<?xml version="1.0" encoding="UTF-8"?>
+<!--
+ Retrieved for Jalview 04-Apr-2019 from https://www.uniprot.org/docs/uniprot.xsd
+ Uniprot Release 2018_11: https://www.uniprot.org/news/2018/12/05/release
+ Generate Java binding classes by running this command in the schemas parent directory:
+ xjc schemas/uniprot.xsd -d src -p jalview.xml.binding.uniprot
+-->
<!-- *****************************************************************************
UniProt Knowledgebase
- Version: $Revision: 1.3 $
- Date: $Date: 2015/04/07 15:00:57 $
+ Version: $Revision$
+ Date: $Date$
Copyright (c) 2011 UniProt consortium
All rights reserved.
*******************************************************************************-->
<xs:schema targetNamespace="http://uniprot.org/uniprot" xmlns:xs="http://www.w3.org/2001/XMLSchema"
xmlns="http://uniprot.org/uniprot" elementFormDefault="qualified">
-<!--
- Retrieved for Jalview 13-Sep-2018 from https://www.uniprot.org/docs/uniprot.xsd
- Java binding classes are generated by
- xjc schemas/uniprot.xsd -d src -p jalview.xml.binding.uniprot
--->
<!-- XML Schema definition for the UniProtKB XML format
Tested with:
-XSV (XML Schema Validator), http://www.w3.org/2001/03/webdata/xsv
-->
+
+
<!-- Root element definition begins -->
<xs:element name="uniprot">
<xs:annotation>
<xs:sequence>
<xs:annotation>
+ <xs:documentation>Used in 'catalytic activity' annotations.</xs:documentation>
+ </xs:annotation>
+ <xs:element name="reaction" type="reactionType"/>
+ <xs:element name="physiologicalReaction" type="physiologicalReactionType" minOccurs="0" maxOccurs="2"/>
+ </xs:sequence>
+
+ <xs:sequence>
+ <xs:annotation>
<xs:documentation>Used in 'cofactor' annotations.</xs:documentation>
</xs:annotation>
<xs:element name="cofactor" type="cofactorType" maxOccurs="unbounded"/>
</xs:sequence>
</xs:group>
+ <xs:complexType name="reactionType">
+ <xs:annotation>
+ <xs:documentation>Describes a chemical reaction.</xs:documentation>
+ </xs:annotation>
+ <xs:sequence>
+ <xs:element name="text" type="xs:string"/>
+ <xs:element name="dbReference" type="dbReferenceType" minOccurs="1" maxOccurs="unbounded"/>
+ </xs:sequence>
+ <xs:attribute name="evidence" type="intListType" use="optional"/>
+ </xs:complexType>
+
+ <xs:complexType name="physiologicalReactionType">
+ <xs:annotation>
+ <xs:documentation>Describes a physiological reaction.</xs:documentation>
+ </xs:annotation>
+ <xs:sequence>
+ <xs:element name="dbReference" type="dbReferenceType"/>
+ </xs:sequence>
+ <xs:attribute name="direction" use="required">
+ <xs:simpleType>
+ <xs:restriction base="xs:string">
+ <xs:enumeration value="left-to-right"/>
+ <xs:enumeration value="right-to-left"/>
+ </xs:restriction>
+ </xs:simpleType>
+ </xs:attribute>
+ <xs:attribute name="evidence" type="intListType" use="optional"/>
+ </xs:complexType>
+
<xs:complexType name="cofactorType">
<xs:annotation>
<xs:documentation>Describes a cofactor.</xs:documentation>
<xs:simpleType name="intListType">
<xs:list itemType="xs:int"/>
</xs:simpleType>
-</xs:schema>
+</xs:schema>
\ No newline at end of file
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
* <choice minOccurs="0">
* <group ref="{http://uniprot.org/uniprot}bpcCommentGroup"/>
* <sequence>
+ * <element name="reaction" type="{http://uniprot.org/uniprot}reactionType"/>
+ * <element name="physiologicalReaction" type="{http://uniprot.org/uniprot}physiologicalReactionType" maxOccurs="2" minOccurs="0"/>
+ * </sequence>
+ * <sequence>
* <element name="cofactor" type="{http://uniprot.org/uniprot}cofactorType" maxOccurs="unbounded"/>
* </sequence>
* <sequence>
"phDependence",
"redoxPotential",
"temperatureDependence",
+ "reaction",
+ "physiologicalReaction",
"cofactor",
"subcellularLocation",
"conflict",
protected CommentType.PhDependence phDependence;
protected CommentType.RedoxPotential redoxPotential;
protected CommentType.TemperatureDependence temperatureDependence;
+ protected ReactionType reaction;
+ protected List<PhysiologicalReactionType> physiologicalReaction;
protected List<CofactorType> cofactor;
protected List<SubcellularLocationType> subcellularLocation;
protected CommentType.Conflict conflict;
}
/**
+ * Gets the value of the reaction property.
