// jan.update(getjAlignmentAnnotation(jal, an[a])); // update from another annotation object in place.
Cache.log.debug("update from vamsas alignment annotation to existing jalview alignment annotation.");
- if (an[i].getModifiable()) {
+ if (an[j].getModifiable()) {
// TODO: user defined annotation is totally mutable... - so load it up or throw away if locally edited.
Cache.log.info("NOT IMPLEMENTED - Recovering user-modifiable annotation - yet...");
}