"and possibly genome multiple-sequence ('fasta') files> <output directory for sequences> <output directory for domains> [mapping file for " +
"genome multiple-sequence ('fasta') files not in input dir]" )
puts()
- puts( " option: -" + EXT_OPTION + "=<int>: to extend extracted domains" )
- puts( " -" + EXTRACT_LINKERS_OPTION + ": to extend linkers" )
+ puts( " option: -" + EXT_OPTION + "=<int>: to extend extracted domains" )
+ puts( " -" + EXTRACT_LINKERS_OPTION + " : to extract linkers" )
puts()
puts( " " + "Example: \"mse.rb .prot . seqs doms ../genome_locations.txt\"" )
puts()