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JAL-3858 improved contactInterval computation and added detailed test coverage for...
[jalview.git] / j11lib /
2023-08-29 Ben SoaresMerge branch 'bug/JAL-4255_slf4j_missing_StaticLoggerBi... tree | commitdiff
2023-08-29 Ben SoaresJAL-4255 Added slf4j-nop jar and upgraded to last 1... tree | commitdiff
2023-08-23 Ben SoaresMerge branch 'improvement/JAL-4250_secondary_structure_... tree | commitdiff
2023-08-23 Ben SoaresJAL-4250 Updated jfreesvg to fix round stroke in linegraph. tree | commitdiff
2023-08-18 Ben SoaresMerge branch 'improvement/JAL-3830_remove_dock_icon_in_... tree | commitdiff
2023-08-18 Ben SoaresJAL-3416 flatlaf and flatlaf-extras 3.2 jars tree | commitdiff
2023-08-16 Ben SoaresJAL-3820 JAL-4189 Use the same LaunchUtils methods... tree | commitdiff
2023-06-16 Ben SoaresJAL-4001 Remove jgoogleanalytics code and jar tree | commitdiff
2023-05-25 Ben SoaresJAL-3820 JAL-3830 improvements to script launching... tree | commitdiff
2023-05-25 Ben SoaresJAL-3820 Create and use 'Jalview app' symblinks to... tree | commitdiff
2023-05-24 Ben SoaresJAL-3416 Updated flatlaf libraries. Native libraries... tree | commitdiff
2023-02-22 Ben SoaresMerge branch 'develop' into features/r2_11_2_alphafold... tree | commitdiff
2023-02-16 James ProcterMerge branch 'features/r2_11_2_alphafold/JAL-629' into... tree | commitdiff
2023-02-03 Ben SoaresJAL-629 "updated" json-simple tree | commitdiff
2023-01-16 Ben SoaresJAL-3416 More tweaking of FlatLaf. Problem with macOS... tree | commitdiff
2023-01-06 Ben SoaresJAL-3416 Upgraded FlatLaf to 3.0 and added macOS theme... tree | commitdiff
2022-06-13 Jim ProcterMerge branch 'improvement/JAL-1988+JAL-3416_Java8_macOS... tree | commitdiff
2022-06-13 Ben SoaresJAL-3416 updated FlatLAF libraries to 2.3. Added the... tree | commitdiff
2022-05-12 Ben SoaresMerge branch 'develop' into issues/JAL-3553+JAL-3978... issues/JAL-3553+JAL-3978+JAL-3989+JAL-4004_merged_with_develop tree | commitdiff
2022-05-10 Jim ProcterJAL-4008 update jabaws client to 2.2.1 - definitely... patch/JAL-4008_jabaws_2_2_1_patch tree | commitdiff
2022-03-21 Ben SoaresJAL-3416 Updated FlatLaF to 2.1 tree | commitdiff
2022-03-18 Ben SoaresJAL-3978 Using getdowninstanceappdir and getdowninstanc... tree | commitdiff
2022-03-18 Ben SoaresJAL-3978 Getdown add getdownappbase property to launche... tree | commitdiff
2022-03-09 Jalview Developmen... JAL-3796 commit jni lib in Jmol library that is signed... tree | commitdiff
2022-03-08 Ben SoaresJAL-3103 Remove BrowserLauncher2 and use Desktop.browse... tree | commitdiff
2022-03-07 Ben SoaresJAL-3103 Switched to (a wrapper around) BrowserLauncher2 tree | commitdiff
2022-03-02 Ben SoaresJAL-3691 bumped the version to 1.8.3-1.2.12 in source... benreview/JAL-3691_for_2_11_2_getdownrebuilds tree | commitdiff
2022-02-17 Jim ProcterJAL-3691 rebuilt getdown jars tree | commitdiff
2022-02-11 Jim ProcterMerge branch 'update/JAL-3949_jalview_bin_Console_to_cu... tree | commitdiff
2022-02-10 Jim ProcterMerge branch 'bug/JAL-3523_cwd_not_preserved' into... tree | commitdiff
2022-02-04 Ben SoaresJAL-3949 An attempt at converting to Log4j 2 -- no... tree | commitdiff
