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[jalview.git]
/
src
/
jalview
/
appletgui
/
2010-08-20
jprocter
extend jmol binding handles selection events and add...
tree
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commitdiff
2010-08-20
jprocter
binding between JalviewLite alignment windows and some...
tree
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commitdiff
2010-08-18
jprocter
1.5 annotation removal
tree
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commitdiff
2010-08-18
jprocter
refactor to abstract jmol/jalview binding and applet...
tree
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commitdiff
2010-08-18
jprocter
refactor to jalview.api methods
tree
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commitdiff
2010-07-21
jprocter
URLs that begin with javascript: are opened in the...
tree
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commitdiff
2010-06-29
jprocter
upgrading structure/sequence binding so that a structur...
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commitdiff
2010-06-29
jprocter
new ajax api methods for linking existing jmol viewers...
tree
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commitdiff
2010-06-17
jprocter
remove source annotations
tree
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commitdiff
2010-06-17
jprocter
update to Jmol series 12 (JAL-582)
tree
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commitdiff
2010-06-11
jprocter
patched for JAL-531 - only display full symbol distribu...
tree
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commitdiff
2010-06-06
jprocter
patch for JAL-542
tree
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commitdiff
2010-06-04
jprocter
correct popup menu, ensure panel doesn't disappear...
tree
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commitdiff
2010-06-04
jprocter
first patch for JAL-563 - attempt to relayout annotatio...
tree
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commitdiff
2010-06-03
jprocter
patch re JAL-554
tree
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commitdiff
2010-04-30
jprocter
sort by length
tree
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commitdiff
2010-04-30
jprocter
jalview 2.5 release banner
tree
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commitdiff
2010-04-29
jprocter
isAligned assertion (bug 0008144)
tree
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commitdiff
2010-04-29
jprocter
hide/show selected region menu entries and key bindings
tree
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commitdiff
2010-04-29
jprocter
new selection manipulation method
tree
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commitdiff
2010-04-29
jprocter
popup menu toggles between graduated colour and single...
tree
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commitdiff
2010-04-28
jprocter
osx button colouring issue
tree
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commitdiff
2010-04-28
jprocter
find incrementally searches ID then subsequence matches...
tree
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commitdiff
2010-04-28
jprocter
make groups from selection
tree
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commitdiff
2010-04-26
jprocter
new applet parameters: heightScale and widthScale
tree
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commitdiff
2010-04-26
jprocter
build date output in the About box, and build details...
tree
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commitdiff
2010-04-23
jprocter
fix for bug #8333
tree
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commitdiff
2010-04-23
jprocter
fix for bug #62456
tree
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commitdiff
2010-04-23
jprocter
ported logo rendering and label fit to column width...
tree
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commitdiff
2010-04-23
jprocter
ported basic elements of logo and group annotation...
tree
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commitdiff
2010-04-23
jprocter
refresh table method
tree
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commitdiff
2010-04-23
jprocter
1.1 compatibility
tree
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commitdiff
2010-04-23
jprocter
1.1 compatibility and refresh table method
tree
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commitdiff
2010-04-16
jprocter
graduated feature color editing
tree
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commitdiff
2010-04-16
jprocter
export graduated feature colors
tree
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commitdiff
2010-04-01
jprocter
todo
tree
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commitdiff
2010-02-10
jprocter
todos re adding groupUrl menu item code
tree
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commitdiff
2009-11-06
jprocter
better formed generic select residue X expression
tree
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commitdiff
2009-10-30
jprocter
na pdb: highlight any part of a residue, not just the...
tree
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commitdiff
2009-10-27
jprocter
fix null pointer exception in redraw for short sequence...
tree
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commitdiff
2009-09-03
jprocter
allow middle-button drag to change height of annotation...
tree
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commitdiff
2009-08-03
jprocter
fix feature creation for selected region beyond end...
tree
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commitdiff
2009-06-08
jprocter
apply gpl development license
tree
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commitdiff
2009-06-01
jprocter
only make a link menu when there are links
tree
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commitdiff
2009-06-01
jprocter
maxcolour is default colour for no-score features
tree
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commitdiff
2009-03-31
jprocter
added feature gradient colours and sortby feature score...
tree
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commitdiff
2009-03-17
jprocter
sortbytree parameter added and undo re-instated for...
tree
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commitdiff
2009-02-06
jprocter
showUnconserved and updated reference
tree
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commitdiff
2008-11-12
jprocter
automatic scrolling option added to view
tree
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commitdiff
2008-09-09
jprocter
tooltip contains non-positional features and popup...
tree
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commitdiff
2008-09-09
jprocter
make URL links from description string when link is...
tree
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commitdiff
2008-09-08
jprocter
introduced and commented out code for generating URLs...
