    <synonym>Capitella sp. I</synonym>
+                                    <rank>species</rank>
+                                    <uri>http://genome.jgi-psf.org/Capca1/capitella.jpg</uri>
+                                  </taxonomy>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">6412</id>
+                                    <code>HELRO</code>
+                                    <scientific_name>Helobdella robusta</scientific_name>
+                                    <common_name>Californian leech</common_name>
+                                    <rank>species</rank>
+                                    <uri>http://genome.jgi-psf.org/Helro1/Helro_leech.jpg</uri>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">6157</id>
+                                <scientific_name>Platyhelminthes</scientific_name>
+                                <rank>phylum</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <scientific_name>Neodermata</scientific_name>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">6179</id>
+                                    <scientific_name>Digenea</scientific_name>
+                                    <common_name>flukes</common_name>
+                                    <rank>subclass</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">6183</id>
+                                      <code>SCHMA</code>
+                                      <scientific_name>Schistosoma mansoni</scientific_name>
+                                      <common_name>Blood fluke</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://animaldiversity.ummz.umich.edu/site/resources/Grzimek_inverts/Trematoda/Schistosoma_mansoni.jpg/medium.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">79923</id>
+                                      <code>CLOSI</code>
+                                      <scientific_name>Clonorchis sinensi</scientific_name>
+                                      <authority>Cobbold, 1875</authority>
+                                      <common_name>Chinese liver fluke</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://people.bethel.edu/~kisrob/VirtualBiology/Planaria/Chlonorchis_sinensis.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">6211</id>
+                                    <code>ECHMU</code>
+                                    <scientific_name>Echinococcus multilocularis</scientific_name>
+                                    <rank>species</rank>
+                                    <uri>http://www.stanford.edu/group/parasites/ParaSites2003/Echinococcus/images/Echino_generalinfo.jpg</uri>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">79327</id>
+                                  <code>SCHMD</code>
+                                  <scientific_name>Schmidtea mediterranea</scientific_name>
+                                  <common_name>Freshwater planarian flatworm</common_name>
+                                  <rank>species</rank>
+                                  <uri>http://www.astrobio.net/images/galleryimages_images/Gallery_Image_8136.jpg</uri>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                          </clade>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <name>Cnidaria</name>
+                        <taxonomy>
+                          <id provider="uniprot">6073</id>
+                          <scientific_name>Cnidaria</scientific_name>
+                          <rank>phylum</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">6102</id>
+                            <scientific_name>Hexacorallia</scientific_name>
+                            <synonym>Ceriantipatharia</synonym>
+                            <synonym>Zoantharia</synonym>
+                            <rank>subclass</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">70779</id>
+                              <code>ACRDI</code>
+                              <scientific_name>Acropora digitifera</scientific_name>
+                              <common_name>Staghorn coral</common_name>
+                              <rank>species</rank>
+                              <uri>http://www.botany.hawaii.edu/basch/uhnpscesu/htms/NPSAcorl/images/acropori/acrdigitif7.jpg</uri>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">45351</id>
+                              <code>NEMVE</code>
+                              <scientific_name>Nematostella vectensis</scientific_name>
+                              <common_name>Starlet sea anemone</common_name>
+                              <rank>species</rank>
+                              <uri>http://genome.jgi-psf.org/Nemve1/Nematostellapolyp.jpg</uri>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">6085</id>
+                            <code>HMAXX</code>
+                            <scientific_name>Hydra magnipapillata</scientific_name>
+                            <authority>Ito, 1947</authority>
+                            <rank>species</rank>
+                            <uri>http://www.ncbi.nlm.nih.gov/UniGene/IMG/6085.gif</uri>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">10228</id>
+                        <code>TRIAD</code>
+                        <scientific_name>Trichoplax adhaerens</scientific_name>
+                        <synonym>Trichoplax reptans</synonym>
+                        <rank>species</rank>
+                        <uri>http://genome.jgi-psf.org/Triad1/placozoan_signorovitch.jpg</uri>
+                      </taxonomy>
+                      <reference doi="10.1073/pnas.0602076103">
+                      </reference>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">27923</id>
+                      <code>MNELE</code>
+                      <scientific_name>Mnemiopsis leidyi</scientific_name>
+                      <authority>A. gassiz, 1865</authority>
+                      <common_name>Sea walnut</common_name>
+                      <synonym>Warty comb jellyfish</synonym>
+                      <rank>species</rank>
+                      <uri>http://images.marinespecies.org/resized/12797_mnemiopsis-leidyi.jpg</uri>
+                      <uri>http://i.livescience.com/images/i/000/014/544/original/mnemiopsis-leidyi-jellyfish-101014-02.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">400682</id>
+                      <code>AMPQE</code>
+                      <scientific_name>Amphimedon queenslandica</scientific_name>
+                      <authority>Hooper &amp; Van Soest, 2006</authority>
+                      <common_name>Sponge</common_name>
+                      <synonym>Reniera sp. JGI-2005</synonym>
+                      <rank>species</rank>
+                      <uri>http://images.marinespecies.org/resized/46694_amphimedon-queenslandica.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">81524</id>
+                    <scientific_name>Codonosigidae</scientific_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">81824</id>
+                      <code>MONBE</code>
+                      <scientific_name>Monosiga brevicollis</scientific_name>
+                      <common_name>Choanoflagellate</common_name>
+                      <rank>species</rank>
+                      <uri>http://genome.jgi-psf.org/Monbr1/Monosiga_1.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">946362</id>
+                      <code>SALS5</code>
+                      <scientific_name>Salpingoeca rosetta</scientific_name>
+                      <synonym>Proterospongia sp. ATCC 50818</synonym>
+                      <synonym>Salpingoeca sp. ATCC 50818</synonym>
+                      <synonym>Proterospongia sp. (strain ATCC 50818 / BSB-021)</synonym>
+                      <rank>species</rank>
+                      <uri>http://cfb.unh.edu/phycokey/Choices/Amoebae_Flagellates_Ciliates/Choanoflagellates/SALPINGOECA/salpingoeca_02_300x240_Kalle%20Olli_botany.ut.ee.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <name>Ichthyophonida &amp; Filasterea</name>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">198625</id>
+                    <scientific_name>Ichthyophonida</scientific_name>
+                    <rank>order</rank>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">4881</id>
+                      <code>AMOPA</code>
+                      <scientific_name>Amoebidium parasiticum</scientific_name>
+                      <rank>species</rank>
+                      <uri>http://www.nhm.ku.edu/~fungi/Ilustgenera/amoebi.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">72019</id>
+                      <code>SARXX</code>
+                      <scientific_name>Sphaeroforma arctica</scientific_name>
+                      <rank>species</rank>
+                      <uri>http://www.sciencedirect.com/cache/MiamiImageURL/1-s2.0-S0168952507000236-gr2.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <scientific_name>Filasterea</scientific_name>
+                  </taxonomy>
+                  <reference doi="10.1371/journal.pone.0002098">
+                  </reference>
+                  <reference>
+                  </reference>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">595528</id>
+                      <code>CAPO3</code>
+                      <scientific_name>Capsaspora owczarzaki (strain ATCC 30864)</scientific_name>
+                      <uri>http://www.berfrois.com/wp-content/uploads/2011/03/Capsaspora_owczarzaki.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">134558</id>
+                      <scientific_name>Ministeria vibrans</scientific_name>
+                      <rank>species</rank>
+                      <uri>http://ars.els-cdn.com/content/image/1-s2.0-S0959437X03001382-gr2.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+            </clade>
+            <clade>
+              <taxonomy>
+                <scientific_name>Holomycota</scientific_name>
+                <synonym>Nucletmycea</synonym>
+              </taxonomy>
+              <reference doi="10.1186/1471-2148-9-272">
+                <desc>Phylogenomic analyses predict sistergroup relationship of nucleariids and Fungi and paraphyly of zygomycetes with significant support</desc>
+              </reference>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">4751</id>
+                  <scientific_name>Fungi</scientific_name>
+                  <rank>kingdom</rank>
+                </taxonomy>
+                <reference doi="10.1186/1741-7007-10-47">
+                  <desc>Phylogenomics supports microsporidia as the earliest diverging clade of sequenced fungi</desc>
+                </reference>
+                <clade>
+                  <name>Dikarya &amp; Mucoromycotina &amp; Kickxellomycotina &amp; Blastocladiomycota &amp; Chytridiomycota &amp; Neocallimastigomycota</name>
+                  <clade>
+                    <name>Dikarya &amp; Mucoromycotina &amp; Kickxellomycotina &amp; Blastocladiomycota &amp; Chytridiomycota</name>
+                    <clade>
+                      <name>Dikarya &amp; Mucoromycotina &amp; Kickxellomycotina &amp; Blastocladiomycota</name>
+                      <clade>
+                        <name>Dikarya &amp; Mucoromycotina &amp; Kickxellomycotina</name>
+                        <clade>
+                          <name>Dikarya &amp; Mucoromycotina</name>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">451864</id>
+                              <scientific_name>Dikarya</scientific_name>
+                              <rank>subkingdom</rank>
+                            </taxonomy>
+                            <reference doi="10.1038/nature05110">
+                            </reference>
+                            <reference>
+                            </reference>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">4890</id>
+                                <scientific_name>Ascomycota</scientific_name>
+                                <rank>phylum</rank>
+                              </taxonomy>
+                              <clade>
+                                <name>Pezizomycotina &amp; Saccharomycetales</name>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">147538</id>
+                                    <scientific_name>Pezizomycotina</scientific_name>
+                                    <synonym>Euascomycota</synonym>
+                                    <rank>subphylum</rank>
+                                  </taxonomy>
+                                  <reference doi="0.3852/mycologia.98.6.1018">
+                                    <desc>A five-gene phylogeny of Pezizomycotina</desc>
+                                  </reference>
+                                  <reference>
+                                  </reference>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">716546</id>
+                                      <scientific_name>Leotiomyceta</scientific_name>
+                                    </taxonomy>
+                                    <clade>
+                                      <name>Sordariomyceta &amp; Dothideomycetes &amp; Trichocomaceae &amp; Lecanoromycetes</name>
+                                      <clade>
+                                        <name>Sordariomyceta &amp; Dothideomycetes &amp; Lecanoromycetes</name>
+                                        <clade>
+                                          <name>Sordariomyceta &amp; Lecanoromycetes</name>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">715989</id>
+                                              <scientific_name>Sordariomyceta</scientific_name>
+                                            </taxonomy>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">147550</id>
+                                                <scientific_name>Sordariomycetes</scientific_name>
+                                                <rank>class</rank>
+                                              </taxonomy>
+                                              <clade>
+                                                <name>Magnaporthales &amp; Hypocreales</name>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">5125</id>
+                                                    <scientific_name>Hypocreales</scientific_name>
+                                                    <rank>order</rank>
+                                                  </taxonomy>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">398408</id>
+                                                      <code>AALXX</code>
+                                                      <scientific_name>Acremonium alcalophilum</scientific_name>
+                                                      <rank>species</rank>
+                                                      <uri>http://genome.jgi-psf.org/public/Acral1_c3a/Acral1.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">229533</id>
+                                                      <code>GIBZE</code>
+                                                      <scientific_name>Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)</scientific_name>
+                                                      <common_name>Wheat head blight fungus</common_name>
+                                                      <synonym>Fusarium graminearum</synonym>
+                                                      <synonym>Gibberella zeae PH-1</synonym>
+                                                      <rank>strain</rank>
+                                                      <uri>http://www.apsnet.org/publications/apsnetfeatures/PublishingImages/1999%20Features/Fusarium02sm.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">413071</id>
+                                                      <code>HYPVG</code>
+                                                      <scientific_name>Hypocrea virens (strain Gv29-8 / FGSC 10586)</scientific_name>
+                                                      <common_name>Gliocladium virens</common_name>
+                                                      <synonym>Trichoderma virens</synonym>
+                                                      <synonym>Gliocladium flavofuscum</synonym>
+                                                      <synonym>Trichoderma virens Gv29-8</synonym>
+                                                      <synonym>Gliocladium virens</synonym>
+                                                      <rank>strain</rank>
+                                                      <uri>http://www.ars.usda.gov/images/docs/10920_11114/Stroma1.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">148305</id>
+                                                    <code>MAGGR</code>
+                                                    <scientific_name>Magnaporthe grisea</scientific_name>
+                                                    <common_name>Rice blast fungus</common_name>
+                                                    <synonym>Pyricularia grisea</synonym>
+                                                    <rank>species</rank>
+                                                    <uri>http://www.forestryimages.org/images/768x512/5369002.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">5139</id>
+                                                  <scientific_name>Sordariales</scientific_name>
+                                                  <rank>order</rank>
+                                                </taxonomy>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">35718</id>
+                                                    <scientific_name>Chaetomiaceae</scientific_name>
+                                                    <rank>family</rank>
+                                                  </taxonomy>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">35719</id>
+                                                      <scientific_name>Thielavia</scientific_name>
+                                                      <rank>genus</rank>
+                                                    </taxonomy>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">573729</id>
+                                                        <code>THIHA</code>
+                                                        <scientific_name>Thielavia heterothallica (strain ATCC 42464 / BCRC 31852 / DSM 1799)</scientific_name>
+                                                        <authority>(Apinis) Oorschot 1977</authority>
+                                                        <synonym>Sporotrichum thermophilum</synonym>
+                                                        <synonym>Myceliophthora thermophila</synonym>
+                                                        <rank>species</rank>
+                                                        <uri>http://genome.jgi-psf.org/public/Spoth2/Spoth0.jpg</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">578455</id>
+                                                        <code>THITE</code>
+                                                        <scientific_name>Thielavia terrestris (strain ATCC 38088 / NRRL 8126)</scientific_name>
+                                                        <synonym>Acremonium alabamense</synonym>
+                                                        <synonym>Thielavia terrestris NRRL 8126</synonym>
+                                                        <uri>http://genome.jgi-psf.org/public/Thite2/Thite1.jpg</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">306901</id>
+                                                      <code>CHAGB</code>
+                                                      <scientific_name>Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)</scientific_name>
+                                                      <authority>Kunze 1817</authority>
+                                                      <common_name>Soil fungus</common_name>
+                                                      <rank>strain</rank>
+                                                    </taxonomy>
+                                                  </clade>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">367110</id>
+                                                    <code>NEUCR</code>
+                                                    <scientific_name>Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)</scientific_name>
+                                                    <rank>strain</rank>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">147548</id>
+                                                <scientific_name>Leotiomycetes</scientific_name>
+                                                <rank>class</rank>
+                                              </taxonomy>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">28983</id>
+                                                  <scientific_name>Sclerotiniaceae</scientific_name>
+                                                  <rank>family</rank>
+                                                </taxonomy>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">999810</id>
+                                                    <code>BOTF4</code>
+                                                    <scientific_name>Botryotinia fuckeliana (strain T4)</scientific_name>
+                                                    <common_name>Noble rot fungus</common_name>
+                                                    <synonym>Botrytis cinerea</synonym>
+                                                    <rank>strain</rank>
+                                                  </taxonomy>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">665079</id>
+                                                    <code>SCLS1</code>
+                                                    <scientific_name>Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)</scientific_name>
+                                                    <common_name>White mold</common_name>
+                                                    <synonym>Whetzelinia sclerotiorum</synonym>
+                                                    <rank>strain</rank>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">78148</id>
+                                                  <scientific_name>Oidiodendron maius</scientific_name>
+                                                  <rank>species</rank>
+                                                </taxonomy>
+                                              </clade>
+                                            </clade>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">388435</id>
+                                              <scientific_name>Lecanoromycetidae</scientific_name>
+                                              <rank>subclass</rank>
+                                            </taxonomy>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">27339</id>
+                                                <scientific_name>Cladonia grayi</scientific_name>
+                                                <synonym>Cladonia grayi Merr</synonym>
+                                                <rank>species</rank>
+                                                <uri>http://upload.wikimedia.org/wikipedia/commons/b/b6/Cladonia_grayi-11.jpg</uri>
+                                              </taxonomy>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">107463</id>
+                                                <scientific_name>Xanthoria parietina</scientific_name>
+                                                <rank>species</rank>
+                                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/7/70/Xanthoria_parietina_%2806_03_31%29.jpg/800px-Xanthoria_parietina_%2806_03_31%29.jpg</uri>
+                                              </taxonomy>
+                                            </clade>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">147541</id>
+                                            <scientific_name>Dothideomycetes</scientific_name>
+                                            <common_name>bitunicate ascomycetes</common_name>
+                                            <rank>class</rank>
+                                          </taxonomy>
+                                          <reference doi="10.3114/sim.2009.64.01">
+                                            <desc>A class-wide phylogenetic assessment of Dothideomycetes</desc>
+                                          </reference>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">451867</id>
+                                              <scientific_name>Dothideomycetidae</scientific_name>
+                                              <rank>subclass</rank>
+                                            </taxonomy>
+                                            <reference doi="10.3852/mycologia.98.6.1041">
+                                              <desc>A multigene phylogeny of the Dothideomycetes using four nuclear loci</desc>
+                                            </reference>
+                                            <reference>
+                                            </reference>
+                                            <reference>
+                                            </reference>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">134362</id>
+                                                <scientific_name>Capnodiales</scientific_name>
+                                                <rank>order</rank>
+                                              </taxonomy>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">41254</id>
+                                                  <scientific_name>Mycosphaerella</scientific_name>
+                                                  <rank>genus</rank>
+                                                </taxonomy>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">83344</id>
+                                                    <code>PFIXX</code>
+                                                    <scientific_name>Pseudocercospora fijiensis</scientific_name>
+                                                    <synonym>Mycosphaerella fijiensis</synonym>
+                                                    <rank>species</rank>
+                                                  </taxonomy>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">336722</id>
+                                                    <code>MYCGM</code>
+                                                    <scientific_name>Mycosphaerella graminicola (strain CBS 115943 / IPO323)</scientific_name>
+                                                    <common_name>Speckled leaf blotch fungus</common_name>
+                                                    <synonym>Zymoseptoria tritici IPO323</synonym>
+                                                    <synonym>Mycosphaerella graminicola IPO323</synonym>
+                                                    <synonym>Septoria tritici</synonym>
+                                                    <rank>strain</rank>
+                                                  </taxonomy>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">64363</id>
+                                                    <code>MYCPJ</code>
+                                                    <scientific_name>Mycosphaerella pini</scientific_name>
+                                                    <common_name>Red band needle blight disease fungus</common_name>
+                                                    <synonym>Dothistroma septosporum</synonym>