2022-02-03 Ben SoaresJAL-3949 upgraded log4j to 2.17.1 (no actual known... tree | commitdiff
2022-01-28 Ben SoaresMerge branch 'develop' into JAL-3416_different_look_and... tree | commitdiff
2022-01-27 Ben Soaresupdate to flatlaf 2.0.1 tree | commitdiff
2022-01-27 Jim ProcterMerge branch 'bug/JAL-3633_read_proxy_settings_from_jal... tree | commitdiff
2021-12-22 Ben SoaresJAL-3934 updated log4j from 2.16.0 to 2.17.0 tree | commitdiff
2021-12-22 Ben SoaresJAL-3934 updated log4j from 2.16.0 to 2.17.0 tree | commitdiff
2021-12-14 Ben SoaresJAL-3933 updated log4j and slf4j jars with log4j1.2... tree | commitdiff
2021-12-14 Ben SoaresJAL-3933 updated slf4j to 1.7.32 tree | commitdiff
2021-12-14 Ben SoaresJAL-3933 Updated log4j jars with log4j-2.16.0 and compa... tree | commitdiff
2021-10-04 Ben SoaresJAL-3416 updated FlatLaf to 1.6 and added some tabbed... tree | commitdiff
2021-10-04 Ben SoaresMerge branch 'develop' into JAL-3416_different_look_and... tree | commitdiff
2021-09-28 Ben SoaresJAL-3783 Updated groovy-all-2.4. Currently newer stable... tree | commitdiff
2021-09-17 Jim ProcterJAL-3874 - replace Jmol with custom build of 14.31... patch/JAL-3874_newJmolAndGradleDedup tree | commitdiff
2021-09-15 Ben SoaresJAL-3829 Fixed Jmol jar -- duplicates of other classes... tree | commitdiff
2021-09-12 Jim ProcterJAL-3829 upgrade Jmol to 14.31.53, SwingJS-JSMol to... tree | commitdiff
2021-03-25 Ben SoaresJAL-3633 new getdown jars tree | commitdiff
2021-03-25 Ben SoaresJAL-3633 new getdown jars tree | commitdiff
2021-03-19 Ben SoaresJAL-3503 New getdown version and jar files tree | commitdiff
2021-03-11 Ben SoaresJAL-3523 Advanced the getdown version number bug/JAL-3523_cwd_not_preserved tree | commitdiff
2021-03-11 Ben SoaresJAL-3523 Remove getdown setting the working directory... tree | commitdiff
2021-01-08 Ben SoaresJAL-3416 Added FlatLightLaf, use with -Dlaf=flat property tree | commitdiff
2020-12-14 Ben SoaresJAL-3783 Reverting to using groovy-all-2.4.12-indy... tree | commitdiff
2020-12-01 Ben SoaresJAL-3609 JAL-3775 Updated getdown with re-factored... tree | commitdiff
2020-11-13 Ben SoaresJAL-3775 Re-compiled Getdown jars tree | commitdiff
2020-11-06 Ben SoaresJAL-3609 New auto-scale 'formula' for linux HiDPI.... tree | commitdiff
2020-11-06 soaresJAL-3609 corrected maxdimension to mindimension. Adjust... tree | commitdiff
2020-11-06 Ben SoaresJAL-3609 changed property names to something more palat... tree | commitdiff
2020-11-06 Ben SoaresJAL-3609 system properties to force a scale, or automat... tree | commitdiff
2020-11-06 Ben SoaresJAL-3609 Added a -DforceHiDPISetting=true option mainly... tree | commitdiff
2020-09-15 Ben SoaresJAL-3718 Fixed getdown auto-update. This commit Getdown... tree | commitdiff
2020-09-14 Ben SoaresJAL-3718 force re-initialise of getdown.txt file when... tree | commitdiff
2020-09-14 Ben SoaresJAL-3609 HiDPI scale setting done via system prop in... tree | commitdiff
2020-08-18 Ben SoaresJAL-3718 Added digestonly key to getdown.txt to copy... tree | commitdiff
2020-07-27 gmungocJAL-3621 update to intervalstore v1.1 tree | commitdiff
2020-07-27 Jim ProcterJAL-3695 htsjdk 2.12 -> 2.23 (library change only,... tree | commitdiff
