JAL-3111 release notes for JAL-2789 JAL-2744 JAL-1889 JAL-3287 JAL-3289 JAL-3288
authorJim Procter <jprocter@issues.jalview.org>
Tue, 2 Jul 2019 14:30:11 +0000 (15:30 +0100)
committerJim Procter <jprocter@issues.jalview.org>
Tue, 2 Jul 2019 14:30:45 +0000 (15:30 +0100)
help/help/html/releases.html

index d6ebd1b..2f09fef 100755 (executable)
@@ -101,12 +101,17 @@ li:before {
             implementation that allows updates) used for Sequence Feature collections</li>
           <li>
                                                        <li>
-                                                               <!-- JAL-2808,JAL-2069,JAL-2820 -->Sequence features can be filtered and
-                                                               shaded according to any associated attributes (e.g. variant
-                                                               attributes from VCF file, or key-value pairs imported from
-                                                               column 9 of GFF file)
-                                                       </li>
-                                                       <li>
+                <!-- JAL-2744, JAL-2808,JAL-2069,JAL-2820 -->Sequence
+                features can be filtered and shaded according to any
+                associated attributes (e.g. variant attributes from VCF
+                file, or key-value pairs imported from column 9 of GFF
+                file)
+              </li>
+              <li>
+                <!-- JAL-2879 -->Feature Attributes and shading schemes
+                stored and restored from Jalview Projects
+              </li>
+              <li>
                                                                <!-- JAL-3334 -->Use full Sequence Ontology (via BioJava) to
                                                                recognise variant features
                                                        </li>
@@ -250,18 +255,36 @@ li:before {
                                                <!-- JAL-3196,JAL-3179.JAL-2671 -->Build system migrated from Ant to Gradle
                                        </li>
                                        <li><!-- JAL-1424 -->Enhanced checks for missing and duplicated keys in Message bundles</li>
-                                       <li>
-                                               <!-- JAL-3225 -->Eclipse project configuration managed with
-                                               gradle-eclipse
-                                       </li>
-          <li><!-- JAL-3174,JAL-2886,JAL-2729 -->
-          Atlassian Bamboo continuous integration for
-            unattended Test Suite execution</li>
+          <li>
+            <!-- JAL-3225 -->Eclipse project configuration managed with
+            gradle-eclipse
+          </li>
+          <li>
+            <!-- JAL-3174,JAL-2886,JAL-2729,JAL-1889 --> Atlassian
+            Bamboo continuous integration for unattended Test Suite
+            execution
+          </li>
           <li>
             <!-- JAL-2864 -->Memory test suite to detect leaks in common
-            operations</li>
-          <li><!-- JAL-2360,JAL-2416 -->More unit test coverage, and minor issues resolved.</li>
-          <li><!-- JAL-3248 -->Developer documentation migrated to markdown (with HTML rendering)</li>          
+            operations
+          </li>
+          <li>
+            <!-- JAL-2360,JAL-2416 -->More unit test coverage, and minor
+            issues resolved.
+          </li>
+          <li>
+            <!-- JAL-3248 -->Developer documentation migrated to
+            markdown (with HTML rendering)
+          </li>
+          <li>
+            <!-- JAL-3287 -->HelpLinksChecker runs on Windows
+          </li>
+          <li>
+            <!-- JAL-3289 -->New URLs for publishing development
+            versions of Jalview
+          </li>
+          <li>
+          <li>
         </ul>
       </td>
                        <td align="left" valign="top">
@@ -458,7 +481,14 @@ li:before {
                                                <!-- JAL-2986 -->Sequence.findIndex returns wrong value when
                                                sequence's End is greater than its length
                                        </li>
-                               </ul> <em>New Known Defects</em>
+          <li><strong>Bugs fixed for Java 11 Support (not
+              yet on general release)</strong>
+            <ul>
+              <li>
+                <!-- JAL-3288 -->Menus work properly in split-screen
+              </li>
+            </ul></li>
+        </ul> <em>New Known Defects</em>
                                <ul>
                                <li><!-- JAL-3340 -->Select columns containing feature by double clicking ignores bounds of an existing selected region
                                </li>