+                                                    <synonym>Dothistroma pini</synonym>
+                                                    <rank>species</rank>
+                                                  </taxonomy>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">692275</id>
+                                                    <code>MPSXX</code>
+                                                    <scientific_name>Mycosphaerella populorum SO2202</scientific_name>
+                                                    <synonym>Septoria musiva SO2202</synonym>
+                                                    <uri>http://genome.jgi-psf.org/public/Sepmu1/Septoria-musiva-colony-abundantly-sporulating-2.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">430998</id>
+                                                  <code>BCOXX</code>
+                                                  <scientific_name>Baudoinia compniacensis</scientific_name>
+                                                  <common_name>Angels&apos; Share fungus</common_name>
+                                                  <synonym>Torula compniacensis</synonym>
+                                                  <rank>species</rank>
+                                                  <uri>http://www.botanicalgarden.ubc.ca/potd/images/2011/baudoinia-compniacensis2.jpg</uri>
+                                                </taxonomy>
+                                              </clade>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">5580</id>
+                                                <code>AURPU</code>
+                                                <scientific_name>Aureobasidium pullulans</scientific_name>
+                                                <common_name>Black yeast</common_name>
+                                                <synonym>Pullularia pullulans</synonym>
+                                                <rank>species</rank>
+                                              </taxonomy>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">178873</id>
+                                                  <code>APPXX</code>
+                                                  <scientific_name>Aureobasidium pullulans var. pullulans</scientific_name>
+                                                  <rank>varietas</rank>
+                                                </taxonomy>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">46634</id>
+                                                  <code>APMXX</code>
+                                                  <scientific_name>Aureobasidium pullulans var. melanogenum</scientific_name>
+                                                  <rank>varietas</rank>
+                                                  <uri>http://genome.jgi-psf.org/public/Aurpu_var_mel1/Aurpu_var_mel1_P1010309ApM+(2).JPG</uri>
+                                                </taxonomy>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">1042127</id>
+                                                  <code>APSXX</code>
+                                                  <scientific_name>Aureobasidium pullulans var. subglaciale</scientific_name>
+                                                  <synonym>Aureobasidium pullulans var. nov. PZ-2008</synonym>
+                                                  <rank>varietas</rank>
+                                                </taxonomy>
+                                              </clade>
+                                            </clade>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">715340</id>
+                                              <scientific_name>Pleosporineae</scientific_name>
+                                              <rank>suborder</rank>
+                                            </taxonomy>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">28556</id>
+                                                <scientific_name>Pleosporaceae</scientific_name>
+                                                <rank>family</rank>
+                                              </taxonomy>
+                                              <clade>
+                                                <name>Cochliobolus &amp; Setosphaeria</name>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">45130</id>
+                                                    <code>COCSA</code>
+                                                    <scientific_name>Cochliobolus sativus</scientific_name>
+                                                    <synonym>Bipolaris sorokiniana</synonym>
+                                                    <rank>species</rank>
+                                                    <uri>http://www.plantmanagementnetwork.org/pub/php/diagnosticguide/2003/rootrot/image/mathre6sm.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">93612</id>
+                                                    <code>SETTU</code>
+                                                    <scientific_name>Setosphaeria turcica</scientific_name>
+                                                    <authority>(Luttr.) K.J. Leonard &amp; Suggs, (1974)</authority>
+                                                    <common_name>Northern corn leaf blight disease fungus</common_name>
+                                                    <synonym>Exserohilum turcicum</synonym>
+                                                    <synonym>Helminthosporium turcicum</synonym>
+                                                    <rank>species</rank>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">426418</id>
+                                                  <code>PYRTR</code>
+                                                  <scientific_name>Pyrenophora tritici-repentis (strain Pt-1C-BFP)</scientific_name>
+                                                  <common_name>Wheat tan spot fungus</common_name>
+                                                  <synonym>Drechslera tritici-repentis</synonym>
+                                                  <rank>strain</rank>
+                                                </taxonomy>
+                                              </clade>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">321614</id>
+                                                <code>PHANO</code>
+                                                <scientific_name>Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)</scientific_name>
+                                                <common_name>Glume blotch fungus</common_name>
+                                                <synonym>Septoria nodorum</synonym>
+                                                <rank>strain</rank>
+                                              </taxonomy>
+                                            </clade>
+                                          </clade>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">28568</id>
+                                          <scientific_name>Trichocomaceae</scientific_name>
+                                          <rank>family</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">5052</id>
+                                            <scientific_name>Aspergillus</scientific_name>
+                                            <rank>genus</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">332952</id>
+                                              <code>ASPFN</code>
+                                              <scientific_name>Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)</scientific_name>
+                                              <synonym>Aspergillus flavus NRRL3357</synonym>
+                                              <rank>strain</rank>
+                                              <uri>http://www.jhunewsletter.com/wp-content/uploads/2012/11/b8fungi.jpeg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">425011</id>
+                                              <code>ASPNC</code>
+                                              <scientific_name>Aspergillus niger (strain CBS 513.88 / FGSC A1513)</scientific_name>
+                                              <synonym>Aspergillus niger CBS 513.88</synonym>
+                                              <rank>strain</rank>
+                                              <uri>http://www.vetmed.wisc.edu/students/vetmycology/15.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">344612</id>
+                                              <code>ASPCL</code>
+                                              <scientific_name>Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)</scientific_name>
+                                              <synonym>Aspergillus clavatus NRRL 1</synonym>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <name>Neosartorya &amp; Emericella</name>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">227321</id>
+                                              <code>EMENI</code>
+                                              <scientific_name>Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)</scientific_name>
+                                              <authority>Vuill. 1927</authority>
+                                              <synonym>Aspergillus nidulans</synonym>
+                                              <rank>strain</rank>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">331117</id>
+                                              <code>NEOFI</code>
+                                              <scientific_name>Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)</scientific_name>
+                                              <synonym>Aspergillus fischerianus</synonym>
+                                              <rank>strain</rank>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">33183</id>
+                                        <scientific_name>Onygenales</scientific_name>
+                                        <rank>order</rank>
+                                      </taxonomy>
+                                      <reference>
+                                        <desc>The Ajellomycetaceae, a new family of vertebrate-associated Onygenales</desc>
+                                      </reference>
+                                      <reference>
+                                      </reference>
+                                      <clade>
+                                        <name>mitosporic Onygenales &amp; Onygenaceae</name>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">246410</id>
+                                            <code>COCIM</code>
+                                            <scientific_name>Coccidioides immitis (strain RS)</scientific_name>
+                                            <common_name>Valley fever fungus</common_name>
+                                            <synonym>Coccidioides immitis RS</synonym>
+                                          </taxonomy>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">336963</id>
+                                            <code>UNCRE</code>
+                                            <scientific_name>Uncinocarpus reesii (strain UAMH 1704)</scientific_name>
+                                            <rank>strain</rank>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">447093</id>
+                                          <code>AJECG</code>
+                                          <scientific_name>Ajellomyces capsulata (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432)</scientific_name>
+                                          <common_name>Darling&apos;s disease fungus</common_name>
+                                          <synonym>Histoplasma capsulatum</synonym>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">656061</id>
+                                      <code>TUBMM</code>
+                                      <scientific_name>Tuber melanosporum (strain Mel28)</scientific_name>
+                                      <common_name>Perigord black truffle</common_name>
+                                      <synonym>Tuber melanosporum Mel28</synonym>
+                                      <rank>strain</rank>
+                                      <uri>http://www.trufamania.com/trufas/Tuber%20melanosporum02.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">4892</id>
+                                    <scientific_name>Saccharomycetales</scientific_name>
+                                    <common_name>budding yeasts</common_name>
+                                    <rank>order</rank>
+                                  </taxonomy>
+                                  <reference doi="10.1186/1471-2148-6-99">
+                                    <desc>A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis</desc>
+                                  </reference>
+                                  <reference>
+                                  </reference>
+                                  <clade>
+                                    <name>mitosporic Saccharomycetales &amp; Debaryomycetaceae &amp; Saccharomycetaceae</name>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">4893</id>
+                                        <scientific_name>Saccharomycetaceae</scientific_name>
+                                        <rank>family</rank>
+                                      </taxonomy>
+                                      <clade>
+                                        <name>Naumovozyma &amp; Saccharomyces</name>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">1064592</id>
+                                            <code>NAUCC</code>
+                                            <scientific_name>Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630)</scientific_name>
+                                            <common_name>Yeast</common_name>
+                                            <synonym>Saccharomyces castellii</synonym>
+                                            <rank>strain</rank>
+                                          </taxonomy>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">559292</id>
+                                            <code>YEAST</code>
+                                            <scientific_name>Saccharomyces cerevisiae (strain ATCC 204508 / S288c)</scientific_name>
+                                            <common_name>Baker&apos;s yeast</common_name>
+                                            <rank>strain</rank>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <name>Eremothecium &amp; Kluyveromyces</name>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">284590</id>
+                                            <code>KLULA</code>
+                                            <scientific_name>Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)</scientific_name>
+                                            <common_name>Yeast</common_name>
+                                            <synonym>Candida sphaerica</synonym>
+                                            <synonym>Kluyveromyces lactis NRRL Y-1140</synonym>
+                                          </taxonomy>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">284811</id>
+                                            <code>ASHGO</code>
+                                            <scientific_name>Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)</scientific_name>
+                                            <common_name>Yeast</common_name>
+                                            <synonym>Eremothecium gossypii</synonym>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <name>Debaryomyces &amp; Candida</name>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">5475</id>
+                                          <scientific_name>Candida</scientific_name>
+                                          <synonym>Torulopsis</synonym>
+                                          <rank>genus</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">237561</id>
+                                            <code>CANAL</code>
+                                            <scientific_name>Candida albicans (strain SC5314 / ATCC MYA-2876)</scientific_name>
+                                            <common_name>Yeast</common_name>
+                                            <rank>strain</rank>
+                                          </taxonomy>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">294747</id>
+                                            <code>CANTT</code>
+                                            <scientific_name>Candida tropicalis (strain ATCC MYA-3404 / T1)</scientific_name>
+                                            <common_name>Yeast</common_name>
+                                            <rank>strain</rank>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">284592</id>
+                                          <code>DEBHA</code>
+                                          <scientific_name>Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)</scientific_name>
+                                          <common_name>Yeast</common_name>
+                                          <synonym>Torulaspora hansenii</synonym>
+                                          <synonym>Debaryomyces hansenii CBS767</synonym>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">284591</id>
+                                      <code>YARLI</code>
+                                      <scientific_name>Yarrowia lipolytica (strain CLIB 122 / E 150)</scientific_name>
+                                      <common_name>Yeast</common_name>
+                                      <synonym>Candida lipolytica</synonym>
+                                      <rank>strain</rank>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">451866</id>
+                                  <scientific_name>Taphrinomycotina</scientific_name>
+                                  <rank>subphylum</rank>
+                                </taxonomy>
+                                <clade>
+                                  <name>Pneumocystidomycetes &amp; Schizosaccharomycetes</name>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">4895</id>
+                                      <scientific_name>Schizosaccharomyces</scientific_name>
+                                      <rank>genus</rank>
+                                    </taxonomy>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">402676</id>
+                                        <code>SCHJY</code>
+                                        <scientific_name>Schizosaccharomyces japonicus (strain yFS275 / FY16936)</scientific_name>
+                                        <common_name>Fission yeast</common_name>
+                                        <rank>strain</rank>
+                                      </taxonomy>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">4899</id>
+                                        <code>SCHOT</code>
+                                        <scientific_name>Schizosaccharomyces octosporus</scientific_name>
+                                        <common_name>Fission yeast</common_name>
+                                        <rank>species</rank>
+                                        <uri>http://www.dipbot.unict.it/sistematica/Immagini/12002.JPG</uri>
+                                      </taxonomy>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">284812</id>
+                                        <code>SCHPO</code>
+                                        <scientific_name>Schizosaccharomyces pombe (strain 972 / ATCC 24843)</scientific_name>
+                                        <common_name>Fission yeast</common_name>
+                                        <rank>strain</rank>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">4754</id>
+                                      <code>PNECA</code>
+                                      <scientific_name>Pneumocystis carinii</scientific_name>
+                                      <rank>species</rank>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">5606</id>
+                                    <scientific_name>Saitoella complicata</scientific_name>
+                                    <rank>species</rank>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">5204</id>
+                                <scientific_name>Basidiomycota</scientific_name>
+                                <rank>phylum</rank>
+                              </taxonomy>
+                              <clade>
+                                <name>Agaricomycotina &amp; Ustilaginomycotina &amp; Pucciniomycotina</name>
+                                <clade>
+                                  <name>Agaricomycotina &amp; Ustilaginomycotina</name>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">5302</id>
+                                      <scientific_name>Agaricomycotina</scientific_name>
+                                    </taxonomy>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">155619</id>
+                                        <scientific_name>Homobasidiomycetes</scientific_name>
+                                        <rank>class</rank>
+                                      </taxonomy>
+                                      <reference doi="10.1098/rspb.2002.2123">
+                                        <desc>Evolution of complex fruiting–body morphologies in homobasidiomycetes</desc>
+                                      </reference>
+                                      <clade>
+                                        <name>Agaricomycetidae &amp; Gloeophyllum &amp; Aphyllophorales</name>
+                                        <clade>
+                                          <name>Agaricomycetidae &amp; Gloeophyllum</name>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">452333</id>
+                                              <scientific_name>Agaricomycetidae</scientific_name>
+                                              <rank>subclass</rank>
+                                            </taxonomy>
+                                            <clade>
+                                              <name>Agaricales &amp; Boletales</name>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">5338</id>
+                                                  <scientific_name>Agaricales</scientific_name>
+                                                  <rank>order</rank>
+                                                </taxonomy>
+                                                <clade>
+                                                  <name>Agaricus &amp; Coprinopsis &amp; Laccaria &amp; Pleurotus</name>
+                                                  <clade>
+                                                    <name>Agaricus &amp; Coprinopsis &amp; Laccaria</name>
+                                                    <clade>
+                                                      <name>Agaricus &amp; Coprinopsis</name>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">597362</id>
+                                                          <code>AGABU</code>
+                                                          <scientific_name>Agaricus bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392)</scientific_name>
+                                                          <common_name>White button mushroom</common_name>
+                                                          <synonym>Agaricus bisporus var. burnettii JB137-S8</synonym>
+                                                          <uri>http://www.mykoweb.com/CAF/photos/Agaricus_bisporus(fs-03).jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                      <clade>
+                                                        <taxonomy>
+                                                          <id provider="uniprot">5346</id>
+                                                          <code>COPC7</code>
+                                                          <scientific_name>Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)</scientific_name>
+                                                          <common_name>Inky cap fungus</common_name>
+                                                          <synonym>Hormographiella aspergillata</synonym>
+                                                          <rank>strain</rank>
+                                                          <uri>http://upload.wikimedia.org/wikipedia/commons/e/e9/Coprinopsis.cinerea.-.lindsey.jpg</uri>
+                                                        </taxonomy>
+                                                      </clade>
+                                                    </clade>
+                                                    <clade>
+                                                      <taxonomy>
+                                                        <id provider="uniprot">486041</id>
+                                                        <code>LACBS</code>
+                                                        <scientific_name>Laccaria bicolor</scientific_name>
+                                                        <common_name>Bicoloured deceiver</common_name>
+                                                        <synonym>Laccaria laccata var. bicolor</synonym>
+                                                        <synonym>Laccaria bicolor S238N-H82</synonym>
+                                                        <rank>strain</rank>
+                                                        <uri>http://botit.botany.wisc.edu/toms_fungi/images/L_bicolor_NM.JPG</uri>
+                                                      </taxonomy>
+                                                    </clade>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">206324</id>
+                                                      <scientific_name>Gymnopus luxurians</scientific_name>
+                                                      <rank>species</rank>
+                                                      <uri>http://www.mushroomexpert.com/images/kuo3/gymnopus_luxurians_02.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">5322</id>
+                                                    <code>PLEOS</code>
+                                                    <scientific_name>Pleurotus ostreatus</scientific_name>
+                                                    <common_name>Oyster mushroom</common_name>
+                                                    <synonym>White-rot fungus</synonym>
+                                                    <rank>species</rank>
+                                                    <uri>http://botit.botany.wisc.edu/toms_fungi/images/post1.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <taxonomy>
+                                                  <id provider="uniprot">68889</id>
+                                                  <scientific_name>Boletales</scientific_name>
+                                                  <synonym>Melanogastrales</synonym>
+                                                  <synonym>Sclerodermatales</synonym>
+                                                  <rank>order</rank>
+                                                </taxonomy>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">227334</id>
+                                                    <scientific_name>Coniophorineae</scientific_name>
+                                                    <rank>suborder</rank>
