2007-03-26 |
amwaterhouse | Jmol calls user colours |
tree | commitdiff |
2007-03-26 |
amwaterhouse | Jalview colour schemes added |
tree | commitdiff |
2007-03-26 |
jprocter | fix single sequence features added rendering bug. |
tree | commitdiff |
2007-03-23 |
amwaterhouse | updates to console |
tree | commitdiff |
2007-03-23 |
amwaterhouse | slide is transparent to hidden columns |
tree | commitdiff |
2007-02-27 |
amwaterhouse | Uncomment graphics 2d bit |
tree | commitdiff |
2007-02-27 |
amwaterhouse | Use paintAlignment |
tree | commitdiff |
2007-02-27 |
amwaterhouse | jmol added |
tree | commitdiff |
2007-02-07 |
amwaterhouse | Formatting |
tree | commitdiff |
2007-02-06 |
amwaterhouse | Allow for frame insets |
tree | commitdiff |
2007-02-06 |
amwaterhouse | Format label |
tree | commitdiff |
2007-02-05 |
amwaterhouse | stop flickering annotationPanel |
tree | commitdiff |
2007-02-05 |
amwaterhouse | image is panel size |
tree | commitdiff |
2007-02-02 |
amwaterhouse | catch control down before editing null pointer |
tree | commitdiff |
2007-02-01 |
amwaterhouse | removed deprecated bits |
tree | commitdiff |
2007-02-01 |
amwaterhouse | Doesnt move with mouse, friendlier for mac users |
tree | commitdiff |
2007-02-01 |
amwaterhouse | Dont repaint tooltip |
tree | commitdiff |
2007-02-01 |
amwaterhouse | One class for edit name/description |
tree | commitdiff |
2007-01-31 |
amwaterhouse | slightly larger window edit name/desc |
tree | commitdiff |
2007-01-31 |
amwaterhouse | edit annotation name/description |
tree | commitdiff |
2007-01-31 |
amwaterhouse | Can edit annotation name/description |
tree | commitdiff |
2007-01-31 |
amwaterhouse | Dont export annotations if not visible |
tree | commitdiff |
2007-01-31 |
amwaterhouse | Unique name for new group and treegroup |
tree | commitdiff |
2007-01-30 |
amwaterhouse | Draw helices correctly |
tree | commitdiff |
2007-01-30 |
amwaterhouse | Output groups in annotation file |
tree | commitdiff |
2007-01-29 |
amwaterhouse | Dont clear graphics g before drawing the image |
tree | commitdiff |
2007-01-29 |
amwaterhouse | Image for labels, stops flickering |
tree | commitdiff |
2007-01-29 |
amwaterhouse | New view copies annotations across |
tree | commitdiff |
2007-01-29 |
amwaterhouse | Tooltips for group names, descriptions |
tree | commitdiff |
2007-01-26 |
amwaterhouse | If its null, set tip empty |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Annotations move when full alignment edited |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Remove unnecessary line |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Output annotations |
tree | commitdiff |
2007-01-24 |
amwaterhouse | output now takes alignment, not just sequences |
tree | commitdiff |
2007-01-24 |
jprocter | refactored to use jalview.analysis.Finder for searching... |
tree | commitdiff |
2007-01-23 |
amwaterhouse | Hidden representatives moved from sequence to viewport |
tree | commitdiff |
2007-01-19 |
amwaterhouse | export features/annotations not for import |
tree | commitdiff |
2007-01-19 |
amwaterhouse | Applet can output and load annotations, features |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Tool tip for annotation description |
tree | commitdiff |
2007-01-18 |
amwaterhouse | File Parsing returns Alignments, not Sequence[] |
tree | commitdiff |
2007-01-17 |
amwaterhouse | Edit name/description added to applet |
tree | commitdiff |
2007-01-17 |
amwaterhouse | Fit to Window bug fixed |
tree | commitdiff |
2007-01-17 |
amwaterhouse | Dont set the font of alignFrameMenubarcvs update applet... |
tree | commitdiff |
2007-01-04 |
amwaterhouse | Send new sequences when firing alignment changed |
tree | commitdiff |
2006-12-21 |
amwaterhouse | getSequenceAsString |
tree | commitdiff |
2006-12-06 |
jprocter | typo fix. |
tree | commitdiff |
2006-12-06 |
jprocter | general pairwise substitution score models for pairwise... |
tree | commitdiff |
2006-12-05 |
amwaterhouse | Set startRes 0 for switch to wrap view |
tree | commitdiff |
2006-12-05 |
amwaterhouse | sequence is char [] |
tree | commitdiff |
2006-11-27 |
amwaterhouse | Allow new window from output sequences |
tree | commitdiff |
