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JAL-1139 specified SHA1WithRSA for sig algorithm and removed Jmols original selfsigne...
[jalview.git]
/
src
/
jalview
/
appletgui
/
2011-02-14
jprocter
JAL-564 (annotation panel height adjustment) and alignm...
tree
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commitdiff
2011-02-14
jprocter
JAL-621 (mouseover debugging) and JAL-564 (annotation...
tree
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commitdiff
2011-02-14
jprocter
JAL-621 and JAL-564
tree
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commitdiff
2011-02-14
jprocter
JAL-621 - also renamed list of javascript handlers
tree
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commitdiff
2011-02-14
jprocter
refactored annotation panel height calculation
tree
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commitdiff
2011-02-04
jprocter
1.2ish awt methods
tree
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commitdiff
2011-02-04
jprocter
1.2ish awt methods and excluding unused code
tree
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commitdiff
2011-02-04
jprocter
don't need to retrieve idwidthadjuster
tree
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commitdiff
2011-02-04
jprocter
patch for JAL-760
tree
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commitdiff
2011-02-04
jprocter
group associated annotation and logos JAL-516 JAL-759
tree
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commitdiff
2011-02-04
jprocter
adjustable annotation panel height and vertical scrollb...
tree
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commitdiff
2011-01-21
jprocter
search result highlighting and scrolling and some patch...
tree
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commitdiff
2011-01-21
jprocter
more efficient highlighting and selection display JAL-469
tree
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commitdiff
2011-01-21
jprocter
relaxed ID matching parameter JAL-753 and sortBy JAL-754
tree
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commitdiff
2011-01-18
jprocter
patch for JAL-695 - need to test if this is observed...
tree
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commitdiff
2011-01-18
jprocter
refactored VamsasListener to allow the source of the...
tree
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commitdiff
2011-01-17
jprocter
use local reference for current target frame as set...
tree
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commitdiff
2011-01-17
jprocter
JAL-750 and JAL-451
tree
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commitdiff
2011-01-12
jprocter
1.1 compat
tree
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commitdiff
2011-01-12
jprocter
javascript callback for selection, mousover, and functi...
tree
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commitdiff
2010-12-14
jprocter
refactored and patched for JAL-721
tree
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commitdiff
2010-12-09
jprocter
refactored and added methods for getting richer Alignme...
tree
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commitdiff
2010-11-12
jprocter
patch for JAL-682 - copy over current display settings...
tree
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commitdiff
2010-11-12
jprocter
patch for JAL-699 so conservation/consensus threads...
tree
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commitdiff
2010-09-23
jprocter
revised author list
tree
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commitdiff
2010-09-23
jprocter
apply jalview code style
tree
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commitdiff
2010-09-23
jprocter
Jalview 2.6 source licence
tree
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commitdiff
2010-09-22
jprocter
jmol update
tree
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commitdiff
2010-09-14
jprocter
streamlined app and applet jmol console + event handlin...
tree
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commitdiff
2010-09-13
jprocter
refactored to remove App reference in Applet (JAL-638)
tree
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commitdiff
2010-09-13
jprocter
patched Jmol and code for embedding JmolAppConsole...
tree
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commitdiff
2010-08-31
jprocter
notes re JAL-623 and JAL-583, new api methods for addin...
tree
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commitdiff
2010-08-27
jprocter
revised sequence/structure binding so one structure...
tree
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commitdiff
2010-08-25
jprocter
correct initing of JmolViewer to avoid security excepti...
tree
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commitdiff
2010-08-25
jprocter
excluded methods related to broken Jmol applet binding...
tree
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commitdiff
2010-08-20
jprocter
complete the sequence-structure mapping details. *...
tree
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commitdiff
2010-08-20
jprocter
refactor jmol api so it doesn't clash with Swing compon...
tree
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commitdiff
2010-08-20
jprocter
refactored external structure viewer binding API calls...
tree
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commitdiff
2010-08-20
jprocter
improved debug output when Jmol viewer creation fails
tree
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commitdiff
2010-08-20
jprocter
extend jmol binding handles selection events and add...
tree
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commitdiff
2010-08-20
jprocter
binding between JalviewLite alignment windows and some...
tree
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commitdiff
2010-08-18
jprocter
1.5 annotation removal
tree
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commitdiff
2010-08-18
jprocter
refactor to abstract jmol/jalview binding and applet...
tree
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commitdiff
2010-08-18
jprocter
refactor to jalview.api methods
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commitdiff
2010-07-21
jprocter
URLs that begin with javascript: are opened in the...
tree
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commitdiff
2010-06-29
jprocter
upgrading structure/sequence binding so that a structur...
tree
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commitdiff
2010-06-29
jprocter
new ajax api methods for linking existing jmol viewers...
