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JAL-2956 don't load (non-existent) HMMER jar entry in New View
author
gmungoc
<g.m.carstairs@dundee.ac.uk>
Wed, 6 Jun 2018 11:03:57 +0000
(12:03 +0100)
committer
gmungoc
<g.m.carstairs@dundee.ac.uk>
Wed, 6 Jun 2018 11:03:57 +0000
(12:03 +0100)
src/jalview/gui/Jalview2XML.java
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diff --git
a/src/jalview/gui/Jalview2XML.java
b/src/jalview/gui/Jalview2XML.java
index
aed73d6
..
9af840a
100644
(file)
--- a/
src/jalview/gui/Jalview2XML.java
+++ b/
src/jalview/gui/Jalview2XML.java
@@
-3192,7
+3192,7
@@
public class Jalview2XML
* load any HMMER profile
*/
String hmmJarFile = jseqs[i].getHmmerProfile();
- if (hmmJarFile != null)
+ if (hmmJarFile != null && jprovider != null)
{
loadHmmerProfile(jprovider, hmmJarFile, alignmentSeq);
}