+                                                  </taxonomy>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">80637</id>
+                                                      <code>CPUXX</code>
+                                                      <scientific_name>Coniophora puteana</scientific_name>
+                                                      <authority>Schum. ex Fries</authority>
+                                                      <common_name>cellar fungus</common_name>
+                                                      <rank>species</rank>
+                                                      <uri>http://genome.jgi-psf.org/public/Conpu1/P1240066_dp.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                  <clade>
+                                                    <taxonomy>
+                                                      <id provider="uniprot">578457</id>
+                                                      <code>SERL9</code>
+                                                      <scientific_name>Serpula lacrymans var. lacrymans (strain S7.9)</scientific_name>
+                                                      <common_name>Dry rot fungus</common_name>
+                                                      <uri>http://www.anbg.gov.au/fungi/images/0160.jpg</uri>
+                                                    </taxonomy>
+                                                  </clade>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">388859</id>
+                                                    <scientific_name>Hydnomerulius pinastri</scientific_name>
+                                                    <common_name>Spiny dry rot fungus</common_name>
+                                                    <rank>species</rank>
+                                                    <uri>http://genome.jgi.doe.gov/public/Hydpi1/Hydnomerulius_pinastri.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">202697</id>
+                                                <code>JARXX</code>
+                                                <scientific_name>Jaapia argillacea</scientific_name>
+                                                <rank>species</rank>
+                                                <uri>http://mycor.nancy.inra.fr/blogGenomes/wp-content/uploads/2012/08/IMG_21261.jpg</uri>
+                                              </taxonomy>
+                                            </clade>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">104355</id>
+                                              <code>GLOTR</code>
+                                              <scientific_name>Gloeophyllum trabeum</scientific_name>
+                                              <common_name>Brown rot fungus</common_name>
+                                              <rank>species</rank>
+                                              <uri>http://www.commanster.eu/commanster/Mushrooms/Basidio/SpBasidio/Gloeophyllum.trabeum.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">5303</id>
+                                            <scientific_name>Aphyllophorales</scientific_name>
+                                            <authority>Gäum. (1926)</authority>
+                                            <common_name>Shelf Fungi</common_name>
+                                            <synonym>Polyporales</synonym>
+                                            <rank>order</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">83233</id>
+                                              <scientific_name>Coriolaceae</scientific_name>
+                                              <rank>family</rank>
+                                            </taxonomy>
+                                            <reference doi="10.1017/S1477200005001623">
+                                              <desc>The phylogenetic distribution of resupinate forms across the major clades of mushroom-forming fungi (Homobasidiomycetes)</desc>
+                                            </reference>
+                                            <reference>
+                                            </reference>
+                                            <reference>
+                                            </reference>
+                                            <clade>
+                                              <name>Postia &amp; Fomitopsis &amp; Wolfiporia &amp; Trametes</name>
+                                              <clade>
+                                                <name>Antrodia clade</name>
+                                                <taxonomy>
+                                                  <common_name>Antrodia clade</common_name>
+                                                </taxonomy>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">40483</id>
+                                                    <code>FPIXX</code>
+                                                    <scientific_name>Fomitopsis pinicola</scientific_name>
+                                                    <authority>(Swartz) P. Karsten</authority>
+                                                    <common_name>Red banded polypore</common_name>
+                                                    <synonym>Fomes pinicola</synonym>
+                                                    <synonym>Boletus pinicola</synonym>
+                                                    <rank>species</rank>
+                                                    <uri>http://www.mykoweb.com/CAF/photos/Fomitopsis_pinicola(mgw-02).jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">104341</id>
+                                                    <code>PPLXX</code>
+                                                    <scientific_name>Postia placenta</scientific_name>
+                                                    <synonym>Rhodonia placenta</synonym>
+                                                    <rank>species</rank>
+                                                    <uri>http://www.commanster.eu/commanster/Mushrooms/Polypore/SuPolypore/Postia.placenta.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                              <clade>
+                                                <name>core polyporoid clade</name>
+                                                <taxonomy>
+                                                  <common_name>core polyporoid clade</common_name>
+                                                </taxonomy>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">5325</id>
+                                                    <code>TRAVE</code>
+                                                    <scientific_name>Trametes versicolor</scientific_name>
+                                                    <authority>(L.) Lloyd 1921</authority>
+                                                    <common_name>White-rot fungus</common_name>
+                                                    <synonym>Coriolus versicolor</synonym>
+                                                    <synonym>Bjerkandera versicolor</synonym>
+                                                    <rank>species</rank>
+                                                    <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0304/0521.jpeg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                                <clade>
+                                                  <taxonomy>
+                                                    <id provider="uniprot">742152</id>
+                                                    <code>WOLCO</code>
+                                                    <scientific_name>Wolfiporia cocos (strain MD-104)</scientific_name>
+                                                    <common_name>Brown rot fungus</common_name>
+                                                    <synonym>Wolfiporia cocos MD-104 SS10</synonym>
+                                                    <uri>http://genome.jgi-psf.org/public/Wolco1/W_cocos_CA-b1.jpg</uri>
+                                                  </taxonomy>
+                                                </clade>
+                                              </clade>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">42742</id>
+                                                <code>CERSU</code>
+                                                <scientific_name>Ceriporiopsis subvermispora</scientific_name>
+                                                <rank>species</rank>
+                                              </taxonomy>
+                                            </clade>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">732165</id>
+                                              <code>DICSQ</code>
+                                              <scientific_name>Dichomitus squalens (strain LYAD-421)</scientific_name>
+                                              <common_name>Western red white-rot fungus</common_name>
+                                              <synonym>Dichomitus squalens LYAD-421 SS1</synonym>
+                                              <uri>http://www.fs.fed.us/r3/resources/health/field-guide/images/large/sds-f199-large.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">13563</id>
+                                          <code>HETAN</code>
+                                          <scientific_name>Heterobasidion annosum</scientific_name>
+                                          <common_name>Root rot fungus</common_name>
+                                          <rank>species</rank>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">5215</id>
+                                        <scientific_name>Tremellaceae</scientific_name>
+                                        <rank>family</rank>
+                                      </taxonomy>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">5207</id>
+                                          <code>CRYNE</code>
+                                          <scientific_name>Cryptococcus neoformans</scientific_name>
+                                          <synonym>Filobasidiella neoformans</synonym>
+                                          <rank>species</rank>
+                                        </taxonomy>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="eol">1029985</id>
+                                          <code>TREME</code>
+                                          <scientific_name>Tremella mesenterica</scientific_name>
+                                          <authority>Pers. 1800</authority>
+                                          <common_name>Jelly fungus</common_name>
+                                          <synonym>Yellow Brain</synonym>
+                                          <synonym>Tremella lutescens</synonym>
+                                          <rank>species</rank>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">452284</id>
+                                      <scientific_name>Ustilaginomycotina</scientific_name>
+                                      <rank>subphylum</rank>
+                                    </taxonomy>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">425265</id>
+                                        <code>MALGO</code>
+                                        <scientific_name>Malassezia globosa (strain ATCC MYA-4612 / CBS 7966)</scientific_name>
+                                        <common_name>Dandruff-associated fungus</common_name>
+                                      </taxonomy>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">237631</id>
+                                        <code>USTMA</code>
+                                        <scientific_name>Ustilago maydis (strain 521 / FGSC 9021)</scientific_name>
+                                        <common_name>Corn smut fungus</common_name>
+                                        <rank>species</rank>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">29000</id>
+                                    <scientific_name>Pucciniomycotina</scientific_name>
+                                    <rank>subphylum</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">5258</id>
+                                      <scientific_name>Pucciniales</scientific_name>
+                                      <common_name>rusts</common_name>
+                                      <rank>order</rank>
+                                    </taxonomy>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">747676</id>
+                                        <code>MELLP</code>
+                                        <scientific_name>Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7)</scientific_name>
+                                        <authority>Kleb. 1902</authority>
+                                        <common_name>Poplar leaf rust fungus</common_name>
+                                        <synonym>Melampsora larici-populina 98AG31</synonym>
+                                        <synonym>Melampsora laricis-populina 98AG31</synonym>
+                                        <rank>strain</rank>
+                                      </taxonomy>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">5297</id>
+                                        <code>PUCGR</code>
+                                        <scientific_name>Puccinia graminis</scientific_name>
+                                        <authority>Pers. 1794</authority>
+                                        <common_name>Black stem rust fungus</common_name>
+                                        <rank>species</rank>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">89013</id>
+                                      <scientific_name>mitosporic Sporidiobolales</scientific_name>
+                                    </taxonomy>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">29898</id>
+                                        <code>RHOGR</code>
+                                        <scientific_name>Rhodotorula graminis</scientific_name>
+                                        <common_name>Yeast</common_name>
+                                        <rank>species</rank>
+                                      </taxonomy>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">40563</id>
+                                        <code>SPORO</code>
+                                        <scientific_name>Sporobolomyces roseus</scientific_name>
+                                        <authority>Kluyver &amp; C. B. Niel 1924</authority>
+                                        <rank>species</rank>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">671144</id>
+                                  <code>WALSC</code>
+                                  <scientific_name>Wallemia sebi (strain ATCC MYA-4683 / CBS 633.66)</scientific_name>
+                                  <rank>strain</rank>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">451507</id>
+                              <scientific_name>Mucoromycotina</scientific_name>
+                              <rank>subphylum</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">34489</id>
+                                <scientific_name>Mucoraceae</scientific_name>
+                                <rank>family</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">36080</id>
+                                  <code>MUCCI</code>
+                                  <scientific_name>Mucor circinelloides</scientific_name>
+                                  <synonym>Mucor griseo-roseus</synonym>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">4837</id>
+                                  <code>PHYBL</code>
+                                  <scientific_name>Phycomyces blakesleeanus</scientific_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">64495</id>
+                                  <code>RHIOR</code>
+                                  <scientific_name>Rhizopus oryzae</scientific_name>
+                                  <common_name>Mucormycosis agent</common_name>
+                                  <synonym>Rhizopus delemar</synonym>
+                                  <synonym>Rhizopus arrhizus var. delemar</synonym>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">1069443</id>
+                                <code>MVNXX</code>
+                                <scientific_name>Mortierella verticillata NRRL 6337</scientific_name>
+                                <rank>species</rank>
+                                <uri>http://www.ual.es/GruposInv/myco-ual/galeria17/mortierella.jpg</uri>
+                                <uri>http://www.diark.org/img/species_pict/Mortierella_verticillata</uri>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">61392</id>
+                            <code>CREXX</code>
+                            <scientific_name>Coemansia reversa</scientific_name>
+                            <rank>species</rank>
+                            <uri>http://genome.jgi.doe.gov/public/Coere1/Coemansia.jpg</uri>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">28583</id>
+                          <code>ALLMA</code>
+                          <scientific_name>Allomyces macrogynus</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">4761</id>
+                        <scientific_name>Chytridiomycota</scientific_name>
+                        <common_name>chytrids</common_name>
+                        <synonym>Mastigomycotina</synonym>
+                        <rank>phylum</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">451435</id>
+                          <scientific_name>Chytridiomycetes</scientific_name>
+                          <rank>class</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">684364</id>
+                            <code>BATDJ</code>
+                            <scientific_name>Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211)</scientific_name>
+                            <common_name>Frog chytrid fungus</common_name>
+                            <rank>strain</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">109760</id>
+                            <code>SPIPN</code>
+                            <scientific_name>Spizellomyces punctatus</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">1123529</id>
+                          <code>GONPR</code>
+                          <scientific_name>Gonapodya prolifera</scientific_name>
+                          <authority>A. Fisch. 1892</authority>
+                          <common_name>Aquatic fungus</common_name>
+                          <rank>species</rank>
+                          <uri>http://genome.jgi-psf.org/public/Ganpr1/Picture5.jpg</uri>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">73868</id>
+                      <code>PIRSE</code>
+                      <scientific_name>Piromyces sp. (strain E2)</scientific_name>
+                      <rank>species</rank>
+                      <uri>http://www.bsu.edu/classes/ruch/msa/barr/4-17.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">6029</id>
+                    <scientific_name>Microsporidia</scientific_name>
+                    <rank>phylum</rank>
+                  </taxonomy>
+                  <reference>
+                    <desc>Disseminated Infection Caused by Novel Species of Microsporidium, Thailand</desc>
+                  </reference>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">6032</id>
+                      <scientific_name>Apansporoblastina</scientific_name>
+                      <rank>suborder</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">6033</id>
+                        <scientific_name>Encephalitozoon</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">284813</id>
+                          <code>ENCCU</code>
+                          <scientific_name>Encephalitozoon cuniculi (strain GB-M1)</scientific_name>
+                          <common_name>Microsporidian parasite</common_name>
+                          <rank>strain</rank>
+                          <uri>http://www.nature.com/modpathol/journal/v15/n5/images/3880566f7.jpg</uri>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">907965</id>
+                          <code>ENCHA</code>
+                          <scientific_name>Encephalitozoon hellem (strain ATCC 50504)</scientific_name>
+                          <common_name>Microsporidian parasite</common_name>
+                          <rank>strain</rank>
+                          <uri>http://ruby.fgcu.edu/courses/davidb/50249/web/Encephalitozoonhellem91.jpg</uri>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <name>Nosematidae &amp; Enterocytozoonidae</name>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">993615</id>
+                          <code>VITCO</code>
+                          <scientific_name>Vittaforma corneae (strain ATCC 50505)</scientific_name>
+                          <common_name>Microsporidian parasite</common_name>
+                          <synonym>Nosema corneum</synonym>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">481877</id>
+                          <code>ENTBH</code>
+                          <scientific_name>Enterocytozoon bieneusi (strain H348)</scientific_name>
+                          <common_name>Microsporidian parasite</common_name>
+                          <uri>http://www.biolib.cz/IMG/GAL/17310.jpg</uri>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">35232</id>
+                      <scientific_name>Pleistophoridae</scientific_name>
+                      <rank>family</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">72359</id>
+                        <code>TRAHO</code>
+                        <scientific_name>Trachipleistophora hominis</scientific_name>
+                        <common_name>Microsporidian parasite</common_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">948595</id>
+                        <code>VAVCU</code>
+                        <scientific_name>Vavraia culicis (isolate floridensis)</scientific_name>
+                        <common_name>Microsporidian parasite</common_name>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">1003232</id>
+                      <code>EDHAE</code>
+                      <scientific_name>Edhazardia aedis (strain USNM 41457)</scientific_name>
+                      <common_name>Microsporidian parasite</common_name>
+                      <uri>http://wwx.inhs.illinois.edu/files/6813/4021/9153/4Edhazardia_aedis.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">1001604</id>
+                  <scientific_name>Nucleariidae and Fonticula group</scientific_name>
+                </taxonomy>
+                <reference doi="10.1093/molbev/msp185">
+                  <desc>Phylogeny of the ï¿½Forgotten� Cellular Slime Mold, Fonticula alba, Reveals a Key Evolutionary Branch within Opisthokonta</desc>
+                </reference>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">691883</id>
+                    <code>FALXX</code>
+                    <scientific_name>Fonticula alba</scientific_name>
+                    <authority>Worley, Raper &amp; Hohl. 1979</authority>
+                    <rank>species</rank>
+                    <uri>http://mbe.oxfordjournals.org/content/26/12/2699/F2.medium.gif</uri>
+                  </taxonomy>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">154970</id>
+                    <scientific_name>Nuclearia simplex</scientific_name>
+                    <rank>species</rank>
+                  </taxonomy>
+                </clade>
+              </clade>
+            </clade>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="uniprot">554915</id>
+              <scientific_name>Amoebozoa</scientific_name>
+            </taxonomy>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">33083</id>
+                <scientific_name>Dictyosteliida</scientific_name>
+                <common_name>dictyostelid cellular slime molds</common_name>
+                <rank>order</rank>
+              </taxonomy>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">5782</id>
+                  <scientific_name>Dictyostelium</scientific_name>
+                  <rank>genus</rank>
+                </taxonomy>
+                <reference doi="10.1186/1471-2148-11-84">
+                  <desc>An expanded phylogeny of social amoebas (Dictyostelia) shows increasing diversity and new morphological patterns</desc>
+                </reference>
+                <reference>
+                </reference>
+                <reference>
+                </reference>
+                <clade>
+                  <name>group 4</name>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">44689</id>
+                      <code>DICDI</code>
+                      <scientific_name>Dictyostelium discoideum</scientific_name>
+                      <common_name>Slime mold</common_name>
+                      <rank>species</rank>
+                      <uri>http://www.tins.ne.jp/~tsukubagec/csm.GIF</uri>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">5786</id>
+                      <code>DICPU</code>
+                      <scientific_name>Dictyostelium purpureum</scientific_name>
+                      <common_name>Slime mold</common_name>
+                      <rank>species</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">1054147</id>
+                    <code>DICFS</code>
+                    <scientific_name>Dictyostelium fasciculatum (strain SH3)</scientific_name>
+                    <common_name>Slime mold</common_name>
+                    <rank>strain</rank>
+                  </taxonomy>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">13642</id>
+                  <code>POLPA</code>
+                  <scientific_name>Polysphondylium pallidum</scientific_name>
+                  <common_name>Cellular slime mold</common_name>
+                  <rank>species</rank>
+                  <uri>http://cosmos.bot.kyoto-u.ac.jp/csm/photos2/Pp8s.jpeg</uri>
+                </taxonomy>
+              </clade>
+            </clade>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">5758</id>
+                <scientific_name>Entamoeba</scientific_name>
+                <rank>genus</rank>
+              </taxonomy>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">5759</id>
+                  <code>ENTHI</code>
+                  <scientific_name>Entamoeba histolytica</scientific_name>
+                  <rank>species</rank>
+                  <uri>http://www.dpd.cdc.gov/dpdx/images/ParasiteImages/A-F/Amebiasis/E_histo/Ehistdisp_troph_wtmt2.jpg</uri>
+                </taxonomy>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">370354</id>
+                  <code>ENTDS</code>
+                  <scientific_name>Entamoeba dispar (strain ATCC PRA-260 / SAW760)</scientific_name>
+                </taxonomy>
+              </clade>
+            </clade>
+          </clade>
+        </clade>
+        <clade>
+          <name>Bikonta</name>
+          <reference doi="10.1099/ijs.0.63216-0">
+          </reference>
+          <clade>
+            <name>Plants+HC+SAR megagroup</name>
+            <clade>
+              <name>Plants+HC</name>
+              <clade>
+                <name>Archaeplastida</name>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">33090</id>
+                    <scientific_name>Viridiplantae</scientific_name>
+                    <common_name>green plants</common_name>
