JAL-3161 limit tooltip and status updates to visible columns
[jalview.git] / src / jalview / appletgui / AlignFrame.java
2018-03-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into...
2018-03-07 gmungocJAL-2926 fix copy group consensus (and paste sequence...
2018-01-10 gmungocJAL-1793 update spike branch to latest
2017-12-08 gmungocJAL-2843 refactor / tidy for feature filter input/output
2017-11-08 kiramtMerge branch 'develop' into feature/JAL-2759
2017-10-27 gmungocJAL-1793 spike branch updated to latest
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into...
2017-10-24 Jim ProcterMerge branch 'features/JAL-2608closeOverview' into...
2017-10-24 gmungocJAL-2738 update spike branch with latest
2017-10-12 Jim ProcterJAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview
2017-10-10 Jim ProcterMerge branch 'codereviews/JAL-1990_IProgressIndicator_j...
2017-10-03 gmungocJAL-2738 copy to spikes/mungo
2017-09-26 kiramtJAL-2674 Changes to pasting
2017-08-28 gmungocMerge branch 'bug/JAL-2687concurrentModification' into...
2017-08-28 gmungocJAL-2608 close any Overview when alignment view is...
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-07-24 gmungocspike branch updated from latest features/JAL-2446
2017-07-19 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-07-04 gmungocJAL-2608 tidy up OverviewPanel when closed
2017-06-29 gmungocJAL-147 improved wrapped scrolling (including Overview...
2017-06-27 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-06-08 kiramtJAL-2591 Refactor HiddenColumns to use ArrayList instea...
2017-06-07 kiramtJAL-2591 Further refactoring (still incomplete)
2017-06-07 kiramtJAL-2591 More rationalising of hiddencols
2017-06-07 kiramtJAL-2591 simplifying hidden columns usage
2017-05-29 gmungocMerge branch 'develop' into features/JAL-2446NCList
2017-05-23 gmungocJAL-2490 find features for export as GFF, JAL-2548...
2017-05-23 gmungocJAL-2490 tidy code and tests for feature export in...
2017-05-15 kiramtMerge remote-tracking branch 'origin/develop' into...
2017-05-11 kiramtJAL-2491 First port to applet
2017-05-05 kiramtMerge remote-tracking branch
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges
2017-04-25 kiramtJAL-2388 Working hidden regions hide/show in desktop
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection...
2017-04-07 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-04-05 gmungocJAL-2384 JAL-2371 update ResidueShader on change of...
2017-03-29 gmungocMerge branch 'develop' into bug/JAL-1608createGroups
2017-03-24 gmungocJAL-2428 use 'correct' name for selected score model
2017-03-24 gmungocJAL-1632 TreeChooser renamed CalculationChooser, text...
2017-03-24 gmungocJAL-838 move two callers off Comparison.PID and depreca...
2017-03-23 gmungocMerge branch 'develop' into features/JAL-2393customMatrices
2017-03-16 kiramtJAL-2388 Applied ViewportRanges to code
2017-02-27 kiramtJAL-2388 Make startRes,startSeq,endRes,endSeq private...
2017-02-17 gmungocJAL-2403 constants for "NJ", "AV"
2017-02-09 gmungocJAL-1608 menu entry text; enable/disable Create/Remove...
2017-02-09 gmungocJAL-2405 enable nucleotide/peptide colour schemes in...
2017-01-31 gmungocJAL-2371 rename global/viewportColourScheme to residueS...
2017-01-31 gmungocJAL-2385 more tests/bug fixes mostly for gui.SliderPane...
2017-01-23 gmungocJAL-2386 simplify changeColour (doesn't change colour...
2017-01-20 gmungocMerge branch 'features/JAL-2360colourSchemeApplicabilit...
2017-01-20 gmungocMerge branch 'develop' into features/JAL-2360colourSche...
2017-01-19 gmungocJAL-2383 restore PID colour threshold from project...
2017-01-17 gmungocMerge branch 'features/JAL-2360colourSchemeApplicabilit...
2017-01-17 gmungocMerge branch 'develop' into features/JAL-2360colourSche...
2017-01-11 gmungocJAL-2344 FileFormats singleton for formats, FileFormatI...
2017-01-05 gmungocMerge branch 'features/JAL-2360colourSchemeApplicabilit...
2017-01-05 gmungocMerge branch 'develop' into features/JAL-2360colourSche...
2017-01-04 gmungocJAL-2371 CollectionColourScheme wraps ColourSchemeI
2016-12-20 gmungocJAL-2360 ColourSchemes holds configured schemes, AlignF...
2016-12-14 Jim ProcterMerge branch 'patch/JAL-2197_jpredforjnets' into develop
2016-12-13 gmungocJAL-2361 adding items to applet colour menus, TCoffee...
2016-11-25 gmungocMerge branch 'develop' into trialMerge
2016-11-24 gmungocDistinguish text-only output formats and others (.jar...
2016-11-24 gmungocFileFormatI further tweaks, clean compile
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2016-10-24 Jim ProcterMerge branch 'releases/Release_2_10_0_Branch'
2016-10-24 Jim ProcterJAL-2197 add jpredfile as alternative form of jnetfile...
2016-10-06 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch...
2016-10-05 Jim ProcterJAL-2189 source formatting
2016-10-05 gmungocMerge branch 'develop' into task/JAL-2196pdbeProperties
2016-09-19 gmungocJAL-2172 test and code updates for readonly selection...
2016-09-13 gmungocJAL-2196 refactor PDBEntry.getProperty,setProperty...
2016-08-30 gmungocMerge branch 'develop' into features/filetypeEnum
2016-08-24 gmungocJAL-1355 correct 'thereshold' to 'threshold' in message...
2016-07-19 Jim ProcterMerge branch 'develop' into efficiency/JAL-2034_JAL...
2016-07-18 gmungocJAL-2099 ensure initial setting of scaleAbove reaches...
2016-07-12 gmungocFileFormat enum wip changes
2016-07-11 gmungocfile format enum wip changes
2016-05-10 gmungocMerge branch 'develop' into features/JAL-1956_featureStyles
2016-03-25 Jim ProcterJAL-2034 make Escape/select/deselect operations not...
2016-02-24 gmungocJAL-2015 JAL-1956 rollout of FeatureColourI in place of JAL-1956_featureStyles
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge
2016-01-11 gmungocJAL-1989 additional ways to 'mirror' show/hide columns...
2016-01-11 gmungocJAL-1989 more unit tests and encapsulation for ColumnSe...
2015-12-09 Jim ProcterJAL-1982 hotfix to prevent NPE with applet launch on...
2015-11-21 gmungocJAL-653 JAL-1968 FeaturesFile now handles Jalview or...
2015-10-22 gmungocJAL-1932 TrimRegionCommand bug fix, tests and purge...
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-10-08 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-10-07 Jim ProcterJAL-1894 source formatting
2015-10-05 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-09-28 gmungocJAL-1909 repaint complementary alignment panel after...
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-09-22 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch
2015-09-22 tcofoegbuJAL-1774 house keeping
2015-09-21 tcofoegbumerge
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