+ *
+ * @return
+ * possible object is
+ * {@link ReactionType }
+ *
+ */
+ public ReactionType getReaction() {
+ return reaction;
+ }
+
+ /**
+ * Sets the value of the reaction property.
+ *
+ * @param value
+ * allowed object is
+ * {@link ReactionType }
+ *
+ */
+ public void setReaction(ReactionType value) {
+ this.reaction = value;
+ }
+
+ /**
+ * Gets the value of the physiologicalReaction property.
+ *
+ * <p>
+ * This accessor method returns a reference to the live list,
+ * not a snapshot. Therefore any modification you make to the
+ * returned list will be present inside the JAXB object.
+ * This is why there is not a <CODE>set</CODE> method for the physiologicalReaction property.
+ *
+ * <p>
+ * For example, to add a new item, do as follows:
+ * <pre>
+ * getPhysiologicalReaction().add(newItem);
+ * </pre>
+ *
+ *
+ * <p>
+ * Objects of the following type(s) are allowed in the list
+ * {@link PhysiologicalReactionType }
+ *
+ *
+ */
+ public List<PhysiologicalReactionType> getPhysiologicalReaction() {
+ if (physiologicalReaction == null) {
+ physiologicalReaction = new ArrayList<PhysiologicalReactionType>();
+ }
+ return this.physiologicalReaction;
+ }
+
+ /**
* Gets the value of the cofactor property.
*
* <p>
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
}
/**
+ * Create an instance of {@link PhysiologicalReactionType }
+ *
+ */
+ public PhysiologicalReactionType createPhysiologicalReactionType() {
+ return new PhysiologicalReactionType();
+ }
+
+ /**
* Create an instance of {@link CofactorType }
*
*/
}
/**
+ * Create an instance of {@link ReactionType }
+ *
+ */
+ public ReactionType createReactionType() {
+ return new ReactionType();
+ }
+
+ /**
* Create an instance of {@link SourceType }
*
*/
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
--- /dev/null
+//
+// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
+// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
+// Any modifications to this file will be lost upon recompilation of the source schema.
+// Generated on: 2019.04.05 at 08:01:44 AM BST
+//
+
+
+package jalview.xml.binding.uniprot;
+
+import java.util.ArrayList;
+import java.util.List;
+import javax.xml.bind.annotation.XmlAccessType;
+import javax.xml.bind.annotation.XmlAccessorType;
+import javax.xml.bind.annotation.XmlAttribute;
+import javax.xml.bind.annotation.XmlElement;
+import javax.xml.bind.annotation.XmlType;
+
+
+/**
+ * Describes a physiological reaction.
+ *
+ * <p>Java class for physiologicalReactionType complex type.
+ *
+ * <p>The following schema fragment specifies the expected content contained within this class.
+ *
+ * <pre>
+ * <complexType name="physiologicalReactionType">
+ * <complexContent>
+ * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ * <sequence>
+ * <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType"/>
+ * </sequence>
+ * <attribute name="direction" use="required">
+ * <simpleType>
+ * <restriction base="{http://www.w3.org/2001/XMLSchema}string">
+ * <enumeration value="left-to-right"/>
+ * <enumeration value="right-to-left"/>
+ * </restriction>
+ * </simpleType>
+ * </attribute>
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </restriction>
+ * </complexContent>
+ * </complexType>
+ * </pre>
+ *
+ *
+ */
+@XmlAccessorType(XmlAccessType.FIELD)
+@XmlType(name = "physiologicalReactionType", propOrder = {
+ "dbReference"
+})
+public class PhysiologicalReactionType {
+
+ @XmlElement(required = true)
+ protected DbReferenceType dbReference;
+ @XmlAttribute(name = "direction", required = true)
+ protected String direction;
+ @XmlAttribute(name = "evidence")
+ protected List<Integer> evidence;
+
+ /**
+ * Gets the value of the dbReference property.
+ *
+ * @return
+ * possible object is
+ * {@link DbReferenceType }
+ *
+ */
+ public DbReferenceType getDbReference() {
+ return dbReference;
+ }
+
+ /**
+ * Sets the value of the dbReference property.
+ *
+ * @param value
+ * allowed object is
+ * {@link DbReferenceType }
+ *
+ */
+ public void setDbReference(DbReferenceType value) {
+ this.dbReference = value;
+ }
+
+ /**
+ * Gets the value of the direction property.
+ *
+ * @return
+ * possible object is
+ * {@link String }
+ *
+ */
+ public String getDirection() {
+ return direction;
+ }
+
+ /**
+ * Sets the value of the direction property.
+ *
+ * @param value
+ * allowed object is
+ * {@link String }
+ *
+ */
+ public void setDirection(String value) {
+ this.direction = value;
+ }
+
+ /**
+ * Gets the value of the evidence property.
