--- /dev/null
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+package jalview.jbgui;
+
+import java.awt.BorderLayout;
+import java.awt.Color;
+import java.awt.FlowLayout;
+import java.awt.Font;
+import java.awt.GridLayout;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
+
+import javax.swing.JButton;
+import javax.swing.JCheckBoxMenuItem;
+import javax.swing.JComboBox;
+import javax.swing.JInternalFrame;
+import javax.swing.JLabel;
+import javax.swing.JMenu;
+import javax.swing.JMenuBar;
+import javax.swing.JMenuItem;
+import javax.swing.JPanel;
+import javax.swing.event.MenuEvent;
+import javax.swing.event.MenuListener;
+
+import jalview.util.ImageMaker.TYPE;
+import jalview.util.MessageManager;
+
+public class GPaSiMapPanel extends JInternalFrame
+{
+ private static final Font VERDANA_12 = new Font("Verdana", 0, 12);
+
+ protected JComboBox<String> xCombobox = new JComboBox<>();
+
+ protected JComboBox<String> yCombobox = new JComboBox<>();
+
+ protected JComboBox<String> zCombobox = new JComboBox<>();
+
+ protected JMenu viewMenu = new JMenu();
+
+ protected JCheckBoxMenuItem showLabels = new JCheckBoxMenuItem();
+
+ protected JMenu associateViewsMenu = new JMenu();
+
+ protected JLabel statusBar = new JLabel();
+
+ protected JPanel statusPanel = new JPanel();
+
+ protected JMenuItem originalSeqData;
+
+ /**
+ * Constructor
+ */
+ public GPaSiMapPanel()
+ {
+ try
+ {
+ jbInit();
+ } catch (Exception e)
+ {
+ e.printStackTrace();
+ }
+
+ for (int i = 1; i < 8; i++)
+ {
+ xCombobox.addItem("dim " + i);
+ yCombobox.addItem("dim " + i);
+ zCombobox.addItem("dim " + i);
+ }
+ }
+ public GPaSiMapPanel(int dim)
+ {
+ try
+ {
+ jbInit();
+ } catch (Exception e)
+ {
+ e.printStackTrace();
+ }
+
+ for (int i = 1; i <= dim; i++)
+ {
+ xCombobox.addItem("dim " + i);
+ yCombobox.addItem("dim " + i);
+ zCombobox.addItem("dim " + i);
+ }
+ }
+
+ private void jbInit() throws Exception
+ {
+ setFrameIcon(null);
+ setName("jalview-pca");
+ this.getContentPane().setLayout(new BorderLayout());
+ JPanel jPanel2 = new JPanel();
+ jPanel2.setLayout(new FlowLayout());
+ JLabel jLabel1 = new JLabel();
+ jLabel1.setFont(VERDANA_12);
+ jLabel1.setText("x=");
+ JLabel jLabel2 = new JLabel();
+ jLabel2.setFont(VERDANA_12);
+ jLabel2.setText("y=");
+ JLabel jLabel3 = new JLabel();
+ jLabel3.setFont(VERDANA_12);
+ jLabel3.setText("z=");
+ jPanel2.setBackground(Color.white);
+ jPanel2.setBorder(null);
+ zCombobox.setFont(VERDANA_12);
+ zCombobox.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ doDimensionChange();
+ }
+ });
+ yCombobox.setFont(VERDANA_12);
+ yCombobox.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ doDimensionChange();
+ }
+ });
+ xCombobox.setFont(VERDANA_12);
+ xCombobox.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ doDimensionChange();
+ }
+ });
+ JButton resetButton = new JButton();
+ resetButton.setFont(VERDANA_12);
+ resetButton.setText(MessageManager.getString("action.reset"));
+ resetButton.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ resetButton_actionPerformed();
+ }
+ });
+ JMenu fileMenu = new JMenu();
+ fileMenu.setText(MessageManager.getString("action.file"));
+ JMenu saveMenu = new JMenu();
+ saveMenu.setText(MessageManager.getString("action.save_as"));
+ JMenuItem eps = new JMenuItem("EPS");
+ eps.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ makePCAImage(TYPE.EPS);
+ }
+ });
+ JMenuItem png = new JMenuItem("PNG");
+ png.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ makePCAImage(TYPE.PNG);
+ }
+ });
+ JMenuItem outputValues = new JMenuItem();
+ outputValues.setText(MessageManager.getString("label.output_values"));
+ outputValues.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ outputValues_actionPerformed();
+ }
+ });
