sequence groups carry their own conservation and consensus annotation rows
[jalview.git] / src / jalview / appletgui /
2009-06-08 jprocterapply gpl development license
2009-06-01 jprocteronly make a link menu when there are links
2009-06-01 jproctermaxcolour is default colour for no-score features
2009-03-31 jprocteradded feature gradient colours and sortby feature score...
2009-03-17 jproctersortbytree parameter added and undo re-instated for...
2009-02-06 jproctershowUnconserved and updated reference
2008-11-12 jprocterautomatic scrolling option added to view
2008-09-09 jproctertooltip contains non-positional features and popup...
2008-09-09 jproctermake URL links from description string when link is...
2008-09-08 jprocterintroduced and commented out code for generating URLs...
2008-09-04 jproctermerge from 2_4_Release branch
2008-08-20 jproctertooltip displays formatted annotation row description...
2008-08-19 jprocterfix for arrayoutofbounds bug when secondary structure...
2008-08-19 jprocterregex links for launching URL from single click on...
2008-08-13 jprocterensure input data can be recovered for tree and PCA...
2008-08-11 jprocterregular expression based URL link generation
2008-08-06 jproctergeneration of additional URLs for DBRefs on a sequence...
2008-07-18 jprocterSequence label colour stored for each sequence group
2008-06-26 jprocteradded URLEncoder.encode to properly escape CGI encoded...
2008-05-02 jprocterbugfix to avoid null pointer exceptions being raised...
2008-04-21 jproctercentrecolumnlabels format menu item and parameter added...
2008-04-10 jprocterbug fix for Features/Annotations file parameter parsing...
2007-12-18 jprocterincorrect colour-by-sequence when gaps are present...
2007-11-16 jproctertodo for sortbyPID operating on current selection rathe...
2007-11-08 jprocterinitialise treeCanvas before starting loading thread
2007-10-28 jprocterbegin process of allowing for column selection in wrapp...
2007-10-28 jprocterfix display of hidden sequence markers in applet
2007-10-27 jproctermust do any modification to menus before they are embed...
2007-10-27 jprocterenabled platform dependent embedding of menuBar with...
2007-10-27 jprocterfixed bootstrap value rendering to occur only when...
2007-10-27 jprocterrefactored embedded menu machinery
2007-10-26 jprocteradd mac dependent use of embedded menu bar rather than...
2007-10-26 jprocteruse new utility class for platform info
2007-10-15 jprocternew features or newly shown group features are placed...
2007-10-10 jprocterfeatureGroup show/hide and newView methods for applet...
2007-09-06 jprocterfixes bootstrap bug noted by Chunlong Chen in email...
2007-08-06 jprocternull pointer exception blocked redraw of annotation...
2007-08-01 jprocteradded tree as an applet to application servlet parameter
2007-07-13 jprocterpickmanager on sequence and alignment position, vamsas...
2007-06-18 jprocterensure lines are drawn from first alignment column.
2007-05-22 amwaterhouseDONT SET PICKING LABEL
2007-05-15 amwaterhouseSequenceListener highlights SearchResults, not just...
2007-05-08 amwaterhouseset picking label
2007-05-08 amwaterhouseinstant update when seq colour is pressed
2007-05-08 amwaterhousemust specify .CA
2007-05-08 amwaterhousesmall sphere for alpha carbon
2007-05-07 amwaterhouseDont use gold colouring for highlight
2007-05-04 amwaterhouselastCommand check
2007-05-03 amwaterhouseoptimize repaints
2007-05-02 amwaterhouseconvert space to gapchar
2007-05-02 jprocterrefactored do and undo() method to take array of alignm...
2007-05-01 amwaterhousesetVisible flag sent to EditNameDialog
2007-05-01 amwaterhouseuse jalviewLite to addFrame
2007-05-01 amwaterhouseMultiple views/hidden region/undo out of index bug
2007-05-01 amwaterhouseCan specify PDB chain to map sequence to - only used...
2007-04-30 amwaterhousesetVisible replaces show
2007-04-27 amwaterhouseREmove excessive painting
2007-04-27 amwaterhouseRepaint after feature added
2007-04-27 amwaterhousePrevent err when editing and overview drawing
2007-04-27 amwaterhouseMake sure mainContainer and owner are not null
2007-04-27 amwaterhouseMust check that featureGroup is visible for mouse over...
2007-04-27 amwaterhouseamendFeatures
2007-04-27 amwaterhousepaintAlignment(true)
2007-04-27 amwaterhousePlace new feature on top of existing features
2007-04-27 amwaterhouseMake sure sequence is in mouse over alignment
2007-04-27 amwaterhouseAmend Features
2007-04-27 amwaterhousealigned boxes
2007-04-27 amwaterhouseThresholdIsMin available in applet
2007-04-27 amwaterhouseSet black if colour null
2007-04-27 amwaterhouseAlignment properties available
2007-04-26 amwaterhouseAlignment Properties required for annotation file
2007-04-25 amwaterhouseExport annotations with properties
2007-04-25 jprocterAlignmentAnnotation: added annotation score attribute...
2007-04-23 amwaterhousegetColour method added
2007-04-19 amwaterhouseREPLACE added to edit command
2007-04-18 amwaterhousehastext = false
2007-04-18 amwaterhousequality has text false
2007-04-17 jprocterbugfix for jalviewApplet run from command line.
2007-04-17 amwaterhouseApplet remembers PDBEntries, can launch multiple struct...
2007-04-17 amwaterhouseRemove system.out
2007-04-16 amwaterhousedrawSequence must be synchronized
2007-04-12 amwaterhouseNumber pad keys can be used in cursor mode
2007-04-11 amwaterhouseSetTargetColour before dialog.show
2007-04-11 amwaterhouseAmend features/annotations in applet
2007-04-11 amwaterhouseUsed several places
2007-04-02 jprocterfeaturesAdded method introduced for consistency with...
2007-03-26 amwaterhouseJmol calls user colours
2007-03-26 amwaterhouseJalview colour schemes added
2007-03-26 jprocterfix single sequence features added rendering bug.
2007-03-23 amwaterhouseupdates to console
2007-03-23 amwaterhouseslide is transparent to hidden columns
2007-02-27 amwaterhouseUncomment graphics 2d bit
2007-02-27 amwaterhouseUse paintAlignment
2007-02-27 amwaterhousejmol added
2007-02-07 amwaterhouseFormatting
2007-02-06 amwaterhouseAllow for frame insets
2007-02-06 amwaterhouseFormat label
2007-02-05 amwaterhousestop flickering annotationPanel
2007-02-05 amwaterhouseimage is panel size
2007-02-02 amwaterhousecatch control down before editing null pointer
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