A flauss recommendations

diff --git a/src/jalview/jbappletgui/GAlignFrame.java b/src/jalview/jbappletgui/GAlignFrame.java
index 3d09731..42b2d63 100755 (executable)
--- a/src/jalview/jbappletgui/GAlignFrame.java
+++ b/src/jalview/jbappletgui/GAlignFrame.java
@@ -215,7 +215,7 @@ public class GAlignFrame extends Frame
         viewTextMenuItem_actionPerformed(null);\r
       }\r
     });\r
-    sortPairwiseMenuItem.setLabel("Pairwise Identity");\r
+    sortPairwiseMenuItem.setLabel("By Pairwise Identity");\r
     sortPairwiseMenuItem.addActionListener(new java.awt.event.ActionListener()\r
     {\r
       public void actionPerformed(ActionEvent e)\r
@@ -223,7 +223,7 @@ public class GAlignFrame extends Frame
         sortPairwiseMenuItem_actionPerformed(e);\r
       }\r
     });\r
-    sortIDMenuItem.setLabel("ID");\r
+    sortIDMenuItem.setLabel("By ID");\r
     sortIDMenuItem.addActionListener(new java.awt.event.ActionListener()\r
     {\r
       public void actionPerformed(ActionEvent e)\r
@@ -231,7 +231,7 @@ public class GAlignFrame extends Frame
         sortIDMenuItem_actionPerformed(e);\r
       }\r
     });\r
-    sortGroupMenuItem.setLabel("Group");\r
+    sortGroupMenuItem.setLabel("By Group");\r
     sortGroupMenuItem.addActionListener(new java.awt.event.ActionListener()\r
     {\r
       public void actionPerformed(ActionEvent e)\r
@@ -478,7 +478,7 @@ public class GAlignFrame extends Frame
     });\r
     searchMenu.setLabel("Search");\r
 \r
-    abovePIDThreshold.setLabel("Above Identity threshold");\r
+    abovePIDThreshold.setLabel("Above Identity Threshold");\r
     abovePIDThreshold.addItemListener(new java.awt.event.ItemListener()\r
     {\r
       public void itemStateChanged(ItemEvent e)\r
@@ -621,7 +621,7 @@ public class GAlignFrame extends Frame
         modifyConservation_actionPerformed(e);\r
       }\r
     });\r
-    sortByTreeMenu.setLabel("Tree Order");\r
+    sortByTreeMenu.setLabel("By Tree Order");\r
     sort.setLabel("Sort");\r
     calculate.setLabel("Calculate Tree");\r
     inputText.setLabel("Input from textbox");\r
@@ -725,8 +725,8 @@ public class GAlignFrame extends Frame
     Menu1.add(pasteNew);\r
     Menu1.add(pasteThis);\r
     sort.add(sortIDMenuItem);\r
-    sort.add(sortGroupMenuItem);\r
     sort.add(sortByTreeMenu);\r
+    sort.add(sortGroupMenuItem);\r
     sort.add(sortPairwiseMenuItem);\r
     calculate.add(averageDistanceTreeMenuItem);\r
     calculate.add(neighbourTreeMenuItem);\r