+                    <rank>kingdom</rank>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">3193</id>
+                      <scientific_name>Embryophyta</scientific_name>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">58023</id>
+                        <scientific_name>Tracheophyta</scientific_name>
+                        <common_name>vascular plants</common_name>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">58024</id>
+                          <scientific_name>Spermatophyta</scientific_name>
+                          <common_name>seed plants</common_name>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">3398</id>
+                            <scientific_name>Magnoliophyta</scientific_name>
+                            <common_name>flowering plants</common_name>
+                            <synonym>Angiospermae</synonym>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">71240</id>
+                              <scientific_name>eudicotyledons</scientific_name>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">91827</id>
+                                <scientific_name>core eudicotyledons</scientific_name>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">71275</id>
+                                  <scientific_name>rosids</scientific_name>
+                                  <rank>subclass</rank>
+                                </taxonomy>
+                                <clade>
+                                  <name>fabids &amp; malvids</name>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">91835</id>
+                                      <scientific_name>fabids</scientific_name>
+                                    </taxonomy>
+                                    <clade>
+                                      <name>Rosales &amp; Cucurbitales &amp; Fabales</name>
+                                      <clade>
+                                        <name>Rosales &amp; Cucurbitales</name>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">3745</id>
+                                            <scientific_name>Rosaceae</scientific_name>
+                                            <rank>family</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">57918</id>
+                                              <code>FRAVE</code>
+                                              <scientific_name>Fragaria vesca</scientific_name>
+                                              <common_name>Woodland strawberry</common_name>
+                                              <synonym>Fragaria vesca L.</synonym>
+                                              <synonym>European strawberry</synonym>
+                                              <synonym>alpine strawberry</synonym>
+                                              <rank>species</rank>
+                                              <uri>http://www.boga.ruhr-uni-bochum.de/html/Fragaria.vesca.ja6.jpg</uri>
+                                              <uri>http://caliban.mpiz-koeln.mpg.de/thome/band3/tafel_092_small.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">3760</id>
+                                              <code>PRUPE</code>
+                                              <scientific_name>Prunus persica</scientific_name>
+                                              <common_name>Peach</common_name>
+                                              <synonym>Persica vulgaris</synonym>
+                                              <synonym>Amygdalus persica</synonym>
+                                              <rank>species</rank>
+                                              <uri>http://www.mezhenskyjv.narod.ru/foto_sortov/dokaz.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">3659</id>
+                                            <code>CUCSA</code>
+                                            <scientific_name>Cucumis sativus</scientific_name>
+                                            <common_name>Cucumber</common_name>
+                                            <rank>species</rank>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">3814</id>
+                                          <scientific_name>Papilionoideae</scientific_name>
+                                          <rank>subfamily</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">3847</id>
+                                            <code>SOYBN</code>
+                                            <scientific_name>Glycine max</scientific_name>
+                                            <authority>cv. Wye</authority>
+                                            <common_name>Soybean</common_name>
+                                            <synonym>Glycine hispida</synonym>
+                                            <rank>species</rank>
+                                          </taxonomy>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">3880</id>
+                                            <code>MEDTR</code>
+                                            <scientific_name>Medicago truncatula</scientific_name>
+                                            <common_name>Barrel medic</common_name>
+                                            <synonym>Medicago tribuloides</synonym>
+                                            <rank>species</rank>
+                                            <uri>http://crdp.ac-besancon.fr/flore/FABACEAE/photos/medicago_truncatula_30.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">3646</id>
+                                        <scientific_name>Malpighiales</scientific_name>
+                                        <rank>order</rank>
+                                      </taxonomy>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">3977</id>
+                                          <scientific_name>Euphorbiaceae</scientific_name>
+                                          <rank>family</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">3983</id>
+                                            <code>MANES</code>
+                                            <scientific_name>Manihot esculenta</scientific_name>
+                                            <common_name>Tapioca</common_name>
+                                            <synonym>Jatropha manihot</synonym>
+                                            <rank>species</rank>
+                                            <uri>http://upload.wikimedia.org/wikipedia/commons/9/99/Iwata_kenichi_cassava.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">3988</id>
+                                            <code>RICCO</code>
+                                            <scientific_name>Ricinus communis</scientific_name>
+                                            <common_name>Castor bean</common_name>
+                                            <synonym>Ricinus sanguineus</synonym>
+                                            <rank>species</rank>
+                                            <uri>http://nmorganics.net/wp-content/uploads/2011/09/castor.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">3694</id>
+                                          <code>POPTR</code>
+                                          <scientific_name>Populus trichocarpa</scientific_name>
+                                          <common_name>Western balsam poplar</common_name>
+                                          <synonym>Populus balsamifera subsp. trichocarpa</synonym>
+                                          <rank>species</rank>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">91836</id>
+                                      <scientific_name>malvids</scientific_name>
+                                    </taxonomy>
+                                    <clade>
+                                      <name>Brassicales &amp; Sapindales</name>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">3699</id>
+                                          <scientific_name>Brassicales</scientific_name>
+                                          <rank>order</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">3700</id>
+                                            <scientific_name>Brassicaceae</scientific_name>
+                                            <rank>family</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">3701</id>
+                                              <scientific_name>Arabidopsis</scientific_name>
+                                              <rank>genus</rank>
+                                            </taxonomy>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">59689</id>
+                                                <code>ARALY</code>
+                                                <scientific_name>Arabidopsis lyrata</scientific_name>
+                                                <common_name>Lyre-leaved rock-cress</common_name>
+                                                <synonym>Arabis lyrata</synonym>
+                                                <rank>species</rank>
+                                              </taxonomy>
+                                            </clade>
+                                            <clade>
+                                              <taxonomy>
+                                                <id provider="uniprot">3702</id>
+                                                <code>ARATH</code>
+                                                <scientific_name>Arabidopsis thaliana</scientific_name>
+                                                <common_name>Mouse-ear cress</common_name>
+                                                <rank>species</rank>
+                                              </taxonomy>
+                                            </clade>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">98038</id>
+                                              <code>THEHA</code>
+                                              <scientific_name>Thellungiella halophila</scientific_name>
+                                              <common_name>Salt cress</common_name>
+                                              <rank>species</rank>
+                                              <uri>http://mplant.oxfordjournals.org/content/2/1/3/F1.large.jpg</uri>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">3649</id>
+                                            <code>CARPA</code>
+                                            <scientific_name>Carica papaya</scientific_name>
+                                            <common_name>Papaya</common_name>
+                                            <rank>species</rank>
+                                            <uri>http://www.biopix.com/photos/jko-carica-papaya-00412.jpg</uri>
+                                            <uri>http://www.texasriviera.com/greenthumbs/papaya10.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">2706</id>
+                                          <scientific_name>Citrus</scientific_name>
+                                          <rank>genus</rank>
+                                        </taxonomy>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">85681</id>
+                                            <code>CCLXX</code>
+                                            <scientific_name>Citrus clementina</scientific_name>
+                                            <synonym>Citrus clementina hort. ex Tanaka</synonym>
+                                            <rank>species</rank>
+                                            <uri>http://www.citrusgenomedb.org/sites/default/files/tripal/tripal_organism/images/Citrus_clementina.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">2711</id>
+                                            <code>CITSI</code>
+                                            <scientific_name>Citrus sinensis</scientific_name>
+                                            <common_name>Sweet orange</common_name>
+                                            <synonym>Citrus x sinensis</synonym>
+                                            <synonym>Citrus aurantium var. sinensis</synonym>
+                                            <rank>species</rank>
+                                            <uri>http://www.west-crete.com/flowers/photos/citrus_sinensis-1.jpg</uri>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">71139</id>
+                                        <code>EUCGR</code>
+                                        <scientific_name>Eucalyptus grandis</scientific_name>
+                                        <common_name>Flooded gum</common_name>
+                                        <rank>species</rank>
+                                        <uri>http://www.calflora.net/losangelesarboretum/images/eucalyptus_grandis.jpg</uri>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="eol">582304</id>
+                                    <code>VITVI</code>
+                                    <scientific_name>Vitis vinifera</scientific_name>
+                                    <common_name>Grape</common_name>
+                                    <rank>species</rank>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">91888</id>
+                                  <scientific_name>lamiids</scientific_name>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">4070</id>
+                                    <scientific_name>Solanaceae</scientific_name>
+                                    <rank>family</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">4107</id>
+                                      <scientific_name>Solanum</scientific_name>
+                                      <rank>genus</rank>
+                                    </taxonomy>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">49274</id>
+                                        <scientific_name>Lycopersicon</scientific_name>
+                                        <rank>subgenus</rank>
+                                      </taxonomy>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">4081</id>
+                                          <code>SOLLC</code>
+                                          <scientific_name>Solanum lycopersicum</scientific_name>
+                                          <common_name>Tomato</common_name>
+                                          <synonym>Lycopersicon esculentum</synonym>
+                                          <rank>species</rank>
+                                          <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0905/1214.jpeg</uri>
+                                        </taxonomy>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">4084</id>
+                                          <code>SOLPI</code>
+                                          <scientific_name>Solanum pimpinellifolium</scientific_name>
+                                          <common_name>Currant tomato</common_name>
+                                          <synonym>Lycopersicon pimpinellifolium</synonym>
+                                          <rank>species</rank>
+                                          <uri>http://upload.wikimedia.org/wikipedia/commons/b/b8/Currant_tomato.jpg</uri>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">4113</id>
+                                        <code>SOLTU</code>
+                                        <scientific_name>Solanum tuberosum</scientific_name>
+                                        <common_name>Potato</common_name>
+                                        <rank>species</rank>
+                                        <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0508/0344.jpeg</uri>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">4097</id>
+                                      <code>TOBAC</code>
+                                      <scientific_name>Nicotiana tabacum</scientific_name>
+                                      <common_name>Common tobacco</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://calphotos.berkeley.edu/imgs/512x768/0000_0000/0105/2073.jpeg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">4155</id>
+                                    <code>MIMGU</code>
+                                    <scientific_name>Mimulus guttatus</scientific_name>
+                                    <common_name>Yellow monkey flower</common_name>
+                                    <synonym>Yellow monkey flower</synonym>
+                                    <rank>species</rank>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">218851</id>
+                                <code>AQUCA</code>
+                                <scientific_name>Aquilegia caerulea</scientific_name>
+                                <authority>E.James</authority>
+                                <common_name>Rocky mountain columbine</common_name>
+                                <synonym>Aquilegia coerulea</synonym>
+                                <rank>species</rank>
+                                <uri>http://www.wildflower.org/image_archive/320x240/PCD3618/PCD3618_IMG0033.JPG</uri>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">4447</id>
+                              <scientific_name>Liliopsida</scientific_name>
+                              <common_name>monocots</common_name>
+                              <synonym>Monocotyledoneae</synonym>
+                              <rank>class</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">4479</id>
+                                <scientific_name>Poaceae</scientific_name>
+                                <common_name>grass family</common_name>
+                                <synonym>Gramineae</synonym>
+                                <rank>family</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">147369</id>
+                                  <scientific_name>Panicoideae</scientific_name>
+                                  <authority>Link, 1827</authority>
+                                  <synonym>Centothecoideae</synonym>
+                                  <rank>subfamily</rank>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">147429</id>
+                                    <scientific_name>Andropogoneae</scientific_name>
+                                    <authority>Dumort., 1824</authority>
+                                    <rank>tribe</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">4558</id>
+                                      <code>SORBI</code>
+                                      <scientific_name>Sorghum bicolor</scientific_name>
+                                      <common_name>Sorghum</common_name>
+                                      <synonym>Sorghum vulgare</synonym>
+                                      <rank>species</rank>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">4577</id>
+                                      <code>MAIZE</code>
+                                      <scientific_name>Zea mays</scientific_name>
+                                      <common_name>Maize</common_name>
+                                      <rank>species</rank>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">147428</id>
+                                    <scientific_name>Paniceae</scientific_name>
+                                    <rank>tribe</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">38727</id>
+                                      <code>PANVG</code>
+                                      <scientific_name>Panicum virgatum</scientific_name>
+                                      <common_name>switchgrass</common_name>
+                                      <rank>species</rank>
+                                      <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/2/29/PanicumVirgatum.jpg/220px-PanicumVirgatum.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">4555</id>
+                                      <code>SETIT</code>
+                                      <scientific_name>Setaria italica</scientific_name>
+                                      <common_name>Foxtail millet</common_name>
+                                      <synonym>Panicum italicum</synonym>
+                                      <rank>species</rank>
+                                      <uri>http://en.academic.ru/pictures/enwiki/83/Setaria_italica0.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">359160</id>
+                                  <scientific_name>BEP clade</scientific_name>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">4527</id>
+                                    <scientific_name>Oryza</scientific_name>
+                                    <rank>genus</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">4530</id>
+                                      <code>ORYSA</code>
+                                      <scientific_name>Oryza sativa</scientific_name>
+                                      <common_name>Rice</common_name>
+                                      <rank>species</rank>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">39947</id>
+                                      <code>ORYSJ</code>
+                                      <scientific_name>Oryza sativa subsp. japonica</scientific_name>
+                                      <common_name>Rice</common_name>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">147368</id>
+                                    <scientific_name>Pooideae</scientific_name>
+                                    <rank>subfamily</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">15368</id>
+                                      <code>BRADI</code>
+                                      <scientific_name>Brachypodium distachyon</scientific_name>
+                                      <common_name>Purple false brome</common_name>
+                                      <synonym>Trachynia distachya</synonym>
+                                      <rank>species</rank>
+                                      <uri>http://upload.wikimedia.org/wikipedia/commons/0/01/Brachypodium_distachyon_Bd21-3.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">112509</id>
+                                      <code>HORVD</code>
+                                      <scientific_name>Hordeum vulgare var. distichum</scientific_name>
+                                      <common_name>Two-rowed barley</common_name>
+                                      <rank>subspecies</rank>
+                                      <uri>http://www.missouriplants.com/Grasses/Hordeum_vulgare_plant.jpg</uri>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">214687</id>
+                                <code>MUSAM</code>
+                                <scientific_name>Musa acuminata subsp. malaccensis</scientific_name>
+                                <authority>(Ridl.) N.W.Simmonds</authority>
+                                <common_name>Wild banana</common_name>
+                                <synonym>Musa malaccensis</synonym>
+                                <rank>subspecies</rank>
+                                <uri>http://farm5.staticflickr.com/4009/4572831376_07ca3089d1_z.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">3329</id>
+                            <code>PICAB</code>
+                            <scientific_name>Picea abies</scientific_name>
+                            <authority>H.Karst</authority>
+                            <common_name>Norway spruce</common_name>
+                            <synonym>Picea excelsa</synonym>
+                            <rank>species</rank>
+                            <uri>http://pharm1.pharmazie.uni-greifswald.de/allgemei/serturn/arzpfl-b/picea_a.jpg</uri>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">88036</id>
+                          <code>SELML</code>
+                          <scientific_name>Selaginella moellendorffii</scientific_name>
+                          <authority>Hieron</authority>
+                          <common_name>Spikemoss</common_name>
+                          <rank>species</rank>
+                          <uri>http://www.plantsystematics.org/users/robbin/5_22_06/upload121/Selag_moellendorffii3.JPG</uri>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">145481</id>
+                        <code>PHYPA</code>
+                        <scientific_name>Physcomitrella patens subsp. patens</scientific_name>
+                        <common_name>Moss</common_name>
+                        <rank>subspecies</rank>
+                        <uri>http://www.aua.gr/plantdevelopment/Photos2/01%20Physcomitrella%20patens.jpg</uri>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">3041</id>
+                      <scientific_name>Chlorophyta</scientific_name>
+                      <rank>phylum</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">13792</id>
+                        <scientific_name>Mamiellales</scientific_name>
+                        <rank>order</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">70447</id>
+                          <scientific_name>Ostreococcus</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">436017</id>
+                            <code>OSTLU</code>
+                            <scientific_name>Ostreococcus lucimarinus (strain CCE9901)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">385169</id>
+                            <code>ORCXX</code>
+                            <scientific_name>Ostreococcus sp. RCC809</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">70448</id>
+                            <code>OSTTA</code>
+                            <scientific_name>Ostreococcus tauri</scientific_name>
+                            <rank>species</rank>
+                            <uri>http://genome.jgi-psf.org/Ost9901_3/Ostta.jpg</uri>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">38832</id>
+                          <scientific_name>Micromonas</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">564608</id>
+                            <code>MICPC</code>
+                            <scientific_name>Micromonas pusilla (strain CCMP1545)</scientific_name>
+                            <common_name>Picoplanktonic green alga</common_name>
+                            <uri>http://www.mansfield.ohio-state.edu/~sabedon/microfla.jpg</uri>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">296587</id>
+                            <code>MICSR</code>
+                            <scientific_name>Micromonas sp. (strain RCC299 / NOUM17)</scientific_name>
+                            <common_name>Picoplanktonic green alga</common_name>
+                            <synonym>Micromonas sp. RCC299</synonym>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <name>Trebouxiophyceae &amp; Chlorophyceae</name>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">75966</id>
+                          <scientific_name>Trebouxiophyceae</scientific_name>
+                          <rank>class</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">763042</id>
+                            <code>ASCXX</code>
+                            <scientific_name>Asterochloris sp. Cgr/DA1pho</scientific_name>
+                            <rank>species</rank>
+                            <uri>http://genome.jgi-psf.org/Astpho1/Figure_3.jpg</uri>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">554065</id>
+                            <code>CHLVA</code>
+                            <scientific_name>Chlorella variabilis</scientific_name>
+                            <authority>Shihira &amp; Krauss 1965</authority>
+                            <common_name>Green alga</common_name>
+                            <synonym>Chlorella sp. NC64A</synonym>