tree
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commitdiff
2008-09-04
jprocter
merge from 2_4_Release branch
tree
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commitdiff
2008-08-20
jprocter
tooltip displays formatted annotation row description...
tree
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commitdiff
2008-08-19
jprocter
fix for arrayoutofbounds bug when secondary structure...
tree
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commitdiff
2008-08-19
jprocter
regex links for launching URL from single click on...
tree
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commitdiff
2008-08-13
jprocter
ensure input data can be recovered for tree and PCA...
tree
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commitdiff
2008-08-11
jprocter
regular expression based URL link generation
tree
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commitdiff
2008-08-06
jprocter
generation of additional URLs for DBRefs on a sequence...
tree
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commitdiff
2008-07-18
jprocter
Sequence label colour stored for each sequence group
tree
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commitdiff
2008-06-26
jprocter
added URLEncoder.encode to properly escape CGI encoded...
tree
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commitdiff
2008-05-02
jprocter
bugfix to avoid null pointer exceptions being raised...
tree
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commitdiff
2008-04-21
jprocter
centrecolumnlabels format menu item and parameter added...
tree
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commitdiff
2008-04-10
jprocter
bug fix for Features/Annotations file parameter parsing...
tree
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commitdiff
2007-12-18
jprocter
incorrect colour-by-sequence when gaps are present...
tree
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commitdiff
2007-11-16
jprocter
todo for sortbyPID operating on current selection rathe...
tree
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commitdiff
2007-11-08
jprocter
initialise treeCanvas before starting loading thread
tree
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commitdiff
2007-10-28
jprocter
begin process of allowing for column selection in wrapp...
tree
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commitdiff
2007-10-28
jprocter
fix display of hidden sequence markers in applet
tree
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commitdiff
2007-10-27
jprocter
must do any modification to menus before they are embed...
tree
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commitdiff
2007-10-27
jprocter
enabled platform dependent embedding of menuBar with...
tree
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commitdiff
2007-10-27
jprocter
fixed bootstrap value rendering to occur only when...
tree
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commitdiff
2007-10-27
jprocter
refactored embedded menu machinery
tree
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commitdiff
2007-10-26
jprocter
add mac dependent use of embedded menu bar rather than...
tree
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commitdiff
2007-10-26
jprocter
use new utility class for platform info
tree
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commitdiff
2007-10-15
jprocter
new features or newly shown group features are placed...
tree
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commitdiff
2007-10-10
jprocter
featureGroup show/hide and newView methods for applet...
tree
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commitdiff
2007-09-06
jprocter
fixes bootstrap bug noted by Chunlong Chen in email...
tree
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commitdiff
2007-08-06
jprocter
null pointer exception blocked redraw of annotation...
tree
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commitdiff
2007-08-01
jprocter
added tree as an applet to application servlet parameter
tree
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commitdiff
2007-07-13
jprocter
pickmanager on sequence and alignment position, vamsas...
tree
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commitdiff
2007-06-18
jprocter
ensure lines are drawn from first alignment column.
tree
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commitdiff
2007-05-22
amwaterhouse
DONT SET PICKING LABEL
tree
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commitdiff
2007-05-15
amwaterhouse
SequenceListener highlights SearchResults, not just...
tree
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commitdiff
2007-05-08
amwaterhouse
set picking label
tree
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commitdiff
2007-05-08
amwaterhouse
instant update when seq colour is pressed
tree
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commitdiff
2007-05-08
amwaterhouse
must specify .CA
tree
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commitdiff
2007-05-08
amwaterhouse
small sphere for alpha carbon
tree
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commitdiff
2007-05-07
amwaterhouse
Dont use gold colouring for highlight
tree
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commitdiff
2007-05-04
amwaterhouse
lastCommand check
tree
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commitdiff
2007-05-03
amwaterhouse
optimize repaints
tree
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commitdiff
2007-05-02
amwaterhouse
convert space to gapchar
tree
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commitdiff
2007-05-02
jprocter
refactored do and undo() method to take array of alignm...
tree
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commitdiff
2007-05-01
amwaterhouse
setVisible flag sent to EditNameDialog
tree
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commitdiff
2007-05-01
amwaterhouse
use jalviewLite to addFrame
tree
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commitdiff
2007-05-01
amwaterhouse
Multiple views/hidden region/undo out of index bug
tree
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commitdiff
2007-05-01
amwaterhouse
Can specify PDB chain to map sequence to - only used...
tree
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commitdiff
2007-04-30
amwaterhouse
setVisible replaces show
tree
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commitdiff
2007-04-27
amwaterhouse
REmove excessive painting
tree
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commitdiff
2007-04-27
amwaterhouse
Repaint after feature added
tree
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commitdiff
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