sr = new SequenceRenderer(av);\r
sr.renderGaps( false );\r
fr = new FeatureRenderer(av);\r
- fr.transparency = ap.seqPanel.seqCanvas.getFeatureRenderer().transparency;\r
+\r
\r
// scale the initial size of overviewpanel to shape of alignment\r
float initialScale = (float) av.alignment.getWidth() / (float) av.alignment.getHeight();\r
{\r
miniMe = null;\r
\r
+ if (av.showSequenceFeatures)\r
+ {\r
+ fr.featuresDisplayed = ap.seqPanel.seqCanvas.getFeatureRenderer().\r
+ featuresDisplayed;\r
+ //fr.featureGroups = ap.seqPanel.seqCanvas.getFeatureRenderer().featureGroups;\r
+ fr.featureColours = ap.seqPanel.seqCanvas.getFeatureRenderer().featureColours;\r
+ fr.transparency = ap.seqPanel.seqCanvas.getFeatureRenderer().transparency;\r
+ }\r
+\r
int alwidth = av.alignment.getWidth();\r
int alheight = av.alignment.getHeight();\r
\r