+                            <synonym>Chlorella sp. Bnd1-ZK</synonym>
+                            <rank>species</rank>
+                            <uri>http://www.sinice.cz/res/image/collection/Chlorella.jpg</uri>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">574566</id>
+                            <code>CSUXX</code>
+                            <scientific_name>Coccomyxa subellipsoidea C-169</scientific_name>
+                            <synonym>Chlorella vulgaris C-169</synonym>
+                            <synonym>Coccomyxa sp. C-169</synonym>
+                            <rank>species</rank>
+                            <uri>http://genome.jgi.doe.gov/Coc_C169_1/Chlvu.jpg</uri>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">3042</id>
+                          <scientific_name>Chlamydomonadales</scientific_name>
+                          <rank>order</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">3055</id>
+                            <code>CHLRE</code>
+                            <scientific_name>Chlamydomonas reinhardtii</scientific_name>
+                            <synonym>Chlamydomonas smithii</synonym>
+                            <rank>species</rank>
+                            <uri>http://genome.jgi-psf.org/Chlre3/chlamy_BG.gif</uri>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">3067</id>
+                            <code>VOLCA</code>
+                            <scientific_name>Volvox carteri</scientific_name>
+                            <common_name>Green alga</common_name>
+                            <rank>species</rank>
+                            <uri>http://genome.jgi-psf.org/Volca1/Volvox.jpg</uri>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">2763</id>
+                    <scientific_name>Rhodophyta</scientific_name>
+                    <common_name>red algae</common_name>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">265316</id>
+                      <scientific_name>Cyanidiaceae</scientific_name>
+                      <rank>family</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">45157</id>
+                        <code>CYAME</code>
+                        <scientific_name>Cyanidioschyzon merolae</scientific_name>
+                        <common_name>Red alga</common_name>
+                        <rank>species</rank>
+                        <uri>http://www.shigen.nig.ac.jp/algae_tree/CyanidiophyceaeIMG.jpg</uri>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">130081</id>
+                        <code>GALSU</code>
+                        <scientific_name>Galdieria sulphuraria</scientific_name>
+                        <common_name>Red alga</common_name>
+                        <rank>species</rank>
+                        <uri>http://phenomena.nationalgeographic.com/files/2013/03/Alga.jpg</uri>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">2769</id>
+                      <code>CHOCR</code>
+                      <scientific_name>Chondrus crispus</scientific_name>
+                      <common_name>Carragheen moss</common_name>
+                      <synonym>Irish moss</synonym>
+                      <rank>species</rank>
+                      <uri>http://www.seaweed.ie/_images/MG3_0485.png</uri>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">38254</id>
+                    <scientific_name>Glaucocystophyceae</scientific_name>
+                    <synonym>Glaucophyta</synonym>
+                    <rank>class</rank>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">2762</id>
+                      <code>CYAPA</code>
+                      <scientific_name>Cyanophora paradoxa</scientific_name>
+                      <rank>species</rank>
+                      <uri>http://www.people.vcu.edu/~rfisher/paradoxa.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">38271</id>
+                      <scientific_name>Glaucocystis nostochinearum</scientific_name>
+                      <rank>species</rank>
+                      <uri>http://protist.i.hosei.ac.jp/pdb/images/Others/Glaucocystis/sp_02.jpg</uri>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <name>Hacrobia (Cryptophyta &amp; Haptophyceae &amp; Centroheliozoa)</name>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">2903</id>
+                    <code>EMIHU</code>
+                    <scientific_name>Emiliania huxleyi</scientific_name>
+                    <synonym>Pontosphaera huxleyi</synonym>
+                    <rank>species</rank>
+                    <uri>http://research.kahaku.go.jp/zoology/kaisei/hp-2/images/hapto.jpg</uri>
+                  </taxonomy>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">55529</id>
+                    <code>GUITH</code>
+                    <scientific_name>Guillardia theta</scientific_name>
+                    <synonym>Cryptomonas phi</synonym>
+                    <rank>species</rank>
+                    <uri>http://genome.jgi.doe.gov/public/Guith1/Gtheta_SEM.jpg</uri>
+                  </taxonomy>
+                  <reference doi="10.1016/j.cub.2007.03.069">
+                    <desc>Multiple Gene Phylogenies Support the Monophyly of Cryptomonad and Haptophyte Host Lineages</desc>
+                  </reference>
+                  <reference>
+                  </reference>
+                </clade>
+              </clade>
+            </clade>
+            <clade>
+              <name>Stramenopiles &amp; Alveolata &amp; Rhizaria</name>
+              <reference doi="10.1186/1471-2148-10-377">
+                <desc>Evolution of Rhizaria: new insights from phylogenomic analysis of uncultivated protists</desc>
+              </reference>
+              <reference>
+              </reference>
+              <clade>
+                <name>Stramenopiles &amp; Alveolata</name>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">33630</id>
+                    <scientific_name>Alveolata</scientific_name>
+                    <rank>superphylum</rank>
+                  </taxonomy>
+                  <clade>
+                    <name>Apicomplexa &amp; Dinophyceae</name>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">5794</id>
+                        <scientific_name>Apicomplexa</scientific_name>
+                        <rank>phylum</rank>
+                      </taxonomy>
+                      <reference doi="10.1101/gr.083386.108">
+                        <desc>The origins of apicomplexan sequence innovation (2009)</desc>
+                      </reference>
+                      <reference>
+                      </reference>
+                      <clade>
+                        <name>Aconoidasida &amp; Coccidia</name>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">422676</id>
+                            <scientific_name>Aconoidasida</scientific_name>
+                            <authority>Mehlhorn et al. 1980</authority>
+                            <synonym>Hematozoa</synonym>
+                            <rank>class</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">5820</id>
+                              <scientific_name>Plasmodium</scientific_name>
+                              <rank>genus</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">5825</id>
+                                <code>PLACH</code>
+                                <scientific_name>Plasmodium chabaudi</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">36329</id>
+                                <code>PLAF7</code>
+                                <scientific_name>Plasmodium falciparum (isolate 3D7)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">73239</id>
+                                <code>PLAYO</code>
+                                <scientific_name>Plasmodium yoelii yoelii</scientific_name>
+                                <rank>subspecies</rank>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">126793</id>
+                                <code>PLAVS</code>
+                                <scientific_name>Plasmodium vivax (strain Salvador I)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">5863</id>
+                              <scientific_name>Piroplasmida</scientific_name>
+                              <common_name>Piroplasmids</common_name>
+                              <rank>order</rank>
+                            </taxonomy>
+                            <clade>
+                              <name>Theileria</name>
+                              <taxonomy>
+                                <id provider="uniprot">5873</id>
+                                <scientific_name>Theileria</scientific_name>
+                                <rank>genus</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">5874</id>
+                                  <code>THEAN</code>
+                                  <scientific_name>Theileria annulata</scientific_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">5875</id>
+                                  <code>THEPA</code>
+                                  <scientific_name>Theileria parva</scientific_name>
+                                  <common_name>East coast fever infection agent</common_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">5865</id>
+                                <code>BABBO</code>
+                                <scientific_name>Babesia bovis</scientific_name>
+                                <rank>species</rank>
+                                <uri>http://www.perulactea.com/wp-content/uploads/2012/03/Babesia_bovis.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">5796</id>
+                            <scientific_name>Coccidia</scientific_name>
+                            <common_name>coccidians</common_name>
+                            <rank>subclass</rank>
+                          </taxonomy>
+                          <reference doi="10.1093/molbev/msn213">
+                            <desc>The Apicomplexan Whole-Genome Phylogeny: An Analysis of Incongruence among Gene Trees</desc>
+                          </reference>
+                          <reference>
+                          </reference>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">5802</id>
+                              <code>EIMTE</code>
+                              <scientific_name>Eimeria tenella</scientific_name>
+                              <common_name>Coccidian parasite</common_name>
+                              <rank>species</rank>
+                              <uri>http://www.k-state.edu/parasitology/625tutorials/FIGtenella.jpg</uri>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">5811</id>
+                              <code>TOXGO</code>
+                              <scientific_name>Toxoplasma gondii</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">5806</id>
+                          <scientific_name>Cryptosporidium</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">237895</id>
+                            <code>CRYHO</code>
+                            <scientific_name>Cryptosporidium hominis</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">5807</id>
+                            <code>CRYPV</code>
+                            <scientific_name>Cryptosporidium parvum</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">353152</id>
+                            <code>CRYPI</code>
+                            <scientific_name>Cryptosporidium parvum (strain Iowa II)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">2864</id>
+                        <scientific_name>Dinophyceae</scientific_name>
+                        <authority>Fritsch, 1927</authority>
+                        <common_name>dinoflagellates</common_name>
+                        <synonym>Chromophyta</synonym>
+                        <synonym>Dinoflagellata</synonym>
+                        <synonym>Pyrrophyta</synonym>
+                        <rank>class</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">2866</id>
+                          <code>CRYCO</code>
+                          <scientific_name>Crypthecodinium cohnii</scientific_name>
+                          <common_name>Dinoflagellate</common_name>
+                          <rank>species</rank>
+                          <uri>http://www.lamolina.net/image/DHAcell.jpg</uri>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">2923</id>
+                          <code>THOHE</code>
+                          <scientific_name>Thoracosphaera heimii</scientific_name>
+                          <common_name>Dinoflagellate</common_name>
+                          <rank>species</rank>
+                          <uri>http://planktonnet.awi.de/repository/rawdata-PlanktonNet2/viewable/fjouenne_21806a_20080123172436_small.jpg</uri>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">5878</id>
+                      <scientific_name>Ciliophora</scientific_name>
+                      <common_name>ciliates</common_name>
+                      <rank>phylum</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">431838</id>
+                        <scientific_name>Intramacronucleata</scientific_name>
+                        <rank>subphylum</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">6020</id>
+                          <scientific_name>Oligohymenophorea</scientific_name>
+                          <rank>class</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">5888</id>
+                            <code>PARTE</code>
+                            <scientific_name>Paramecium tetraurelia</scientific_name>
+                            <rank>species</rank>
+                            <uri>http://research.plattsburgh.edu/ciliates/images/jdopics208.jpg</uri>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">312017</id>
+                            <code>TETTS</code>
+                            <scientific_name>Tetrahymena thermophila (strain SB210)</scientific_name>
+                            <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/0/08/Tetrahymena_thermophila.png/220px-Tetrahymena_thermophila.png</uri>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">1172189</id>
+                          <code>OTRXX</code>
+                          <scientific_name>Oxytricha trifallax</scientific_name>
+                          <authority>Stein, 1859</authority>
+                          <rank>species</rank>
+                          <uri>http://centexnaturalist.com/foldermainmenus/sfprotists/folderprotozoans/oxytricha04.gif</uri>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">5961</id>
+                        <code>BLEJA</code>
+                        <scientific_name>Blepharisma japonicum</scientific_name>
+                        <rank>species</rank>
+                        <uri>http://upload.wikimedia.org/wikipedia/commons/2/23/Mikrofoto.de-Blepharisma_japonicum_15.jpg</uri>
+                        <uri>http://protist.i.hosei.ac.jp/PDB/PCD0473/C/016.jpg</uri>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">33634</id>
+                    <scientific_name>Stramenopiles</scientific_name>
+                    <authority>Patterson 1989, emend. Adl et al. 2005</authority>
+                    <synonym>Chromophyta</synonym>
+                    <synonym>heterokonts</synonym>
+                    <synonym>Heterokontophyta</synonym>
+                  </taxonomy>
+                  <clade>
+                    <name>Labyrinthulomycetes &amp; Ochrophyta &amp; Oomycetes</name>
+                    <clade>
+                      <name>Ochrophyta &amp; Oomycetes</name>
+                      <reference doi="10.1016/j.protis.2008.11.004">
+                        <desc>Seven Gene Phylogeny of Heterokonts</desc>
+                      </reference>
+                      <reference>
+                      </reference>
+                      <clade>
+                        <taxonomy>
+                          <scientific_name>Ochrophyta</scientific_name>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">2836</id>
+                            <scientific_name>Bacillariophyta</scientific_name>
+                            <common_name>diatoms</common_name>
+                            <rank>class</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">33850</id>
+                              <scientific_name>Bacillariophycidae</scientific_name>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">186039</id>
+                                <code>FCYXX</code>
+                                <scientific_name>Fragilariopsis cylindrus</scientific_name>
+                                <authority>Krieger</authority>
+                                <synonym>Nitzschia cylindrus</synonym>
+                                <rank>species</rank>
+                                <uri>http://www.awi.de/fileadmin/user_upload/News/Press_Releases/2012/1._Quartal/000_Fragilariposis_Chloroplasten_GDieckmann_w.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">2850</id>
+                                <code>PHATR</code>
+                                <scientific_name>Phaeodactylum tricornutum</scientific_name>
+                                <authority>Bohlin</authority>
+                                <rank>species</rank>
+                                <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/b/bf/Phaeodactylum_tricornutum.png/637px-Phaeodactylum_tricornutum.png</uri>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">35127</id>
+                              <scientific_name>Thalassiosira</scientific_name>
+                              <rank>genus</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">35128</id>
+                                <code>THAPS</code>
+                                <scientific_name>Thalassiosira pseudonana</scientific_name>
+                                <authority>Hasle &amp; Heimdal</authority>
+                                <common_name>Marine diatom</common_name>
+                                <synonym>Cyclotella nana</synonym>
+                                <rank>species</rank>
+                                <uri>http://www.genomenewsnetwork.org/gnn_images/sequenced_genomes/thalassiosira_pseudonana.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">159749</id>
+                                <code>THAOC</code>
+                                <scientific_name>Thalassiosira oceanica</scientific_name>
+                                <common_name>Marine diatom</common_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <name>Pelagophyceae &amp; Phaeophyceae</name>
+                          <reference doi="10.1128/AEM.06952-11">
+                            <desc>Distribution patterns and phylogeny of marine stramenopiles in the north pacific ocean</desc>
+                          </reference>
+                          <reference>
+                          </reference>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">44056</id>
+                              <code>AURAN</code>
+                              <scientific_name>Aureococcus anophagefferens</scientific_name>
+                              <authority>Hargraves &amp; Sieburth</authority>
+                              <common_name>Harmful bloom alga</common_name>
+                              <rank>species</rank>
+                              <uri>http://www.dec.ny.gov/images/fish_marine_images/alex1.jpg</uri>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">2880</id>
+                              <code>ECTSI</code>
+                              <scientific_name>Ectocarpus siliculosus</scientific_name>
+                              <common_name>Brown alga</common_name>
+                              <rank>species</rank>
+                              <uri>http://www.research.kobe-u.ac.jp/rcis-ku-macc/j.p.folder/photo/KU-1110%20Ectocarpus%20siliculosus%20b%20x20.jpg</uri>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">4762</id>
+                          <scientific_name>Oomycetes</scientific_name>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">4776</id>
+                            <scientific_name>Peronosporales</scientific_name>
+                            <rank>order</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">4783</id>
+                              <scientific_name>Phytophthora</scientific_name>
+                              <rank>genus</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">4787</id>
+                                <code>PHYIN</code>
+                                <scientific_name>Phytophthora infestans</scientific_name>
+                                <authority>(Mont.) de Bary 1876</authority>
+                                <common_name>Potato late blight fungus</common_name>
+                                <rank>species</rank>
+                                <uri>http://bioweb.uwlax.edu/bio203/s2007/benrud_jaco/index_files/image4901.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">164328</id>
+                                <code>PHYRM</code>
+                                <scientific_name>Phytophthora ramorum</scientific_name>
+                                <common_name>Sudden oak death agent</common_name>
+                                <rank>species</rank>
+                                <uri>http://genome.jgi-psf.org/Phyra1_1/pramorum.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">67593</id>
+                                <code>PHYSO</code>
+                                <scientific_name>Phytophthora sojae</scientific_name>
+                                <common_name>Soybean stem and root rot agent</common_name>
+                                <synonym>Phytophthora megasperma f. sp. glycines</synonym>
+                                <rank>species</rank>
+                                <uri>http://www.apsnet.org/publications/imageresources/PublishingImages/2003/IW000025b.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">4785</id>
+                                <code>PHYCI</code>
+                                <scientific_name>Phytophthora cinnamomi</scientific_name>
+                                <common_name>Cinnamon fungus</common_name>
+                                <rank>species</rank>
+                                <uri>http://genome.jgi.doe.gov/public/Phyci1/Pcinnamomi_hyphae_and_chlamydospores.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">4784</id>
+                                <code>PHYCP</code>
+                                <scientific_name>Phytophthora capsici</scientific_name>
+                                <rank>species</rank>
+                                <uri>http://upload.wikimedia.org/wikipedia/commons/2/24/Phytophthora_capsici_sporangia.jpg</uri>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">559515</id>
+                              <code>HYAAE</code>
+                              <scientific_name>Hyaloperonospora arabidopsidis (strain Emoy2)</scientific_name>
+                              <common_name>Downy mildew agent</common_name>
+                              <synonym>Peronospora arabidopsidis</synonym>
+                              <uri>http://www.nature.com/nature/journal/v470/n7332/images/470044a-f1.2.jpg</uri>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">65071</id>
+                            <code>PYTUL</code>
+                            <scientific_name>Pythium ultimum</scientific_name>
+                            <rank>species</rank>
+                            <uri>http://www.plantpath.cornell.edu/labs/enelson/images/Germ_Sporangia(small).jpg</uri>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">33674</id>
+                        <scientific_name>Thraustochytriaceae</scientific_name>
+                        <synonym>Thraustochytriales</synonym>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">702273</id>
+                          <code>AKEXX</code>
+                          <scientific_name>Aplanochytrium kerguelense PBS07</scientific_name>
+                          <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/9/91/Aplanolm.jpg/120px-Aplanolm.jpg</uri>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">876976</id>
+                          <code>SAGXX</code>
+                          <scientific_name>Schizochytrium aggregatum ATCC 28209</scientific_name>
+                          <uri>http://genome.jgi-psf.org/public/Schag1/120124-ATCC28209-22.JPG</uri>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">87102</id>
+                          <code>ALIXX</code>
+                          <scientific_name>Aurantiochytrium limacinum</scientific_name>
+                          <synonym>Schizochytrium limacinum</synonym>
+                          <rank>species</rank>
+                          <uri>http://upload.wikimedia.org/wikipedia/commons/3/38/Aurantiochytrium_limacinum_SR21.jpg</uri>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">12968</id>
+                      <code>BLAHO</code>
+                      <scientific_name>Blastocystis hominis</scientific_name>
+                      <rank>species</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">543769</id>
+                  <scientific_name>Rhizaria</scientific_name>
+                </taxonomy>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">71427</id>
+                    <scientific_name>Allogromia laticollaris</scientific_name>
+                    <rank>species</rank>
+                    <uri>http://forambarcoding.unige.ch/system/pictures/424/s600/A.laticollaris1.jpg</uri>
+                  </taxonomy>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">227086</id>
+                    <code>BIGNA</code>
+                    <scientific_name>Bigelowiella natans</scientific_name>
+                    <common_name>Pedinomonas minutissima</common_name>
+                    <synonym>Chlorarachnion sp. (strain CCMP621)</synonym>
+                    <synonym>Pedinomonas minutissima</synonym>
+                    <rank>species</rank>
+                    <uri>http://genome.jgi.doe.gov/Bigna1/Bigna1.jpg</uri>
+                  </taxonomy>
+                </clade>
+              </clade>
+            </clade>
+          </clade>
+          <clade>
+            <name>Excavata</name>
+            <reference doi="10.1038/nature04546">
+            </reference>
+            <clade>
+              <name>Kinetoplastida &amp; Heterolobosea</name>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">5653</id>
+                  <scientific_name>Kinetoplastida</scientific_name>
+                  <common_name>kinetoplasts</common_name>
+                  <rank>order</rank>
+                </taxonomy>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">5654</id>
+                    <scientific_name>Trypanosomatidae</scientific_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">5690</id>
+                      <scientific_name>Trypanosoma</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">999953</id>
+                        <code>TRYB2</code>
+                        <scientific_name>Trypanosoma brucei brucei (strain 927/4 GUTat10.1)</scientific_name>
+                        <rank>strain</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">5693</id>
+                        <code>TRYCR</code>
+                        <scientific_name>Trypanosoma cruzi</scientific_name>
+                        <rank>species</rank>
+                        <uri>http://upload.wikimedia.org/wikipedia/commons/thumb/0/0b/Trypanosoma_cruzi_crithidia.jpeg/220px-Trypanosoma_cruzi_crithidia.jpeg</uri>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">5658</id>
+                      <scientific_name>Leishmania</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">5664</id>
