linkers!
authorcmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Fri, 20 Jul 2012 21:19:27 +0000 (21:19 +0000)
committercmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Fri, 20 Jul 2012 21:19:27 +0000 (21:19 +0000)
forester/ruby/evoruby/lib/evo/apps/multi_sequence_extractor.rb

index e610782..ef709e9 100644 (file)
@@ -523,8 +523,8 @@ module Evoruby
          "and possibly genome multiple-sequence ('fasta') files> <output directory for sequences> <output directory for domains> [mapping file for " +
          "genome multiple-sequence ('fasta') files not in input dir]" )
       puts()
-      puts( "  option: -" + EXT_OPTION  + "=<int>: to extend extracted domains" )
-      puts( "          -" + EXTRACT_LINKERS_OPTION  + ": to extend linkers" )
+      puts(             "  option: -" + EXT_OPTION  + "=<int>: to extend extracted domains" )
+      puts( "          -" + EXTRACT_LINKERS_OPTION  + "      : to extract linkers" )
       puts()
       puts( "  " + "Example: \"mse.rb .prot . seqs doms ../genome_locations.txt\"" )
       puts()