2020-07-27 Jim ProcterJAL-3695 htsjdk 2.12 -> 2.23 (library change only,... tree | commitdiff
2020-06-21 Ben SoaresJAL-3609 New auto-scale 'formula' for linux HiDPI.... tree | commitdiff
2020-06-08 soaresJAL-3446 new Jmol 15.1.3 jar added to j11lib, old j11li... tree | commitdiff
2020-05-22 soaresJAL-3609 corrected maxdimension to mindimension. Adjust... tree | commitdiff
2020-05-19 Ben SoaresJAL-3609 changed property names to something more palat... tree | commitdiff
2020-05-19 Ben SoaresJAL-3609 system properties to force a scale, or automat... tree | commitdiff
2020-05-19 Ben SoaresJAL-3609 Added a -DforceHiDPISetting=true option mainly... tree | commitdiff
2020-05-18 gmungocJAL-3621 update to intervalstore v1.1 tree | commitdiff
2020-05-15 Ben SoaresJAL-3609 HiDPI scale setting done via system prop in... tree | commitdiff
2020-04-06 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-04-02 Ben SoaresJAL-3572 Added getdown Implementation-Version to getdow... tree | commitdiff
2020-03-30 gmungocMerge branch 'develop' into Jalview-JS/develop tree | commitdiff
2020-03-06 Ben SoaresJAL-3394 getdown jar files had not been re-compiled tree | commitdiff
2020-02-26 Jim ProcterMerge branch 'bug/JAL-3477_memory_max_allocation' into... tree | commitdiff
2020-02-19 Ben SoaresJAL-3449 ensuring latest getdown jar files after merge tree | commitdiff
2020-02-17 Ben SoaresJAL-3252 tgz unpacking no longer needed by getdown... tree | commitdiff
2020-01-10 Ben SoaresJAL-3477 getdown jars. This commit can be left out... bug/JAL-3477_memory_max_allocation tree | commitdiff
2020-01-09 Ben SoaresJAL-3477 getdown jars. This commit can be left out... tree | commitdiff
2020-01-09 Ben SoaresJAL-3477 getdown jars. This commit can be left out... tree | commitdiff
2019-12-30 Ben SoaresJAL-3394 catch a null pointer exception, when URI not... tree | commitdiff
2019-12-18 Ben SoaresJAL-3394 Fixed jalviews?:// scheme for macOS startup tree | commitdiff
2019-12-17 Ben SoaresJAL-3394 Added a 'jalview://' and 'jalviews://' parser... tree | commitdiff
2019-12-17 Ben SoaresJAL-3449 correctly catch absence of install4j in getdow... tree | commitdiff
2019-12-16 Ben SoaresJAL-3449 don't assume install4j jar in classpath of... tree | commitdiff
2019-12-06 Ben SoaresJAL-3449 Added more versions to getdown splashscreen... tree | commitdiff
2019-11-22 Ben SoaresJAL-3449 install4j version, install4j template version... tree | commitdiff
2019-11-20 Ben SoaresJAL-3477 A bit of refactoring for the better tree | commitdiff
2019-11-20 Ben SoaresJAL-3210 cache getdown config, remove jvmmem options... tree | commitdiff
2019-11-19 Ben SoaresJAL-3210 removing overly complicated logging. Settling... tree | commitdiff
2019-11-18 Ben SoaresJAL-3477 New jvmmemmax config option in getdown and... tree | commitdiff
2019-10-08 Ben SoaresJAL-3210 replacing j11lib/Jmol-14.29.17-no_netscape... tree | commitdiff
2019-10-08 Ben SoaresJAL-3210 removed netscape.javascript objects from Jmol... tree | commitdiff
2019-07-16 gmungocJAL-3210 updated jmol jar in j8lib, j11lib tree | commitdiff
2019-07-16 gmungocJAL-3210 Merge branch 'develop' into trialMerge tree | commitdiff
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