+                        <code>LEIMA</code>
+                        <scientific_name>Leishmania major</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">5671</id>
+                        <code>LEIIN</code>
+                        <scientific_name>Leishmania infantum</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">5660</id>
+                        <code>LEIBR</code>
+                        <scientific_name>Leishmania braziliensis</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">75058</id>
+                    <code>BODSA</code>
+                    <scientific_name>Bodo saltans</scientific_name>
+                    <common_name>Flagellated protozoan</common_name>
+                    <rank>species</rank>
+                    <uri>http://protist.i.hosei.ac.jp/pdb/images/Mastigophora/Bodo/sp_1f.jpg</uri>
+                  </taxonomy>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">5762</id>
+                  <code>NAEGR</code>
+                  <scientific_name>Naegleria gruberi</scientific_name>
+                  <common_name>Amoeba</common_name>
+                  <rank>species</rank>
+                  <uri>http://media.npr.org/assets/news/2010/03/05/amoeba_custom-a24a7e20b8d9f1b681cf6a25d0d046d84f238349-s3.jpg</uri>
+                </taxonomy>
+              </clade>
+            </clade>
+            <clade>
+              <name>Metamonada</name>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">184922</id>
+                  <code>GIAIC</code>
+                  <scientific_name>Giardia intestinalis (strain ATCC 50803 / WB clone C6)</scientific_name>
+                  <synonym>Giardia intestinalis (strain ATCC 50803 / WB clone C6)</synonym>
+                  <synonym>Giardia lamblia</synonym>
+                  <rank>species</rank>
+                </taxonomy>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">5722</id>
+                  <code>TRIVA</code>
+                  <scientific_name>Trichomonas vaginalis</scientific_name>
+                  <rank>species</rank>
+                </taxonomy>
+              </clade>
+            </clade>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="uniprot">554296</id>
+              <scientific_name>Apusozoa</scientific_name>
+            </taxonomy>
+            <reference doi="10.1016/j.protis.2008.06.002">
+              <desc>Planomonadida ord. nov. (Apusozoa): Ultrastructural Affinity with Micronuclearia podoventralis and Deep Divergences within Planomonas gen. nov</desc>
+            </reference>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">554453</id>
+                <scientific_name>Planomonas micra</scientific_name>
+                <authority>(Cavalier-Smith, 2008) Heiss, Walker &amp; Simpson 2010</authority>
+                <synonym>Apusomonadidae sp. micra</synonym>
+                <rank>species</rank>
+              </taxonomy>
+            </clade>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">529818</id>
+                <code>TTRXX</code>
+                <scientific_name>Thecamonas trahens</scientific_name>
+                <authority>Larsen &amp; Patterson 1990</authority>
+                <synonym>Amastigomonas trahens</synonym>
+                <rank>species</rank>
+                <uri>http://bioinformatica.upf.edu/2011/projectes11/Cx/images/pro_t_tra.jpg</uri>
+              </taxonomy>
+            </clade>
+          </clade>
+        </clade>
+      </clade>
+      <clade>
+        <taxonomy>
+          <id provider="uniprot">2157</id>
+          <scientific_name>Archaea</scientific_name>
+          <rank>superkingdom</rank>
+        </taxonomy>
+        <clade>
+          <name>a_62</name>
+          <clade>
+            <name>a_56</name>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">28890</id>
+                <scientific_name>Euryarchaeota</scientific_name>
+                <rank>phylum</rank>
+              </taxonomy>
+              <clade>
+                <name>a_44</name>
+                <clade>
+                  <name>a_28</name>
+                  <clade>
+                    <name>a_26</name>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">224756</id>
+                        <scientific_name>Methanomicrobia</scientific_name>
+                        <rank>class</rank>
+                      </taxonomy>
+                      <clade>
+                        <name>a_14</name>
+                        <clade>
+                          <name>a_12</name>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">2206</id>
+                              <scientific_name>Methanosarcinaceae</scientific_name>
+                              <rank>family</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">2207</id>
+                                <scientific_name>Methanosarcina</scientific_name>
+                                <rank>genus</rank>
+                              </taxonomy>
+                              <clade>
+                                <name>a_2</name>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">2214</id>
+                                    <code>METAC</code>
+                                    <scientific_name>Methanosarcina acetivorans</scientific_name>
+                                    <rank>species</rank>
+                                  </taxonomy>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">269797</id>
+                                    <code>METBF</code>
+                                    <scientific_name>Methanosarcina barkeri (strain Fusaro / DSM 804)</scientific_name>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">2209</id>
+                                  <code>METMA</code>
+                                  <scientific_name>Methanosarcina mazei</scientific_name>
+                                  <synonym>Methanosarcina frisia</synonym>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">259564</id>
+                                <code>METBU</code>
+                                <scientific_name>Methanococcoides burtonii (strain DSM 6242)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <name>a_11</name>
+                            <taxonomy>
+                              <id provider="uniprot">2191</id>
+                              <scientific_name>Methanomicrobiales</scientific_name>
+                              <rank>order</rank>
+                            </taxonomy>
+                            <clade>
+                              <name>a_9</name>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">456442</id>
+                                  <code>METB6</code>
+                                  <scientific_name>Methanoregula boonei (strain 6A8)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">2203</id>
+                                  <code>METHU</code>
+                                  <scientific_name>Methanospirillum hungatei</scientific_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">368407</id>
+                                <code>METMJ</code>
+                                <scientific_name>Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">410358</id>
+                            <code>METLZ</code>
+                            <scientific_name>Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">349307</id>
+                          <code>METTP</code>
+                          <scientific_name>Methanosaeta thermophila (strain DSM 6194 / PT)</scientific_name>
+                          <synonym>Methanothrix thermophila (strain DSM 6194 / PT)</synonym>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">2236</id>
+                        <scientific_name>Halobacteriaceae</scientific_name>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <name>a_23</name>
+                        <clade>
+                          <name>a_19</name>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">2238</id>
+                              <code>HALMA</code>
+                              <scientific_name>Haloarcula marismortui</scientific_name>
+                              <synonym>Halobacterium marismortui</synonym>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">2257</id>
+                              <code>NATPH</code>
+                              <scientific_name>Natronomonas pharaonis</scientific_name>
+                              <common_name>Natronobacterium pharaonis</common_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <name>a_22</name>
+                          <taxonomy>
+                            <id provider="uniprot">2239</id>
+                            <scientific_name>Halobacterium</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">478009</id>
+                              <code>HALS3</code>
+                              <scientific_name>Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)</scientific_name>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">2243</id>
+                              <code>HALSP</code>
+                              <scientific_name>Halobacterium sp.</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">362976</id>
+                          <code>HALWD</code>
+                          <scientific_name>Haloquadratum walsbyi (strain DSM 16790)</scientific_name>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">224325</id>
+                      <code>ARCFU</code>
+                      <scientific_name>Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)</scientific_name>
+                      <rank>strain</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <name>a_43</name>
+                  <clade>
+                    <name>a_41</name>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">2182</id>
+                        <scientific_name>Methanococcales</scientific_name>
+                        <rank>order</rank>
+                      </taxonomy>
+                      <clade>
+                        <name>a_31</name>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">2190</id>
+                            <code>METJA</code>
+                            <scientific_name>Methanocaldococcus jannaschii</scientific_name>
+                            <synonym>Methanococcus jannaschii</synonym>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">419665</id>
+                            <code>META3</code>
+                            <scientific_name>Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <name>a_34</name>
+                        <taxonomy>
+                          <id provider="uniprot">2184</id>
+                          <scientific_name>Methanococcus</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">39152</id>
+                            <code>METMP</code>
+                            <scientific_name>Methanococcus maripaludis</scientific_name>
+                            <synonym>Methanococcus deltae</synonym>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">406327</id>
+                            <code>METVS</code>
+                            <scientific_name>Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <name>a_40</name>
+                      <taxonomy>
+                        <id provider="uniprot">2159</id>
+                        <scientific_name>Methanobacteriaceae</scientific_name>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <name>a_38</name>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">420247</id>
+                            <code>METS3</code>
+                            <scientific_name>Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">339860</id>
+                            <code>METST</code>
+                            <scientific_name>Methanosphaera stadtmanae (strain DSM 3091)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">187420</id>
+                          <code>METTH</code>
+                          <scientific_name>Methanobacterium thermoautotrophicum</scientific_name>
+                          <synonym>Methanobacterium thermoautotrophicum</synonym>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">2320</id>
+                      <code>METKA</code>
+                      <scientific_name>Methanopyrus kandleri</scientific_name>
+                      <rank>species</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">2259</id>
+                  <scientific_name>Thermococcaceae</scientific_name>
+                  <rank>family</rank>
+                </taxonomy>
+                <clade>
+                  <name>PYRFU &amp; THEKO &amp; PYRAB &amp; PYRHO</name>
+                  <clade>
+                    <name>PYRFU &amp; THEKO</name>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">2261</id>
+                        <code>PYRFU</code>
+                        <scientific_name>Pyrococcus furiosus</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">69014</id>
+                        <code>THEKO</code>
+                        <scientific_name>Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)</scientific_name>
+                        <synonym>Pyrococcus kodakaraensis (strain KOD1)</synonym>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">2260</id>
+                      <scientific_name>Pyrococcus</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">29292</id>
+                        <code>PYRAB</code>
+                        <scientific_name>Pyrococcus abyssi</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">53953</id>
+                        <code>PYRHO</code>
+                        <scientific_name>Pyrococcus horikoshii</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">523850</id>
+                    <code>THEON</code>
+                    <scientific_name>Thermococcus onnurineus (strain NA1)</scientific_name>
+                  </taxonomy>
+                </clade>
+              </clade>
+            </clade>
+            <clade>
+              <name>a_55</name>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">228908</id>
+                  <code>NANEQ</code>
+                  <scientific_name>Nanoarchaeum equitans (strain Kin4-M)</scientific_name>
+                </taxonomy>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">436308</id>
+                  <code>NITMS</code>
+                  <scientific_name>Nitrosopumilus maritimus (strain SCM1)</scientific_name>
+                </taxonomy>
+              </clade>
+            </clade>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="uniprot">2301</id>
+              <scientific_name>Thermoplasmatales</scientific_name>
+              <rank>order</rank>
+            </taxonomy>
+            <clade>
+              <name>a_59</name>
+              <taxonomy>
+                <id provider="uniprot">2302</id>
+                <scientific_name>Thermoplasma</scientific_name>
+                <rank>genus</rank>
+              </taxonomy>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">273075</id>
+                  <code>THEAC</code>
+                  <scientific_name>Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)</scientific_name>
+                </taxonomy>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">273116</id>
+                  <code>THEVO</code>
+                  <scientific_name>Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / IFO 15438 / JCM 9571 / GSS1)</scientific_name>
+                </taxonomy>
+              </clade>
+            </clade>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">263820</id>
+                <code>PICTO</code>
+                <scientific_name>Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)</scientific_name>
+              </taxonomy>
+            </clade>
+          </clade>
+        </clade>
+        <clade>
+          <name>a_93</name>
+          <clade>
+            <taxonomy>
+              <id provider="uniprot">183924</id>
+              <scientific_name>Thermoprotei</scientific_name>
+              <rank>class</rank>
+            </taxonomy>
+            <clade>
+              <name>a_83</name>
+              <clade>
+                <name>a_81</name>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">2267</id>
+                    <scientific_name>Thermoproteaceae</scientific_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                  <clade>
+                    <name>a_71</name>
+                    <clade>
+                      <name>a_67</name>
+                      <taxonomy>
+                        <id provider="uniprot">2276</id>
+                        <scientific_name>Pyrobaculum</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                      <clade>
+                        <name>a_65</name>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">340102</id>
+                            <code>PYRAR</code>
+                            <scientific_name>Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">410359</id>
+                            <code>PYRCJ</code>
+                            <scientific_name>Pyrobaculum calidifontis (strain JCM 11548 / VA1)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">13773</id>
+                          <code>PYRAE</code>
+                          <scientific_name>Pyrobaculum aerophilum</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <name>a_70</name>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">384616</id>
+                          <code>PYRIL</code>
+                          <scientific_name>Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)</scientific_name>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">444157</id>
+                          <code>THENV</code>
+                          <scientific_name>Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta)</scientific_name>
+                          <synonym>Thermoproteus neutrophilus</synonym>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">397948</id>
+                      <code>CALMQ</code>
+                      <scientific_name>Caldivirga maquilingensis (strain ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167)</scientific_name>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <name>a_80</name>
+                  <taxonomy>
+                    <id provider="uniprot">118883</id>
+                    <scientific_name>Sulfolobaceae</scientific_name>
+                    <rank>family</rank>
+                  </taxonomy>
+                  <clade>
+                    <name>a_78</name>
+                    <taxonomy>
+                      <id provider="uniprot">2284</id>
+                      <scientific_name>Sulfolobus</scientific_name>
+                      <rank>genus</rank>
+                    </taxonomy>
+                    <clade>
+                      <name>a_76</name>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">2285</id>
+                          <code>SULAC</code>
+                          <scientific_name>Sulfolobus acidocaldarius</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">273063</id>
+                          <code>SULTO</code>
+                          <scientific_name>Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)</scientific_name>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">2287</id>
+                        <code>SULSO</code>
+                        <scientific_name>Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)</scientific_name>
+                        <synonym>Sulfolobus solfataricus P2</synonym>
+                        <rank>strain</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">399549</id>
+                      <code>METS5</code>
+                      <scientific_name>Metallosphaera sedula (strain ATCC 51363 / DSM 5348)</scientific_name>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">56636</id>
+                  <code>AERPE</code>
+                  <scientific_name>Aeropyrum pernix</scientific_name>
+                  <rank>species</rank>
+                </taxonomy>
+              </clade>
+            </clade>
+            <clade>
+              <name>a_90</name>
+              <clade>
+                <name>a_88</name>
+                <clade>
+                  <name>a_86</name>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">399550</id>
+                      <code>STAMF</code>
+                      <scientific_name>Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1)</scientific_name>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">368408</id>
+                      <code>THEPD</code>
+                      <scientific_name>Thermofilum pendens (strain Hrk 5)</scientific_name>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">415426</id>
+                    <code>HYPBU</code>
+                    <scientific_name>Hyperthermus butylicus (strain DSM 5456 / JCM 9403)</scientific_name>
+                  </taxonomy>
+                </clade>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">453591</id>
+                  <code>IGNH4</code>
+                  <scientific_name>Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)</scientific_name>
+                </taxonomy>
+              </clade>
+            </clade>
+          </clade>
+          <clade>
+            <taxonomy>
+              <id provider="uniprot">374847</id>
+              <code>KORCO</code>
+              <scientific_name>Korarchaeum cryptofilum (strain OPF8)</scientific_name>
+            </taxonomy>
+          </clade>
+        </clade>
+      </clade>
+    </clade>
+    <clade>
+      <taxonomy>
+        <id provider="uniprot">2</id>
+        <scientific_name>Bacteria</scientific_name>
+        <rank>superkingdom</rank>
+      </taxonomy>
+      <clade>
+        <name>b_278</name>
+        <clade>
+          <name>b_268</name>
+          <clade>
+            <name>b_226</name>
+            <clade>
+              <name>b_200</name>
+              <clade>
+                <name>b_194</name>
+                <clade>
+                  <name>b_104</name>
+                  <clade>
+                    <name>b_80</name>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">1224</id>
+                        <scientific_name>Proteobacteria</scientific_name>
+                        <rank>phylum</rank>
+                      </taxonomy>
+                      <clade>
+                        <name>b_52</name>
+                        <clade>
+                          <name>b_44</name>
+                          <clade>
+                            <name>b_30</name>
+                            <clade>
+                              <name>b_24</name>
+                              <taxonomy>
+                                <id provider="uniprot">1236</id>
+                                <scientific_name>Gammaproteobacteria</scientific_name>
+                                <rank>class</rank>
+                              </taxonomy>
+                              <clade>
+                                <name>b_16</name>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">543</id>
+                                    <scientific_name>Enterobacteriaceae</scientific_name>
+                                    <rank>family</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <name>b_8</name>
+                                    <clade>
+                                      <name>b_6</name>
+                                      <clade>
+                                        <name>b_4</name>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">561</id>
+                                            <scientific_name>Escherichia</scientific_name>
+                                            <rank>genus</rank>
+                                          </taxonomy>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">83333</id>
+                                              <code>ECOLI</code>
+                                              <scientific_name>Escherichia coli (strain K12)</scientific_name>
+                                            </taxonomy>
+                                          </clade>
+                                          <clade>
+                                            <taxonomy>
+                                              <id provider="uniprot">83334</id>
+                                              <code>ECO57</code>
+                                              <scientific_name>Escherichia coli O157:H7</scientific_name>
+                                            </taxonomy>
+                                          </clade>
+                                        </clade>
+                                        <clade>
+                                          <taxonomy>
+                                            <id provider="uniprot">623</id>
+                                            <code>SHIFL</code>
+                                            <scientific_name>Shigella flexneri</scientific_name>
+                                            <rank>species</rank>
+                                          </taxonomy>
+                                        </clade>
+                                      </clade>
+                                      <clade>
+                                        <taxonomy>
+                                          <id provider="uniprot">90371</id>
+                                          <code>SALTY</code>
+                                          <scientific_name>Salmonella typhimurium</scientific_name>
+                                        </taxonomy>
+                                      </clade>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">632</id>
+                                        <code>YERPE</code>
+                                        <scientific_name>Yersinia pestis</scientific_name>
+                                        <rank>species</rank>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">29488</id>
+                                      <code>PHOLU</code>
+                                      <scientific_name>Photorhabdus luminescens</scientific_name>
+                                      <synonym>Xenorhabdus luminescens</synonym>
+                                      <rank>species</rank>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <name>b_15</name>
+                                  <clade>
+                                    <name>b_13</name>
+                                    <taxonomy>
+                                      <id provider="uniprot">641</id>
+                                      <scientific_name>Vibrionaceae</scientific_name>
+                                      <rank>family</rank>
+                                    </taxonomy>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">74109</id>
+                                        <code>PHOPR</code>
+                                        <scientific_name>Photobacterium profundum</scientific_name>
+                                        <synonym>Photobacterium sp. (strain SS9)</synonym>
+                                        <rank>species</rank>
+                                      </taxonomy>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">666</id>
+                                        <code>VIBCH</code>
+                                        <scientific_name>Vibrio cholerae</scientific_name>
+                                        <rank>species</rank>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">318161</id>
+                                      <code>SHEDO</code>
+                                      <scientific_name>Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)</scientific_name>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <name>b_23</name>
