dont add new seqs to group

diff --git a/src/jalview/datamodel/Alignment.java b/src/jalview/datamodel/Alignment.java
index 8535d84..86d2c0e 100755 (executable)
--- a/src/jalview/datamodel/Alignment.java
+++ b/src/jalview/datamodel/Alignment.java
@@ -40,7 +40,6 @@ public class Alignment implements AlignmentI
   }\r
 \r
   /** Adds a sequence to the alignment.  Recalculates maxLength and size.\r
-   * Should put the new sequence in a sequence group!!!\r
    *\r
    * @param snew\r
    */\r
@@ -55,8 +54,7 @@ public class Alignment implements AlignmentI
   }\r
 \r
   /** Adds a sequence to the alignment.  Recalculates maxLength and size.\r
-   * Should put the new sequence in a sequence group!!!\r
-   *\r
+    *\r
    * @param snew\r
    */\r
   public void setSequenceAt(int i,SequenceI snew) {\r
@@ -64,8 +62,6 @@ public class Alignment implements AlignmentI
     deleteSequence(oldseq);\r
 \r
     sequences.setElementAt(snew,i);\r
-\r
-    ((SequenceGroup)groups.lastElement()).addSequence(snew);\r
   }\r
 \r
   public Vector getGroups() {\r