tree
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commitdiff
2010-06-17
jprocter
remove source annotations
tree
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commitdiff
2010-06-17
jprocter
update to Jmol series 12 (JAL-582)
tree
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commitdiff
2010-06-11
jprocter
patched for JAL-531 - only display full symbol distribu...
tree
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commitdiff
2010-06-06
jprocter
patch for JAL-542
tree
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commitdiff
2010-06-04
jprocter
correct popup menu, ensure panel doesn't disappear...
tree
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commitdiff
2010-06-04
jprocter
first patch for JAL-563 - attempt to relayout annotatio...
tree
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commitdiff
2010-06-03
jprocter
patch re JAL-554
tree
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commitdiff
2010-04-30
jprocter
sort by length
tree
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commitdiff
2010-04-30
jprocter
jalview 2.5 release banner
tree
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commitdiff
2010-04-29
jprocter
isAligned assertion (bug 0008144)
tree
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commitdiff
2010-04-29
jprocter
hide/show selected region menu entries and key bindings
tree
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commitdiff
2010-04-29
jprocter
new selection manipulation method
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commitdiff
2010-04-29
jprocter
popup menu toggles between graduated colour and single...
tree
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commitdiff
2010-04-28
jprocter
osx button colouring issue
tree
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commitdiff
2010-04-28
jprocter
find incrementally searches ID then subsequence matches...
tree
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commitdiff
2010-04-28
jprocter
make groups from selection
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commitdiff
2010-04-26
jprocter
new applet parameters: heightScale and widthScale
tree
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commitdiff
2010-04-26
jprocter
build date output in the About box, and build details...
tree
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commitdiff
2010-04-23
jprocter
fix for bug #8333
tree
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commitdiff
2010-04-23
jprocter
fix for bug #62456
tree
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commitdiff
2010-04-23
jprocter
ported logo rendering and label fit to column width...
tree
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commitdiff
2010-04-23
jprocter
ported basic elements of logo and group annotation...
tree
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commitdiff
2010-04-23
jprocter
refresh table method
tree
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commitdiff
2010-04-23
jprocter
1.1 compatibility
tree
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commitdiff
2010-04-23
jprocter
1.1 compatibility and refresh table method
tree
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commitdiff
2010-04-16
jprocter
graduated feature color editing
tree
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commitdiff
2010-04-16
jprocter
export graduated feature colors
tree
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commitdiff
2010-04-01
jprocter
todo
tree
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commitdiff
2010-02-10
jprocter
todos re adding groupUrl menu item code
tree
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commitdiff
2009-11-06
jprocter
better formed generic select residue X expression
tree
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commitdiff
2009-10-30
jprocter
na pdb: highlight any part of a residue, not just the...
tree
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commitdiff
2009-10-27
jprocter
fix null pointer exception in redraw for short sequence...
tree
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commitdiff
2009-09-03
jprocter
allow middle-button drag to change height of annotation...
tree
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commitdiff
2009-08-03
jprocter
fix feature creation for selected region beyond end...
tree
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commitdiff
2009-06-08
jprocter
apply gpl development license
tree
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commitdiff
2009-06-01
jprocter
only make a link menu when there are links
tree
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commitdiff
2009-06-01
jprocter
maxcolour is default colour for no-score features
tree
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commitdiff
2009-03-31
jprocter
added feature gradient colours and sortby feature score...
tree
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commitdiff
2009-03-17
jprocter
sortbytree parameter added and undo re-instated for...
tree
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commitdiff
2009-02-06
jprocter
showUnconserved and updated reference
tree
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commitdiff
2008-11-12
jprocter
automatic scrolling option added to view
tree
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commitdiff
2008-09-09
jprocter
tooltip contains non-positional features and popup...
tree
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commitdiff
2008-09-09
jprocter
make URL links from description string when link is...
tree
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commitdiff
2008-09-08
jprocter
introduced and commented out code for generating URLs...
tree
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commitdiff
2008-09-04
jprocter
merge from 2_4_Release branch
tree
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commitdiff
2008-08-20
jprocter
tooltip displays formatted annotation row description...
tree
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commitdiff
2008-08-19
jprocter
fix for arrayoutofbounds bug when secondary structure...
tree
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commitdiff
2008-08-19
jprocter
regex links for launching URL from single click on...
tree
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commitdiff
2008-08-13
jprocter
ensure input data can be recovered for tree and PCA...
tree
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commitdiff
2008-08-11
jprocter
regular expression based URL link generation
tree
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commitdiff
2008-08-06
jprocter
generation of additional URLs for DBRefs on a sequence...
tree
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commitdiff
2008-07-18
jprocter
Sequence label colour stored for each sequence group
tree
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commitdiff
2008-06-26
jprocter
added URLEncoder.encode to properly escape CGI encoded...
tree
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commitdiff
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