+                                <clade>
+                                  <name>b_21</name>
+                                  <taxonomy>
+                                    <id provider="uniprot">286</id>
+                                    <scientific_name>Pseudomonas</scientific_name>
+                                    <rank>genus</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <name>b_19</name>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">220664</id>
+                                        <code>PSEF5</code>
+                                        <scientific_name>Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)</scientific_name>
+                                      </taxonomy>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">205922</id>
+                                        <code>PSEPF</code>
+                                        <scientific_name>Pseudomonas fluorescens (strain Pf0-1)</scientific_name>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">287</id>
+                                      <code>PSEAE</code>
+                                      <scientific_name>Pseudomonas aeruginosa</scientific_name>
+                                      <rank>species</rank>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">290398</id>
+                                    <code>CHRSD</code>
+                                    <scientific_name>Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)</scientific_name>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <name>b_29</name>
+                              <taxonomy>
+                                <id provider="uniprot">28216</id>
+                                <scientific_name>Betaproteobacteria</scientific_name>
+                                <rank>class</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">159087</id>
+                                  <code>DECAR</code>
+                                  <scientific_name>Dechloromonas aromatica (strain RCB)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">266264</id>
+                                  <code>RALME</code>
+                                  <scientific_name>Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <name>b_43</name>
+                            <clade>
+                              <name>b_41</name>
+                              <clade>
+                                <name>b_35</name>
+                                <taxonomy>
+                                  <id provider="uniprot">28216</id>
+                                  <scientific_name>Betaproteobacteria</scientific_name>
+                                  <rank>class</rank>
+                                </taxonomy>
+                                <clade>
+                                  <name>b_33</name>
+                                  <taxonomy>
+                                    <id provider="uniprot">206379</id>
+                                    <scientific_name>Nitrosomonadaceae</scientific_name>
+                                    <rank>family</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">915</id>
+                                      <code>NITEU</code>
+                                      <scientific_name>Nitrosomonas europaea</scientific_name>
+                                      <rank>species</rank>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">323848</id>
+                                      <code>NITMU</code>
+                                      <scientific_name>Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849)</scientific_name>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">36861</id>
+                                    <code>THIDE</code>
+                                    <scientific_name>Thiobacillus denitrificans</scientific_name>
+                                    <rank>species</rank>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <name>b_40</name>
+                                <taxonomy>
+                                  <id provider="uniprot">135613</id>
+                                  <scientific_name>Chromatiales</scientific_name>
+                                  <rank>order</rank>
+                                </taxonomy>
+                                <clade>
+                                  <name>b_38</name>
+                                  <taxonomy>
+                                    <id provider="uniprot">72276</id>
+                                    <scientific_name>Ectothiorhodospiraceae</scientific_name>
+                                    <common_name>purple sulfur bacteria</common_name>
+                                    <rank>family</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">187272</id>
+                                      <code>ALHEH</code>
+                                      <scientific_name>Alkalilimnicola ehrlichei (strain MLHE-1)</scientific_name>
+                                    </taxonomy>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">349124</id>
+                                      <code>HALHL</code>
+                                      <scientific_name>Halorhodospira halophila (strain DSM 244 / SL1)</scientific_name>
+                                      <synonym>Ectothiorhodospira halophila (strain DSM 244 / SL1)</synonym>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">323261</id>
+                                    <code>NITOC</code>
+                                    <scientific_name>Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)</scientific_name>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">317025</id>
+                                <code>THICR</code>
+                                <scientific_name>Thiomicrospira crunogena (strain XCL-2)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <name>b_51</name>
+                          <taxonomy>
+                            <id provider="uniprot">1236</id>
+                            <scientific_name>Gammaproteobacteria</scientific_name>
+                            <rank>class</rank>
+                          </taxonomy>
+                          <clade>
+                            <name>b_47</name>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">135577</id>
+                                <code>IDILO</code>
+                                <scientific_name>Idiomarina loihiensis</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">446</id>
+                                <code>LEGPN</code>
+                                <scientific_name>Legionella pneumophila</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <name>b_50</name>
+                            <taxonomy>
+                              <id provider="uniprot">32033</id>
+                              <scientific_name>Xanthomonadaceae</scientific_name>
+                              <rank>family</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">190486</id>
+                                <code>XANAC</code>
+                                <scientific_name>Xanthomonas axonopodis pv. citri (strain 306)</scientific_name>
+                                <synonym>Xanthomonas citri pv. citri str. 306</synonym>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">183190</id>
+                                <code>XYLFT</code>
+                                <scientific_name>Xylella fastidiosa (strain Temecula1 / ATCC 700964)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <name>b_71</name>
+                        <taxonomy>
+                          <id provider="uniprot">28211</id>
+                          <scientific_name>Alphaproteobacteria</scientific_name>
+                          <rank>class</rank>
+                        </taxonomy>
+                        <clade>
+                          <name>b_67</name>
+                          <clade>
+                            <name>b_65</name>
+                            <clade>
+                              <name>b_61</name>
+                              <taxonomy>
+                                <id provider="uniprot">356</id>
+                                <scientific_name>Rhizobiales</scientific_name>
+                                <rank>order</rank>
+                              </taxonomy>
+                              <clade>
+                                <name>b_57</name>
+                                <taxonomy>
+                                  <id provider="uniprot">227290</id>
+                                  <scientific_name>Rhizobium/Agrobacterium group</scientific_name>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">176299</id>
+                                    <code>AGRT5</code>
+                                    <scientific_name>Agrobacterium tumefaciens (strain C58 / ATCC 33970)</scientific_name>
+                                  </taxonomy>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">347834</id>
+                                    <code>RHIEC</code>
+                                    <scientific_name>Rhizobium etli (strain CFN 42 / ATCC 51251)</scientific_name>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <name>b_60</name>
+                                <taxonomy>
+                                  <id provider="uniprot">41294</id>
+                                  <scientific_name>Bradyrhizobiaceae</scientific_name>
+                                  <rank>family</rank>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">375</id>
+                                    <code>BRAJA</code>
+                                    <scientific_name>Bradyrhizobium japonicum</scientific_name>
+                                    <rank>species</rank>
+                                  </taxonomy>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">395960</id>
+                                    <code>RHOPT</code>
+                                    <scientific_name>Rhodopseudomonas palustris (strain TIE-1)</scientific_name>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <name>b_64</name>
+                              <taxonomy>
+                                <id provider="uniprot">31989</id>
+                                <scientific_name>Rhodobacteraceae</scientific_name>
+                                <rank>family</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">349101</id>
+                                  <code>RHOS1</code>
+                                  <scientific_name>Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">375451</id>
+                                  <code>ROSDO</code>
+                                  <scientific_name>Roseobacter denitrificans (strain ATCC 33942 / OCh 114)</scientific_name>
+                                  <common_name>Erythrobacter sp. (strain OCh 114)</common_name>
+                                  <synonym>Roseobacter denitrificans</synonym>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">155892</id>
+                              <code>CAUCR</code>
+                              <scientific_name>Caulobacter crescentus</scientific_name>
+                              <synonym>Caulobacter vibrioides</synonym>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <name>b_70</name>
+                          <taxonomy>
+                            <id provider="uniprot">204441</id>
+                            <scientific_name>Rhodospirillales</scientific_name>
+                            <rank>order</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">524</id>
+                              <code>ACICY</code>
+                              <scientific_name>Acidiphilium cryptum</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">1085</id>
+                              <code>RHORU</code>
+                              <scientific_name>Rhodospirillum rubrum</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <name>b_79</name>
+                      <clade>
+                        <name>b_77</name>
+                        <taxonomy>
+                          <id provider="uniprot">1224</id>
+                          <scientific_name>Proteobacteria</scientific_name>
+                          <rank>phylum</rank>
+                        </taxonomy>
+                        <clade>
+                          <name>b_75</name>
+                          <taxonomy>
+                            <id provider="uniprot">712</id>
+                            <scientific_name>Pasteurellaceae</scientific_name>
+                            <rank>family</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">727</id>
+                              <code>HAEIN</code>
+                              <scientific_name>Haemophilus influenzae</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">747</id>
+                              <code>PASMU</code>
+                              <scientific_name>Pasteurella multocida</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">487</id>
+                            <code>NEIME</code>
+                            <scientific_name>Neisseria meningitidis</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">905</id>
+                          <code>ACIFE</code>
+                          <scientific_name>Acidaminococcus fermentans</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <name>b_103</name>
+                    <clade>
+                      <name>b_91</name>
+                      <taxonomy>
+                        <id provider="uniprot">28221</id>
+                        <scientific_name>Deltaproteobacteria</scientific_name>
+                        <rank>class</rank>
+                      </taxonomy>
+                      <clade>
+                        <name>b_87</name>
+                        <clade>
+                          <name>b_83</name>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">84980</id>
+                              <code>DESPS</code>
+                              <scientific_name>Desulfotalea psychrophila</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">876</id>
+                              <code>DESDE</code>
+                              <scientific_name>Desulfovibrio desulfuricans</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">56780</id>
+                            <code>SYNAS</code>
+                            <scientific_name>Syntrophus aciditrophicus (strain SB)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <name>b_90</name>
+                        <taxonomy>
+                          <id provider="uniprot">28231</id>
+                          <scientific_name>Geobacter</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">28232</id>
+                            <code>GEOME</code>
+                            <scientific_name>Geobacter metallireducens</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">35554</id>
+                            <code>GEOSL</code>
+                            <scientific_name>Geobacter sulfurreducens</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <name>b_102</name>
+                      <clade>
+                        <name>b_98</name>
+                        <clade>
+                          <name>b_94</name>
+                          <taxonomy>
+                            <id provider="uniprot">31</id>
+                            <scientific_name>Myxococcaceae</scientific_name>
+                            <rank>family</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">290397</id>
+                              <code>ANADE</code>
+                              <scientific_name>Anaeromyxobacter dehalogenans (strain 2CP-C)</scientific_name>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">34</id>
+                              <code>MYXXA</code>
+                              <scientific_name>Myxococcus xanthus</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <name>b_97</name>
+                          <taxonomy>
+                            <id provider="uniprot">57723</id>
+                            <scientific_name>Acidobacteria</scientific_name>
+                            <rank>phylum</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">204669</id>
+                              <code>KORVE</code>
+                              <scientific_name>Koribacter versatilis (strain Ellin345)</scientific_name>
+                              <synonym>Acidobacteria bacterium Ellin345</synonym>
+                              <synonym>Candidatus Koribacter versatilis Ellin345</synonym>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">332163</id>
+                              <code>SOLUS</code>
+                              <scientific_name>Solibacter usitatus</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">265606</id>
+                          <code>RHOBA</code>
+                          <scientific_name>Rhodopirellula baltica</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                </clade>
+                <clade>
+                  <name>b_193</name>
+                  <clade>
+                    <name>b_163</name>
+                    <clade>
+                      <name>b_133</name>
+                      <clade>
+                        <name>Chloroflexi &amp; Actinobacteria</name>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">201174</id>
+                            <scientific_name>Actinobacteria</scientific_name>
+                            <rank>phylum</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">2037</id>
+                              <scientific_name>Actinomycetales</scientific_name>
+                              <rank>order</rank>
+                            </taxonomy>
+                            <clade>
+                              <name>b_115</name>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">266940</id>
+                                  <code>KINRD</code>
+                                  <scientific_name>Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">378753</id>
+                                  <code>KOCRD</code>
+                                  <scientific_name>Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">1032480</id>
+                                  <code>MICPN</code>
+                                  <scientific_name>Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1)</scientific_name>
+                                  <common_name>Microlunatus phosphovorus NM-1</common_name>
+                                  <rank>strain</rank>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">1902</id>
+                                  <code>STRCO</code>
+                                  <scientific_name>Streptomyces coelicolor</scientific_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">269800</id>
+                                  <code>THEFY</code>
+                                  <scientific_name>Thermobifida fusca (strain YX)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">85007</id>
+                                <scientific_name>Corynebacterineae</scientific_name>
+                                <rank>suborder</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">1763</id>
+                                  <scientific_name>Mycobacterium</scientific_name>
+                                  <rank>genus</rank>
+                                </taxonomy>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">1769</id>
+                                    <code>MYCLE</code>
+                                    <scientific_name>Mycobacterium leprae</scientific_name>
+                                    <rank>species</rank>
+                                  </taxonomy>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">1773</id>
+                                    <code>MYCTU</code>
+                                    <scientific_name>Mycobacterium tuberculosis</scientific_name>
+                                    <rank>species</rank>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">306537</id>
+                                  <code>CORJK</code>
+                                  <scientific_name>Corynebacterium jeikeium (strain K411)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">632772</id>
+                                  <code>RHOOB</code>
+                                  <scientific_name>Rhodococcus opacus (strain B4)</scientific_name>
+                                  <rank>strain</rank>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">266117</id>
+                              <code>RUBXD</code>
+                              <scientific_name>Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)</scientific_name>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">200795</id>
+                            <scientific_name>Chloroflexi</scientific_name>
+                            <common_name>GNS bacteria</common_name>
+                            <synonym>Thermomicrobia</synonym>
+                            <rank>phylum</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">32061</id>
+                              <scientific_name>Chloroflexi (class)</scientific_name>
+                              <synonym>Chloroflecales</synonym>
+                              <synonym>Chloroflexus/Deinococcus group</synonym>
+                              <rank>class</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">1106</id>
+                                <scientific_name>Chloroflexaceae</scientific_name>
+                                <common_name>filamentous anoxygenic phototrophic bacteria</common_name>
+                                <rank>family</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">1108</id>
+                                  <code>CHLAU</code>
+                                  <scientific_name>Chloroflexus aurantiacus</scientific_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">383372</id>
+                                  <code>ROSCS</code>
+                                  <scientific_name>Roseiflexus castenholzii (strain DSM 13941 / HLO8)</scientific_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">65</id>
+                                <code>HERAU</code>
+                                <scientific_name>Herpetosiphon aurantiacus</scientific_name>
+                                <synonym>Herpetosiphon giganteus</synonym>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">479434</id>
+                              <code>SPHTD</code>
+                              <scientific_name>Sphaerobacter thermophilus (strain DSM 20745 / S 6022)</scientific_name>
+                              <rank>strain</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <name>b_132</name>
+                        <taxonomy>
+                          <id provider="uniprot">188787</id>
+                          <scientific_name>Deinococci</scientific_name>
+                          <rank>class</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">1298</id>
+                            <scientific_name>Deinococcus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">319795</id>
+                              <code>DEIGD</code>
+                              <scientific_name>Deinococcus geothermalis (strain DSM 11300)</scientific_name>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">1299</id>
+                              <code>DEIRA</code>
+                              <scientific_name>Deinococcus radiodurans</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">300852</id>
+                            <code>THET8</code>
+                            <scientific_name>Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)</scientific_name>
+                            <rank>strain</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <name>b_162</name>
+                      <taxonomy>
+                        <id provider="uniprot">1117</id>
+                        <scientific_name>Cyanobacteria</scientific_name>
+                        <rank>phylum</rank>
+                      </taxonomy>
+                      <clade>
+                        <name>b_154</name>
+                        <clade>
+                          <name>b_152</name>
+                          <clade>
+                            <name>b_146</name>
+                            <clade>
+                              <name>b_144</name>
+                              <clade>
+                                <name>b_142</name>
+                                <clade>
+                                  <name>b_138</name>
+                                  <taxonomy>
+                                    <id provider="uniprot">1162</id>
+                                    <scientific_name>Nostocaceae</scientific_name>
+                                    <rank>family</rank>
+                                  </taxonomy>
+                                  <clade>
+                                    <name>b_136</name>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">240292</id>
+                                        <code>ANAVT</code>
+                                        <scientific_name>Anabaena variabilis (strain ATCC 29413 / PCC 7937)</scientific_name>
+                                        <synonym>Anabaena flos-aquae (strain IUCC 1444)</synonym>
+                                        <rank>strain</rank>
+                                      </taxonomy>
+                                    </clade>
+                                    <clade>
+                                      <taxonomy>
+                                        <id provider="uniprot">28072</id>
+                                        <code>NOSS7</code>
+                                        <scientific_name>Nostoc sp. (strain ATCC 29411 / PCC 7524)</scientific_name>
+                                        <rank>species</rank>
+                                      </taxonomy>
+                                    </clade>
+                                  </clade>
+                                  <clade>
+                                    <taxonomy>
+                                      <id provider="uniprot">63737</id>
+                                      <code>NOSP7</code>
+                                      <scientific_name>Nostoc punctiforme (strain ATCC 29133 / PCC 73102)</scientific_name>
+                                      <rank>strain</rank>
+                                    </taxonomy>
+                                  </clade>
+                                </clade>
+                                <clade>
+                                  <taxonomy>
+                                    <id provider="uniprot">329726</id>
+                                    <code>ACAM1</code>
+                                    <scientific_name>Acaryochloris marina (strain MBIC 11017</scientific_name>
+                                    <rank>strain</rank>
+                                  </taxonomy>
+                                </clade>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">449447</id>
+                                  <code>MICAN</code>
+                                  <scientific_name>Microcystis aeruginosa (strain NIES-843)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">1206</id>
+                                <code>TRIER</code>
+                                <scientific_name>Trichodesmium erythraeum</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">1118</id>
+                              <scientific_name>Chroococcales</scientific_name>
+                              <rank>order</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">32046</id>