+ JMenuItem outputPoints = new JMenuItem();
+ outputPoints.setText(MessageManager.getString("label.output_points"));
+ outputPoints.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ outputPoints_actionPerformed();
+ }
+ });
+ JMenuItem outputProjPoints = new JMenuItem();
+ outputProjPoints.setText(
+ MessageManager.getString("label.output_transformed_points"));
+ outputProjPoints.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ outputProjPoints_actionPerformed();
+ }
+ });
+ JMenuItem print = new JMenuItem();
+ print.setText(MessageManager.getString("action.print"));
+ print.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ print_actionPerformed();
+ }
+ });
+ JMenuItem outputAlignment = new JMenuItem();
+ outputAlignment.setText(
+ MessageManager.getString("label.output_alignment"));
+ outputAlignment.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ outputAlignment_actionPerformed();
+ }
+ });
+ viewMenu.setText(MessageManager.getString("action.view"));
+ viewMenu.addMenuListener(new MenuListener()
+ {
+ @Override
+ public void menuSelected(MenuEvent e)
+ {
+ viewMenu_menuSelected();
+ }
+
+ @Override
+ public void menuDeselected(MenuEvent e)
+ {
+ }
+
+ @Override
+ public void menuCanceled(MenuEvent e)
+ {
+ }
+ });
+ showLabels.setText(MessageManager.getString("label.show_labels"));
+ showLabels.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ showLabels_actionPerformed();
+ }
+ });
+ JMenuItem bgcolour = new JMenuItem();
+ bgcolour.setText(MessageManager.getString("action.background_colour"));
+ bgcolour.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ bgcolour_actionPerformed();
+ }
+ });
+ originalSeqData = new JMenuItem();
+ originalSeqData.setText(MessageManager.getString("label.input_data"));
+ originalSeqData.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ originalSeqData_actionPerformed();
+ }
+ });
+ associateViewsMenu.setText(
+ MessageManager.getString("label.associate_nodes_with"));
+
+ statusPanel.setLayout(new GridLayout());
+ statusBar.setFont(VERDANA_12);
+ // statusPanel.setBackground(Color.lightGray);
+ // statusBar.setBackground(Color.lightGray);
+ // statusPanel.add(statusBar, null);
+ JPanel panelBar = new JPanel(new BorderLayout());
+ panelBar.add(jPanel2, BorderLayout.NORTH);
+ panelBar.add(statusPanel, BorderLayout.SOUTH);
+ this.getContentPane().add(panelBar, BorderLayout.SOUTH);
+ jPanel2.add(jLabel1, null);
+ jPanel2.add(xCombobox, null);
+ jPanel2.add(jLabel2, null);
+ jPanel2.add(yCombobox, null);
+ jPanel2.add(jLabel3, null);
+ jPanel2.add(zCombobox, null);
+ jPanel2.add(resetButton, null);
+
+ JMenuBar jMenuBar1 = new JMenuBar();
+ jMenuBar1.add(fileMenu);
+ jMenuBar1.add(viewMenu);
+ setJMenuBar(jMenuBar1);
+ fileMenu.add(saveMenu);
+ fileMenu.add(outputValues);
+ fileMenu.add(print);
+ fileMenu.add(originalSeqData);
+ fileMenu.add(outputPoints);
+ fileMenu.add(outputProjPoints);
+ fileMenu.add(outputAlignment);
+ saveMenu.add(eps);
+ saveMenu.add(png);
+ viewMenu.add(showLabels);
+ viewMenu.add(bgcolour);
+ viewMenu.add(associateViewsMenu);
+ }
+
+ protected void resetButton_actionPerformed()
+ {
+ }
+
+ protected void outputPoints_actionPerformed()
+ {
+ }
+
+ protected void outputProjPoints_actionPerformed()
+ {
+ }
+
+ protected void outputAlignment_actionPerformed()
+ {
+ }
+
+ public void makePCAImage(TYPE imageType)
+ {
+ }
+
+ protected void outputValues_actionPerformed()
+ {
+ }
+
+ protected void print_actionPerformed()
+ {
+ }
+
+ protected void showLabels_actionPerformed()
+ {
+ }
+
+ protected void bgcolour_actionPerformed()
+ {
+ }
+
+ protected void originalSeqData_actionPerformed()
+ {
+ }
+
+ protected void viewMenu_menuSelected()
+ {
+ }
+
+ protected void doDimensionChange()
+ {
+ }
+}
git://source.jalview.org / jalview.git / commitdiff