+ *
+ * <p>
+ * This accessor method returns a reference to the live list,
+ * not a snapshot. Therefore any modification you make to the
+ * returned list will be present inside the JAXB object.
+ * This is why there is not a <CODE>set</CODE> method for the evidence property.
+ *
+ * <p>
+ * For example, to add a new item, do as follows:
+ * <pre>
+ * getEvidence().add(newItem);
+ * </pre>
+ *
+ *
+ * <p>
+ * Objects of the following type(s) are allowed in the list
+ * {@link Integer }
+ *
+ *
+ */
+ public List<Integer> getEvidence() {
+ if (evidence == null) {
+ evidence = new ArrayList<Integer>();
+ }
+ return this.evidence;
+ }
+
+}
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
--- /dev/null
+//
+// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
+// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
+// Any modifications to this file will be lost upon recompilation of the source schema.
+// Generated on: 2019.04.05 at 08:01:44 AM BST
+//
+
+
+package jalview.xml.binding.uniprot;
+
+import java.util.ArrayList;
+import java.util.List;
+import javax.xml.bind.annotation.XmlAccessType;
+import javax.xml.bind.annotation.XmlAccessorType;
+import javax.xml.bind.annotation.XmlAttribute;
+import javax.xml.bind.annotation.XmlElement;
+import javax.xml.bind.annotation.XmlType;
+
+
+/**
+ * Describes a chemical reaction.
+ *
+ * <p>Java class for reactionType complex type.
+ *
+ * <p>The following schema fragment specifies the expected content contained within this class.
+ *
+ * <pre>
+ * <complexType name="reactionType">
+ * <complexContent>
+ * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ * <sequence>
+ * <element name="text" type="{http://www.w3.org/2001/XMLSchema}string"/>
+ * <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType" maxOccurs="unbounded"/>
+ * </sequence>
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </restriction>
+ * </complexContent>
+ * </complexType>
+ * </pre>
+ *
+ *
+ */
+@XmlAccessorType(XmlAccessType.FIELD)
+@XmlType(name = "reactionType", propOrder = {
+ "text",
+ "dbReference"
+})
+public class ReactionType {
+
+ @XmlElement(required = true)
+ protected String text;
+ @XmlElement(required = true)
+ protected List<DbReferenceType> dbReference;
+ @XmlAttribute(name = "evidence")
+ protected List<Integer> evidence;
+
+ /**
+ * Gets the value of the text property.
+ *
+ * @return
+ * possible object is
+ * {@link String }
+ *
+ */
+ public String getText() {
+ return text;
+ }
+
+ /**
+ * Sets the value of the text property.
+ *
+ * @param value
+ * allowed object is
+ * {@link String }
+ *
+ */
+ public void setText(String value) {
+ this.text = value;
+ }
+
+ /**
+ * Gets the value of the dbReference property.
+ *
+ * <p>
+ * This accessor method returns a reference to the live list,
+ * not a snapshot. Therefore any modification you make to the
+ * returned list will be present inside the JAXB object.
+ * This is why there is not a <CODE>set</CODE> method for the dbReference property.
+ *
+ * <p>
+ * For example, to add a new item, do as follows:
+ * <pre>
+ * getDbReference().add(newItem);
+ * </pre>
+ *
+ *
+ * <p>
+ * Objects of the following type(s) are allowed in the list
+ * {@link DbReferenceType }
+ *
+ *
+ */
+ public List<DbReferenceType> getDbReference() {
+ if (dbReference == null) {
+ dbReference = new ArrayList<DbReferenceType>();
+ }
+ return this.dbReference;
+ }
+
+ /**
+ * Gets the value of the evidence property.
+ *
+ * <p>
+ * This accessor method returns a reference to the live list,
+ * not a snapshot. Therefore any modification you make to the
+ * returned list will be present inside the JAXB object.
+ * This is why there is not a <CODE>set</CODE> method for the evidence property.
+ *
+ * <p>
+ * For example, to add a new item, do as follows:
+ * <pre>
+ * getEvidence().add(newItem);
+ * </pre>
+ *
+ *
+ * <p>
+ * Objects of the following type(s) are allowed in the list
+ * {@link Integer }
+ *
+ *
+ */
+ public List<Integer> getEvidence() {
+ if (evidence == null) {
+ evidence = new ArrayList<Integer>();
+ }
+ return this.evidence;
+ }
+
+}
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a>
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2018.09.13 at 10:18:53 AM BST
+// Generated on: 2019.04.05 at 08:01:44 AM BST
//
@javax.xml.bind.annotation.XmlSchema(namespace = "http://uniprot.org/uniprot", elementFormDefault = javax.xml.bind.annotation.XmlNsForm.QUALIFIED)
git://source.jalview.org / jalview.git / commitdiff