+                                <code>SYNEL</code>
+                                <scientific_name>Synechococcus elongatus</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">1111708</id>
+                                <code>SYNY3</code>
+                                <scientific_name>Synechocystis sp. (strain PCC 6803 / Kazusa)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">33072</id>
+                            <code>GLOVI</code>
+                            <scientific_name>Gloeobacter violaceus</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <name>b_161</name>
+                        <clade>
+                          <name>b_159</name>
+                          <taxonomy>
+                            <id provider="uniprot">1218</id>
+                            <scientific_name>Prochlorococcus</scientific_name>
+                            <rank>genus</rank>
+                          </taxonomy>
+                          <clade>
+                            <name>b_157</name>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">1219</id>
+                                <code>PROMA</code>
+                                <scientific_name>Prochlorococcus marinus</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">59919</id>
+                                <code>PROMP</code>
+                                <scientific_name>Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">74547</id>
+                              <code>PROMM</code>
+                              <scientific_name>Prochlorococcus marinus (strain MIT 9313)</scientific_name>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">64471</id>
+                            <code>SYNS3</code>
+                            <scientific_name>Synechococcus sp. (strain CC9311)</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <name>b_192</name>
+                    <clade>
+                      <name>b_190</name>
+                      <clade>
+                        <name>b_178</name>
+                        <clade>
+                          <name>b_176</name>
+                          <taxonomy>
+                            <id provider="uniprot">191412</id>
+                            <scientific_name>Chlorobiaceae</scientific_name>
+                            <rank>family</rank>
+                          </taxonomy>
+                          <clade>
+                            <name>b_170</name>
+                            <clade>
+                              <name>b_166</name>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">331678</id>
+                                  <code>CHLPB</code>
+                                  <scientific_name>Chlorobium phaeobacteroides (strain BS1)</scientific_name>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">1102</id>
+                                  <code>PROAE</code>
+                                  <scientific_name>Prosthecochloris aestuarii</scientific_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <name>b_169</name>
+                              <taxonomy>
+                                <id provider="uniprot">274493</id>
+                                <scientific_name>Chlorobium/Pelodictyon group</scientific_name>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">1100</id>
+                                  <code>PELLU</code>
+                                  <scientific_name>Pelodictyon luteolum</scientific_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">290318</id>
+                                  <code>PROVI</code>
+                                  <scientific_name>Prosthecochloris vibrioformis (strain DSM 265)</scientific_name>
+                                  <common_name>Chlorobium vibrioforme subsp. thiosulfatophilum (strain DSM 265)</common_name>
+                                  <synonym>Chlorobium phaeovibrioides (strain DSM 265)</synonym>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <name>b_175</name>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">256319</id>
+                                <scientific_name>Chlorobaculum</scientific_name>
+                                <rank>genus</rank>
+                              </taxonomy>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">517417</id>
+                                  <code>CHLP8</code>
+                                  <scientific_name>Chlorobaculum parvum (strain NCIB 8327)</scientific_name>
+                                  <synonym>Chlorobium vibrioforme subsp. thiosulfatophilum (strain DSM 263 / NCIB 8327)</synonym>
+                                </taxonomy>
+                              </clade>
+                              <clade>
+                                <taxonomy>
+                                  <id provider="uniprot">1097</id>
+                                  <code>CHLTE</code>
+                                  <scientific_name>Chlorobium tepidum</scientific_name>
+                                  <rank>species</rank>
+                                </taxonomy>
+                              </clade>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">340177</id>
+                                <code>CHLCH</code>
+                                <scientific_name>Chlorobium chlorochromatii (strain CaD3)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">315277</id>
+                            <code>CHLTA</code>
+                            <scientific_name>Chlamydia trachomatis serovar A (strain HAR-13 / ATCC VR-571B)</scientific_name>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <name>b_189</name>
+                        <taxonomy>
+                          <id provider="uniprot">976</id>
+                          <scientific_name>Bacteroidetes</scientific_name>
+                          <rank>phylum</rank>
+                        </taxonomy>
+                        <clade>
+                          <name>b_183</name>
+                          <clade>
+                            <name>b_181</name>
+                            <taxonomy>
+                              <id provider="uniprot">49546</id>
+                              <scientific_name>Flavobacteriaceae</scientific_name>
+                              <rank>family</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">986</id>
+                                <code>FLAJO</code>
+                                <scientific_name>Flavobacterium johnsoniae</scientific_name>
+                                <synonym>Cytophaga johnsonae</synonym>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">411154</id>
+                                <code>GRAFK</code>
+                                <scientific_name>Gramella forsetii (strain KT0803)</scientific_name>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">269798</id>
+                              <code>CYTH3</code>
+                              <scientific_name>Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)</scientific_name>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <name>b_188</name>
+                          <taxonomy>
+                            <id provider="uniprot">171549</id>
+                            <scientific_name>Bacteroidales</scientific_name>
+                            <rank>order</rank>
+                          </taxonomy>
+                          <clade>
+                            <name>b_186</name>
+                            <taxonomy>
+                              <id provider="uniprot">816</id>
+                              <scientific_name>Bacteroides</scientific_name>
+                              <rank>genus</rank>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">817</id>
+                                <code>BACFR</code>
+                                <scientific_name>Bacteroides fragilis</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">818</id>
+                                <code>BACTN</code>
+                                <scientific_name>Bacteroides thetaiotaomicron</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">837</id>
+                              <code>PORGI</code>
+                              <scientific_name>Porphyromonas gingivalis</scientific_name>
+                              <synonym>Bacteroides gingivalis</synonym>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">309807</id>
+                        <code>SALRD</code>
+                        <scientific_name>Salinibacter ruber (strain DSM 13855 / M31)</scientific_name>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <name>b_199</name>
+                <clade>
+                  <name>b_197</name>
+                  <taxonomy>
+                    <scientific_name>Verrucomicrobia</scientific_name>
+                  </taxonomy>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">349741</id>
+                      <code>AKKM8</code>
+                      <scientific_name>Akkermansia muciniphila (strain ATCC BAA-835)</scientific_name>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">481448</id>
+                      <code>METI4</code>
+                      <scientific_name>Methylacidiphilum infernorum (isolate V4)</scientific_name>
+                      <synonym>Methylokorus infernorum (strain V4)</synonym>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">44275</id>
+                    <code>LEPIC</code>
+                    <scientific_name>Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni</scientific_name>
+                  </taxonomy>
+                </clade>
+              </clade>
+            </clade>
+            <clade>
+              <name>b_225</name>
+              <clade>
+                <name>b_219</name>
+                <taxonomy>
+                  <id provider="uniprot">1239</id>
+                  <scientific_name>Firmicutes</scientific_name>
+                  <rank>phylum</rank>
+                </taxonomy>
+                <clade>
+                  <name>b_213</name>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">1385</id>
+                      <scientific_name>Bacillales</scientific_name>
+                      <rank>order</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">186817</id>
+                        <scientific_name>Bacillaceae</scientific_name>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">1386</id>
+                          <scientific_name>Bacillus</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">86661</id>
+                            <scientific_name>Bacillus cereus group</scientific_name>
+                          </taxonomy>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">1392</id>
+                              <code>BACAN</code>
+                              <scientific_name>Bacillus anthracis</scientific_name>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">572264</id>
+                              <code>BACC3</code>
+                              <scientific_name>Bacillus cereus (strain 03BB102)</scientific_name>
+                              <rank>strain</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">224308</id>
+                            <code>BACSU</code>
+                            <scientific_name>Bacillus subtilis (strain 168)</scientific_name>
+                            <synonym>Bacillus subtilis subsp. subtilis str. 168</synonym>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <name>b_206</name>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">86665</id>
+                            <code>BACHD</code>
+                            <scientific_name>Bacillus halodurans</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">1462</id>
+                            <code>GEOKA</code>
+                            <scientific_name>Geobacillus kaustophilus</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <name>b_210</name>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">1639</id>
+                          <code>LISMO</code>
+                          <scientific_name>Listeria monocytogenes</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">1280</id>
+                          <code>STAAU</code>
+                          <scientific_name>Staphylococcus aureus</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">195103</id>
+                      <code>CLOP1</code>
+                      <scientific_name>Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A)</scientific_name>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <name>Clostridia</name>
+                  <taxonomy>
+                    <id provider="uniprot">186801</id>
+                    <scientific_name>Clostridia</scientific_name>
+                    <rank>class</rank>
+                  </taxonomy>
+                  <clade>
+                    <name>b_218</name>
+                    <clade>
+                      <name>b_216</name>
+                      <taxonomy>
+                        <id provider="uniprot">186814</id>
+                        <scientific_name>Thermoanaerobacteriaceae</scientific_name>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">246194</id>
+                          <code>CARHZ</code>
+                          <scientific_name>Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)</scientific_name>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">119072</id>
+                          <code>THETN</code>
+                          <scientific_name>Thermoanaerobacter tengcongensis</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">49338</id>
+                        <code>DESHA</code>
+                        <scientific_name>Desulfitobacterium hafniense</scientific_name>
+                        <synonym>Desulfitobacterium frappieri</synonym>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">515619</id>
+                      <code>EUBR3</code>
+                      <scientific_name>Eubacterium rectale (strain ATCC 33656 / VPI 0990)</scientific_name>
+                    </taxonomy>
+                  </clade>
+                </clade>
+              </clade>
+              <clade>
+                <name>b_224</name>
+                <taxonomy>
+                  <id provider="uniprot">188709</id>
+                  <scientific_name>Thermotogaceae</scientific_name>
+                  <rank>family</rank>
+                </taxonomy>
+                <clade>
+                  <name>b_222</name>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">381764</id>
+                      <code>FERNB</code>
+                      <scientific_name>Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)</scientific_name>
+                    </taxonomy>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">416591</id>
+                      <code>THELT</code>
+                      <scientific_name>Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)</scientific_name>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">2336</id>
+                    <code>THEMA</code>
+                    <scientific_name>Thermotoga maritima</scientific_name>
+                    <rank>species</rank>
+                  </taxonomy>
+                </clade>
+              </clade>
+            </clade>
+          </clade>
+          <clade>
+            <name>b_267</name>
+            <clade>
+              <name>b_263</name>
+              <clade>
+                <name>b_251</name>
+                <clade>
+                  <name>b_249</name>
+                  <clade>
+                    <name>b_245</name>
+                    <clade>
+                      <name>b_237</name>
+                      <clade>
+                        <name>b_233</name>
+                        <taxonomy>
+                          <id provider="uniprot">31969</id>
+                          <scientific_name>Mollicutes</scientific_name>
+                          <rank>class</rank>
+                        </taxonomy>
+                        <clade>
+                          <name>b_231</name>
+                          <clade>
+                            <name>b_229</name>
+                            <taxonomy>
+                              <scientific_name>Mycoplasma</scientific_name>
+                            </taxonomy>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">2097</id>
+                                <code>MYCGE</code>
+                                <scientific_name>Mycoplasma genitalium</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                            <clade>
+                              <taxonomy>
+                                <id provider="uniprot">2104</id>
+                                <code>MYCPN</code>
+                                <scientific_name>Mycoplasma pneumoniae</scientific_name>
+                                <rank>species</rank>
+                              </taxonomy>
+                            </clade>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">2151</id>
+                              <code>MESFL</code>
+                              <scientific_name>Mesoplasma florum</scientific_name>
+                              <synonym>Acholeplasma florum</synonym>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">134821</id>
+                            <code>UREPA</code>
+                            <scientific_name>Ureaplasma parvum</scientific_name>
+                            <synonym>Ureaplasma urealyticum biotype 1</synonym>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <name>b_236</name>
+                        <taxonomy>
+                          <id provider="uniprot">137</id>
+                          <scientific_name>Spirochaetaceae</scientific_name>
+                          <rank>family</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">139</id>
+                            <code>BORBU</code>
+                            <scientific_name>Borrelia burgdorferi</scientific_name>
+                            <common_name>Lyme disease spirochete</common_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">160</id>
+                            <code>TREPA</code>
+                            <scientific_name>Treponema pallidum</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <name>b_244</name>
+                      <clade>
+                        <name>b_242</name>
+                        <taxonomy>
+                          <id provider="uniprot">1113537</id>
+                          <scientific_name>Chlamydia/Chlamydophila group</scientific_name>
+                        </taxonomy>
+                        <clade>
+                          <name>b_240</name>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">83558</id>
+                              <code>CHLPN</code>
+                              <scientific_name>Chlamydia pneumoniae</scientific_name>
+                              <synonym>Chlamydophila pneumoniae</synonym>
+                              <rank>species</rank>
+                            </taxonomy>
+                          </clade>
+                          <clade>
+                            <taxonomy>
+                              <id provider="uniprot">264202</id>
+                              <code>CHLFF</code>
+                              <scientific_name>Chlamydophila felis (strain Fe/C-56)</scientific_name>
+                            </taxonomy>
+                          </clade>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">83560</id>
+                            <code>CHLMU</code>
+                            <scientific_name>Chlamydia muridarum</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">785</id>
+                          <code>RICTY</code>
+                          <scientific_name>Rickettsia typhi</scientific_name>
+                          <rank>species</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">28211</id>
+                      <scientific_name>Alphaproteobacteria</scientific_name>
+                      <rank>class</rank>
+                    </taxonomy>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">38323</id>
+                        <code>BARHE</code>
+                        <scientific_name>Bartonella henselae</scientific_name>
+                        <synonym>Rochalimaea henselae</synonym>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">198252</id>
+                        <code>PELUB</code>
+                        <scientific_name>Pelagibacter ubique</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">780</id>
+                        <scientific_name>Rickettsia</scientific_name>
+                        <rank>genus</rank>
+                      </taxonomy>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">391896</id>
+                          <code>RICB8</code>
+                          <scientific_name>Rickettsia bellii (strain OSU 85-389)</scientific_name>
+                        </taxonomy>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">452659</id>
+                          <code>RICRO</code>
+                          <scientific_name>Rickettsia rickettsii (strain Iowa)</scientific_name>
+                          <rank>strain</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">263</id>
+                    <code>FRATU</code>
+                    <scientific_name>Francisella tularensis</scientific_name>
+                    <rank>species</rank>
+                  </taxonomy>
+                </clade>
+              </clade>
+              <clade>
+                <name>b_262</name>
+                <clade>
+                  <name>b_260</name>
+                  <clade>
+                    <name>b_258</name>
+                    <taxonomy>
+                      <id provider="uniprot">186826</id>
+                      <scientific_name>Lactobacillales</scientific_name>
+                      <rank>order</rank>
+                    </taxonomy>
+                    <clade>
+                      <name>b_256</name>
+                      <taxonomy>
+                        <id provider="uniprot">1300</id>
+                        <scientific_name>Streptococcaceae</scientific_name>
+                        <rank>family</rank>
+                      </taxonomy>
+                      <clade>
+                        <name>b_254</name>
+                        <taxonomy>
+                          <id provider="uniprot">1301</id>
+                          <scientific_name>Streptococcus</scientific_name>
+                          <rank>genus</rank>
+                        </taxonomy>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">1313</id>
+                            <code>STRPN</code>
+                            <scientific_name>Streptococcus pneumoniae</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                        <clade>
+                          <taxonomy>
+                            <id provider="uniprot">1314</id>
+                            <code>STRPY</code>
+                            <scientific_name>Streptococcus pyogenes</scientific_name>
+                            <rank>species</rank>
+                          </taxonomy>
+                        </clade>
+                      </clade>
+                      <clade>
+                        <taxonomy>
+                          <id provider="uniprot">1360</id>
+                          <code>LACLA</code>
+                          <scientific_name>Lactococcus lactis subsp. lactis</scientific_name>
+                          <synonym>Streptococcus lactis</synonym>
+                          <rank>subspecies</rank>
+                        </taxonomy>
+                      </clade>
+                    </clade>
+                    <clade>
+                      <taxonomy>
+                        <id provider="uniprot">1579</id>
+                        <code>LACAC</code>
+                        <scientific_name>Lactobacillus acidophilus</scientific_name>
+                        <rank>species</rank>
+                      </taxonomy>
+                    </clade>
+                  </clade>
+                  <clade>
+                    <taxonomy>
+                      <id provider="uniprot">216816</id>
+                      <code>BIFLO</code>
+                      <scientific_name>Bifidobacterium longum</scientific_name>
+                      <rank>species</rank>
+                    </taxonomy>
+                  </clade>
+                </clade>
+                <clade>
+                  <taxonomy>
+                    <id provider="uniprot">851</id>
+                    <code>FUSNU</code>
+                    <scientific_name>Fusobacterium nucleatum</scientific_name>
+                    <rank>species</rank>
+                  </taxonomy>
+                </clade>
+              </clade>
+            </clade>
+            <clade>
+              <name>b_266</name>
+              <taxonomy>
+                <id provider="uniprot">61434</id>
+                <scientific_name>Dehalococcoides</scientific_name>
+                <rank>genus</rank>
+              </taxonomy>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">243164</id>
+                  <code>DEHE1</code>
+                  <scientific_name>Dehalococcoides ethenogenes (strain 195)</scientific_name>
+                </taxonomy>
+              </clade>
+              <clade>
+                <taxonomy>
+                  <id provider="uniprot">216389</id>
+                  <code>DEHSB</code>
+                  <scientific_name>Dehalococcoides sp. (strain BAV1)</scientific_name>
+                  <rank>species</rank>
+                </taxonomy>
+              </clade>
+            </clade>
+          </clade>
+        </clade>
+        <clade>
+          <name>b_277</name>
+          <taxonomy>
+            <id provider="uniprot">29547</id>
+            <scientific_name>Epsilonproteobacteria</scientific_name>
+            <rank>class</rank>
+          </taxonomy>
+          <clade>
+            <name>b_273</name>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">387092</id>
+                <code>NITSB</code>
+                <scientific_name>Nitratiruptor sp. (strain SB155-2)</scientific_name>
+                <rank>species</rank>
+              </taxonomy>
+            </clade>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">387093</id>
+                <code>SULNB</code>
+                <scientific_name>Sulfurovum sp. (strain NBC37-1)</scientific_name>
+                <rank>species</rank>
+              </taxonomy>
+            </clade>
+          </clade>
+          <clade>
+            <name>b_276</name>
+            <taxonomy>
+              <id provider="uniprot">213849</id>
+              <scientific_name>Campylobacterales</scientific_name>
+              <rank>order</rank>
+            </taxonomy>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">197</id>
+                <code>CAMJE</code>
+                <scientific_name>Campylobacter jejuni</scientific_name>
+                <rank>species</rank>
+              </taxonomy>
+            </clade>
+            <clade>
+              <taxonomy>
+                <id provider="uniprot">357544</id>
+                <code>HELPH</code>
+                <scientific_name>Helicobacter pylori (strain HPAG1)</scientific_name>
+              </taxonomy>
+            </clade>
+          </clade>
+        </clade>
+      </clade>
+      <clade>
+        <taxonomy>
+          <id provider="uniprot">224324</id>
+          <code>AQUAE</code>
+          <scientific_name>Aquifex aeolicus (strain VF5)</scientific_name>
+          <rank>strain</rank>
+        </taxonomy>
+      </clade>
+    </clade>
+  </clade>
+</phylogeny>
 </phyloxml>
\ No newline at end of file