2006-11-24 |
amwaterhouse | Invert col sel with hidden cols bug fixed |
tree | commitdiff |
2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
tree | commitdiff |
2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
tree | commitdiff |
2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
tree | commitdiff |
2006-11-23 |
amwaterhouse | Transparency...... |
tree | commitdiff |
2006-11-23 |
amwaterhouse | If alignment is closed, then undo performed in visible... |
tree | commitdiff |
2006-11-22 |
amwaterhouse | View name |
tree | commitdiff |
2006-11-22 |
amwaterhouse | applet has multiple views |
tree | commitdiff |
2006-11-21 |
amwaterhouse | Seq may be null if hide has occurred |
tree | commitdiff |
2006-11-21 |
amwaterhouse | Copy to this implemented |
tree | commitdiff |
2006-11-21 |
amwaterhouse | Set start seq and end seq correctly |
tree | commitdiff |
2006-11-21 |
amwaterhouse | Add more keys |
tree | commitdiff |
2006-11-21 |
amwaterhouse | Change case new implementation |
tree | commitdiff |
2006-11-21 |
amwaterhouse | Transparency available again |
tree | commitdiff |
2006-11-20 |
amwaterhouse | check cursor is visible for hidden cols |
tree | commitdiff |
2006-11-20 |
amwaterhouse | look for current alignframe to search |
tree | commitdiff |
2006-11-20 |
amwaterhouse | embeddedMenus |
tree | commitdiff |
2006-11-15 |
amwaterhouse | dont adjust aligments if they're the same size |
tree | commitdiff |
2006-11-15 |
amwaterhouse | Add remove seq from multiple views, must fire alignment... |
tree | commitdiff |
2006-11-15 |
amwaterhouse | IdMask must be Max seq end, not seq width |
tree | commitdiff |
2006-11-14 |
amwaterhouse | Commands, history, consensus, refresh updated |
tree | commitdiff |
2006-11-13 |
amwaterhouse | Colours in viewport |
tree | commitdiff |
2006-11-09 |
amwaterhouse | Cutandpaste used for input/output |
tree | commitdiff |
2006-10-26 |
amwaterhouse | Dont scroll off width-1 |
tree | commitdiff |
2006-10-24 |
amwaterhouse | Commented out for compilation |
tree | commitdiff |
2006-10-18 |
amwaterhouse | draw text after linkimage |
tree | commitdiff |
2006-10-18 |
amwaterhouse | Remove system.out |
tree | commitdiff |
2006-10-12 |
amwaterhouse | Use i, not index if not representedSeqs |
tree | commitdiff |
2006-10-12 |
amwaterhouse | Local adjustForhiddenSeqs routine |
tree | commitdiff |
2006-10-12 |
amwaterhouse | RepresentGroup count items |
tree | commitdiff |
2006-10-10 |
amwaterhouse | Only getGroups once if groupEditingcvs update |
tree | commitdiff |
2006-10-10 |
amwaterhouse | Use AAFrequency final keys |
tree | commitdiff |
2006-10-10 |
amwaterhouse | SetTooltip empty |
tree | commitdiff |
2006-10-09 |
jprocter | set firstColumn property for an alignmentView object. |
tree | commitdiff |
2006-10-06 |
amwaterhouse | AAFrequency optimized |
tree | commitdiff |
2006-10-05 |
amwaterhouse | DEFAULT_WIDTH |
tree | commitdiff |
2006-10-03 |
amwaterhouse | BoldFont upperCase |
tree | commitdiff |
2006-10-03 |
amwaterhouse | Remove empty() from feature ToolTip |
tree | commitdiff |
2006-10-03 |
amwaterhouse | Check selection scroll beyond aligmnment height |
tree | commitdiff |
2006-10-03 |
amwaterhouse | Check on vscrollMax values |
tree | commitdiff |
2006-10-03 |
amwaterhouse | upperCaseBold |
tree | commitdiff |
2006-10-03 |
amwaterhouse | TurnColour bug on popupmenu applet |
tree | commitdiff |
2006-09-27 |
jprocter | fixed tree building exception when one residue or a... |
tree | commitdiff |
2006-09-18 |
amwaterhouse | Draw hidden column marker correctly |
tree | commitdiff |
2006-09-18 |
amwaterhouse | click node to select sequences |
tree | commitdiff |
2006-09-12 |
amwaterhouse | hideSequence hide all before recalc consensus |
tree | commitdiff |
2006-09-12 |
amwaterhouse | For now ignore middle mouse font resize on Mac applet |
tree | commitdiff |
2006-09-12 |
amwaterhouse | Allow alt button for Mac applet group editing |
tree | commitdiff |
2006-09-07 |
jprocter | added copy consensus sequence to consensus annotation... |
tree | commitdiff |
2006-09-01 |
amwaterhouse | Dont look for middle mouse on the Mac |
tree | commitdiff |
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