JAL-2079 use new service to retrieve Rfam Seed alignment
authorJim Procter <jprocter@issues.jalview.org>
Tue, 26 Apr 2016 16:33:02 +0000 (17:33 +0100)
committerJim Procter <jprocter@issues.jalview.org>
Tue, 26 Apr 2016 16:45:51 +0000 (17:45 +0100)
src/jalview/ws/dbsources/RfamSeed.java

index c7851f2..77fb841 100644 (file)
@@ -42,11 +42,16 @@ public class RfamSeed extends Rfam
   @Override
   protected String getXFAMURL()
   {
-    return "http://rfam.xfam.org/family/alignment/download/format?alnType=seed&nseLabels=0&format=stockholm&acc=";
+    return "http://rfam.xfam.org/family/";
     // Janelia Farms url
     // "http://rfam.janelia.org/cgi-bin/getalignment?type=seed&fmt=stockholm&acc=";
   }
 
+  @Override
+  public String getXFAMURLSUFFIX()
+  {
+    return "/alignment";
+  }
   /*
    * (non-Javadoc)
    *